RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 CARMIL3Q8ND23 1372 aa15.73■□□□□ 0.11
HDGFL3-204ENST00000563790 USP50Q70EL3 339 aaPredicted RBP15.72■□□□□ 0.11
HDGFL3-204ENST00000563790 FZD9O00144 591 aa15.71■□□□□ 0.11
HDGFL3-204ENST00000563790 SOGA3Q5TF21 947 aa15.71■□□□□ 0.11
HDGFL3-204ENST00000563790 CCDC24Q8N4L8 307 aa15.71■□□□□ 0.11
HDGFL3-204ENST00000563790 ZNF296Q8WUU4 475 aaPredicted RBP15.71■□□□□ 0.11
HDGFL3-204ENST00000563790 ZNF622Q969S3 477 aaKnown RBP eCLIP15.71■□□□□ 0.114e-6■■□□□ 13.5
HDGFL3-204ENST00000563790 ATG3Q9NT62 314 aa15.71■□□□□ 0.11
HDGFL3-204ENST00000563790 TMOD3Q9NYL9 352 aa15.71■□□□□ 0.11
HDGFL3-204ENST00000563790 TATP17735 454 aaPredicted RBP15.7■□□□□ 0.1
HDGFL3-204ENST00000563790 HUNKP57058 714 aa15.7■□□□□ 0.1
HDGFL3-204ENST00000563790 NKX1-1Q15270 411 aaPredicted RBP15.7■□□□□ 0.1
HDGFL3-204ENST00000563790 ANKRD13DQ6ZTN6 518 aa15.7■□□□□ 0.1
HDGFL3-204ENST00000563790 PDZRN3Q9UPQ7 1066 aa15.7■□□□□ 0.1
HDGFL3-204ENST00000563790 KTN1Q86UP2 1357 aaKnown RBP15.7■□□□□ 0.1
HDGFL3-204ENST00000563790 ANKRD26Q9UPS8 1709 aa15.69■□□□□ 0.1
HDGFL3-204ENST00000563790 SOX1O00570 391 aaPredicted RBP15.69■□□□□ 0.1
HDGFL3-204ENST00000563790 EN2P19622 333 aaPredicted RBP15.69■□□□□ 0.1
HDGFL3-204ENST00000563790 LMOD1P29536 600 aaPredicted RBP15.69■□□□□ 0.1
HDGFL3-204ENST00000563790 NFIXQ14938 502 aa15.68■□□□□ 0.1
HDGFL3-204ENST00000563790 NBPF6Q5VWK0 638 aa15.68■□□□□ 0.1
HDGFL3-204ENST00000563790 CCDC102AQ96A19 550 aa15.68■□□□□ 0.1
HDGFL3-204ENST00000563790 NBPF4Q96M43 638 aa15.68■□□□□ 0.1
HDGFL3-204ENST00000563790 CSRNP1Q96S65 589 aa15.68■□□□□ 0.1
HDGFL3-204ENST00000563790 EPS15P42566 896 aa15.67■□□□□ 0.1
HDGFL3-204ENST00000563790 RGMBQ6NW40 437 aa15.67■□□□□ 0.1
HDGFL3-204ENST00000563790 LRCH3Q96II8 777 aa15.67■□□□□ 0.1
HDGFL3-204ENST00000563790 SERPINB2P05120 415 aa15.66■□□□□ 0.1
HDGFL3-204ENST00000563790 SCNN1DP51172 638 aa15.66■□□□□ 0.1
HDGFL3-204ENST00000563790 TJP1Q07157 1748 aa15.65■□□□□ 0.1
HDGFL3-204ENST00000563790 A0A1W2PPC1 479 aa15.65■□□□□ 0.1
HDGFL3-204ENST00000563790 GPR153Q6NV75 609 aa15.65■□□□□ 0.1
HDGFL3-204ENST00000563790 NME9Q86XW9 330 aa15.65■□□□□ 0.1
HDGFL3-204ENST00000563790 GLIS2Q9BZE0 524 aaPredicted RBP15.65■□□□□ 0.1
HDGFL3-204ENST00000563790 ZNF408Q9H9D4 720 aa15.65■□□□□ 0.1
HDGFL3-204ENST00000563790 HOXC9P31274 260 aa15.64■□□□□ 0.09
HDGFL3-204ENST00000563790 NOM1Q5C9Z4 860 aaKnown RBP15.64■□□□□ 0.09
HDGFL3-204ENST00000563790 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.64■□□□□ 0.09
HDGFL3-204ENST00000563790 REM2Q8IYK8 340 aaPredicted RBP15.64■□□□□ 0.09
HDGFL3-204ENST00000563790 USHBP1Q8N6Y0 703 aa15.64■□□□□ 0.09
HDGFL3-204ENST00000563790 KDM2AQ9Y2K7 1162 aa15.64■□□□□ 0.09
HDGFL3-204ENST00000563790 CENPJQ9HC77 1338 aaPredicted RBP15.64■□□□□ 0.09
HDGFL3-204ENST00000563790 USPL1Q5W0Q7 1092 aa15.63■□□□□ 0.09
HDGFL3-204ENST00000563790 PRPF40BQ6NWY9 871 aaKnown RBP15.63■□□□□ 0.09
HDGFL3-204ENST00000563790 STAC3Q96MF2 364 aa15.63■□□□□ 0.09
HDGFL3-204ENST00000563790 MPHOSPH9Q99550 1183 aa15.63■□□□□ 0.09
HDGFL3-204ENST00000563790 ZNF277Q9NRM2 450 aaPredicted RBP15.63■□□□□ 0.09
HDGFL3-204ENST00000563790 MUC6Q6W4X9 2439 aa15.63■□□□□ 0.09
HDGFL3-204ENST00000563790 ZPR1O75312 459 aa15.62■□□□□ 0.09
HDGFL3-204ENST00000563790 FKBP4Q02790 459 aaKnown RBP eCLIP15.62■□□□□ 0.09
HDGFL3-204ENST00000563790 DEFB123Q8N688 67 aa15.62■□□□□ 0.09
HDGFL3-204ENST00000563790 CNKSR1Q969H4 720 aa15.62■□□□□ 0.09
HDGFL3-204ENST00000563790 RBM42Q9BTD8 480 aaKnown RBP15.62■□□□□ 0.09
HDGFL3-204ENST00000563790 PDE6BP35913 854 aa15.61■□□□□ 0.09
HDGFL3-204ENST00000563790 CRKLP46109 303 aaKnown RBP15.61■□□□□ 0.09
HDGFL3-204ENST00000563790 CCDC93Q567U6 631 aa15.6■□□□□ 0.09
HDGFL3-204ENST00000563790 DCAF11Q8TEB1 546 aa15.6■□□□□ 0.09
HDGFL3-204ENST00000563790 C7orf43Q8WVR3 580 aa15.6■□□□□ 0.09
HDGFL3-204ENST00000563790 PGAP2Q9UHJ9 254 aa15.6■□□□□ 0.09
HDGFL3-204ENST00000563790 SYNGAP1Q96PV0 1343 aa15.6■□□□□ 0.09
HDGFL3-204ENST00000563790 SBNO2Q9Y2G9 1366 aa15.6■□□□□ 0.09
HDGFL3-204ENST00000563790 SLC10A3P09131 477 aa15.59■□□□□ 0.09
HDGFL3-204ENST00000563790 ZNF157P51786 506 aaPredicted RBP15.59■□□□□ 0.09
HDGFL3-204ENST00000563790 BRIP1Q9BX63 1249 aa15.59■□□□□ 0.09
HDGFL3-204ENST00000563790 GJA3Q9Y6H8 435 aa15.59■□□□□ 0.09
HDGFL3-204ENST00000563790 GPR25O00155 361 aa15.58■□□□□ 0.08
HDGFL3-204ENST00000563790 IARSP41252 1262 aaKnown RBP15.57■□□□□ 0.08
HDGFL3-204ENST00000563790 STYK1Q6J9G0 422 aa15.57■□□□□ 0.08
HDGFL3-204ENST00000563790 ADARB2Q9NS39 739 aaKnown RBP15.57■□□□□ 0.08
HDGFL3-204ENST00000563790 MTMR10Q9NXD2 777 aa15.57■□□□□ 0.08
HDGFL3-204ENST00000563790 COL4A5P29400 1685 aa15.57■□□□□ 0.08
HDGFL3-204ENST00000563790 TBC1D8O95759 1140 aa15.56■□□□□ 0.08
HDGFL3-204ENST00000563790 ARMC5Q96C12 935 aa15.56■□□□□ 0.08
HDGFL3-204ENST00000563790 CACNA1GO43497 2377 aa15.56■□□□□ 0.08
HDGFL3-204ENST00000563790 CDC37L1Q7L3B6 337 aa15.55■□□□□ 0.08
HDGFL3-204ENST00000563790 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
HDGFL3-204ENST00000563790 PKD1L2Q7Z442 2459 aa15.54■□□□□ 0.08
HDGFL3-204ENST00000563790 RTL1A6NKG5 1358 aa15.54■□□□□ 0.08
HDGFL3-204ENST00000563790 EVC2Q86UK5 1308 aa15.54■□□□□ 0.08
HDGFL3-204ENST00000563790 AMPHP49418 695 aa15.54■□□□□ 0.08
HDGFL3-204ENST00000563790 EIF6P56537 245 aaKnown RBP15.54■□□□□ 0.08
HDGFL3-204ENST00000563790 Q7L0L9 218 aa15.54■□□□□ 0.08
HDGFL3-204ENST00000563790 ZC3H15Q8WU90 426 aaKnown RBP15.54■□□□□ 0.08
HDGFL3-204ENST00000563790 NARFQ9UHQ1 456 aa15.54■□□□□ 0.08
HDGFL3-204ENST00000563790 FKTNO75072 461 aa15.53■□□□□ 0.08
HDGFL3-204ENST00000563790 JDP2Q8WYK2 163 aa15.53■□□□□ 0.08
HDGFL3-204ENST00000563790 BCL2L12Q9HB09 334 aa15.53■□□□□ 0.08
HDGFL3-204ENST00000563790 KDM3BQ7LBC6 1761 aa15.52■□□□□ 0.08
HDGFL3-204ENST00000563790 SRGNP10124 158 aa15.52■□□□□ 0.08
HDGFL3-204ENST00000563790 GBA2Q9HCG7 927 aaPredicted RBP15.52■□□□□ 0.08
HDGFL3-204ENST00000563790 GPRC5DQ9NZD1 345 aa15.52■□□□□ 0.08
HDGFL3-204ENST00000563790 INTS5Q6P9B9 1019 aaKnown RBP15.51■□□□□ 0.07
HDGFL3-204ENST00000563790 RTKN2Q8IZC4 609 aa15.51■□□□□ 0.07
HDGFL3-204ENST00000563790 TMEM106CQ9BVX2 250 aa15.51■□□□□ 0.07
HDGFL3-204ENST00000563790 C2orf69Q8N8R5 385 aa15.5■□□□□ 0.07
HDGFL3-204ENST00000563790 MASTLQ96GX5 879 aa15.5■□□□□ 0.07
HDGFL3-204ENST00000563790 SOS1Q07889 1333 aaPredicted RBP15.49■□□□□ 0.07
HDGFL3-204ENST00000563790 SPG7Q9UQ90 795 aa15.49■□□□□ 0.07
HDGFL3-204ENST00000563790 EDC4Q6P2E9 1401 aaKnown RBP15.49■□□□□ 0.07
HDGFL3-204ENST00000563790 MAP3K12Q12852 859 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 293.3 ms