RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 METTL22Q9BUU2 404 aaPredicted RBP12.01□□□□□ -0.49
SMG1-205ENST00000561947 NEURL1BA8MQ27 555 aa12.01□□□□□ -0.49
SMG1-205ENST00000561947 ERVV-2B6SEH9 535 aa12.01□□□□□ -0.49
SMG1-205ENST00000561947 GSE1Q14687 1217 aa12.01□□□□□ -0.49
SMG1-205ENST00000561947 NKX1-1Q15270 411 aaPredicted RBP12.01□□□□□ -0.49
SMG1-205ENST00000561947 UNC5CLQ8IV45 518 aa12.01□□□□□ -0.49
SMG1-205ENST00000561947 PI4K2BQ8TCG2 481 aa12.01□□□□□ -0.49
SMG1-205ENST00000561947 KAZALD1Q96I82 304 aa12.01□□□□□ -0.49
SMG1-205ENST00000561947 CIZ1Q9ULV3 898 aaPredicted RBP12.01□□□□□ -0.49
SMG1-205ENST00000561947 USP42Q9H9J4 1324 aaKnown RBP12□□□□□ -0.49
SMG1-205ENST00000561947 ERC1Q8IUD2 1116 aa12□□□□□ -0.49
SMG1-205ENST00000561947 MYD88Q99836 296 aa12□□□□□ -0.49
SMG1-205ENST00000561947 ANKRD13DQ6ZTN6 518 aa12□□□□□ -0.49
SMG1-205ENST00000561947 BICC1Q9H694 974 aaKnown RBP12□□□□□ -0.49
SMG1-205ENST00000561947 KCPQ6ZWJ8 1503 aa11.99□□□□□ -0.49
SMG1-205ENST00000561947 GCKRQ14397 625 aa11.99□□□□□ -0.49
SMG1-205ENST00000561947 STRN4Q9NRL3 753 aa11.99□□□□□ -0.49
SMG1-205ENST00000561947 ERBB4Q15303 1308 aa11.99□□□□□ -0.49
SMG1-205ENST00000561947 TTC41PQ6P2S7 1318 aa11.99□□□□□ -0.49
SMG1-205ENST00000561947 EVA1CP58658 441 aa11.99□□□□□ -0.49
SMG1-205ENST00000561947 CLASRPQ8N2M8 674 aaKnown RBP11.99□□□□□ -0.49
SMG1-205ENST00000561947 PA2G4Q9UQ80 394 aaKnown RBP11.99□□□□□ -0.49
SMG1-205ENST00000561947 TOGARAM1Q9Y4F4 1720 aa11.99□□□□□ -0.49
SMG1-205ENST00000561947 HSP90AA1P07900 732 aaKnown RBP11.98□□□□□ -0.49
SMG1-205ENST00000561947 PIP4K2AP48426 406 aaPredicted RBP11.98□□□□□ -0.49
SMG1-205ENST00000561947 MCM4P33991 863 aa11.98□□□□□ -0.49
SMG1-205ENST00000561947 NUP188Q5SRE5 1749 aa11.97□□□□□ -0.49
SMG1-205ENST00000561947 ST18O60284 1047 aa11.97□□□□□ -0.49
SMG1-205ENST00000561947 GLRX3O76003 335 aaKnown RBP11.97□□□□□ -0.49
SMG1-205ENST00000561947 MCCP23508 829 aa11.97□□□□□ -0.49
SMG1-205ENST00000561947 CNTROBQ8N137 903 aa11.97□□□□□ -0.49
SMG1-205ENST00000561947 TNS2Q63HR2 1409 aa11.97□□□□□ -0.49
SMG1-205ENST00000561947 COL15A1P39059 1388 aa11.96□□□□□ -0.49
SMG1-205ENST00000561947 PLBD2Q8NHP8 589 aa11.96□□□□□ -0.49
SMG1-205ENST00000561947 DDX54Q8TDD1 881 aaKnown RBP11.96□□□□□ -0.49
SMG1-205ENST00000561947 ANO2Q9NQ90 1003 aa11.96□□□□□ -0.49
SMG1-205ENST00000561947 COL14A1Q05707 1796 aaKnown RBP11.96□□□□□ -0.49
SMG1-205ENST00000561947 EPB41L2O43491 1005 aaKnown RBP11.96□□□□□ -0.5
SMG1-205ENST00000561947 MAP4K4O95819 1239 aaPredicted RBP11.96□□□□□ -0.5
SMG1-205ENST00000561947 G3BP1Q13283 466 aaKnown RBP eCLIP11.96□□□□□ -0.5
SMG1-205ENST00000561947 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
SMG1-205ENST00000561947 IFIT2P09913 472 aaKnown RBP11.95□□□□□ -0.5
SMG1-205ENST00000561947 RAB3GAP1Q15042 981 aa11.95□□□□□ -0.5
SMG1-205ENST00000561947 NBPF14Q5TI25 921 aa11.95□□□□□ -0.5
SMG1-205ENST00000561947 NBPF10Q6P3W6 841 aaKnown RBP11.95□□□□□ -0.5
SMG1-205ENST00000561947 NBPF15Q8N660 670 aa11.95□□□□□ -0.5
SMG1-205ENST00000561947 GPATCH3Q96I76 525 aa11.95□□□□□ -0.5
SMG1-205ENST00000561947 ECHDC1Q9NTX5 307 aa11.95□□□□□ -0.5
SMG1-205ENST00000561947 FOXD4L1Q9NU39 408 aa11.95□□□□□ -0.5
SMG1-205ENST00000561947 SASH1O94885 1247 aa11.95□□□□□ -0.5
SMG1-205ENST00000561947 ANAPC15P60006 121 aa11.95□□□□□ -0.5
SMG1-205ENST00000561947 EPHA10Q5JZY3 1008 aa11.95□□□□□ -0.5
SMG1-205ENST00000561947 IL17RAQ96F46 866 aa11.95□□□□□ -0.5
SMG1-205ENST00000561947 ROBO1Q9Y6N7 1651 aa11.95□□□□□ -0.5
SMG1-205ENST00000561947 AACSQ86V21 672 aa11.94□□□□□ -0.5
SMG1-205ENST00000561947 COL22A1Q8NFW1 1626 aaPredicted RBP11.94□□□□□ -0.5
SMG1-205ENST00000561947 TNPO1Q92973 898 aaKnown RBP11.94□□□□□ -0.5
SMG1-205ENST00000561947 IL25Q9H293 177 aa11.94□□□□□ -0.5
SMG1-205ENST00000561947 AHDC1Q5TGY3 1603 aaPredicted RBP11.94□□□□□ -0.5
SMG1-205ENST00000561947 TJP1Q07157 1748 aa11.94□□□□□ -0.5
SMG1-205ENST00000561947 SGSM2O43147 1006 aa11.94□□□□□ -0.5
SMG1-205ENST00000561947 ITGB4P16144 1822 aa11.93□□□□□ -0.5
SMG1-205ENST00000561947 ATP5J2-PTCD1G3V325 749 aa11.93□□□□□ -0.5
SMG1-205ENST00000561947 PTCD1O75127 700 aaKnown RBP11.93□□□□□ -0.5
SMG1-205ENST00000561947 RABL6Q3YEC7 729 aaPredicted RBP11.93□□□□□ -0.5
SMG1-205ENST00000561947 UBE3BQ7Z3V4 1068 aa11.93□□□□□ -0.5
SMG1-205ENST00000561947 BTG4Q9NY30 223 aa11.93□□□□□ -0.5
SMG1-205ENST00000561947 PALD1Q9ULE6 856 aa11.93□□□□□ -0.5
SMG1-205ENST00000561947 PLCH1Q4KWH8 1693 aa11.93□□□□□ -0.5
SMG1-205ENST00000561947 DDX11L8A8MPP1 907 aa11.93□□□□□ -0.5
SMG1-205ENST00000561947 PRKCSHP14314 528 aaPredicted RBP11.93□□□□□ -0.5
SMG1-205ENST00000561947 CASP7P55210 303 aa11.93□□□□□ -0.5
SMG1-205ENST00000561947 EAF2Q96CJ1 260 aaPredicted RBP11.93□□□□□ -0.5
SMG1-205ENST00000561947 SIL1Q9H173 461 aa11.93□□□□□ -0.5
SMG1-205ENST00000561947 COPRSQ9NQ92 184 aa11.93□□□□□ -0.5
SMG1-205ENST00000561947 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.93□□□□□ -0.5
SMG1-205ENST00000561947 COL16A1Q07092 1604 aaPredicted RBP11.92□□□□□ -0.5
SMG1-205ENST00000561947 A0A087WZG4 1122 aa11.92□□□□□ -0.5
SMG1-205ENST00000561947 A1BGP04217 495 aa11.92□□□□□ -0.5
SMG1-205ENST00000561947 RFX5P48382 616 aaPredicted RBP11.92□□□□□ -0.5
SMG1-205ENST00000561947 JARID2Q92833 1246 aaPredicted RBP11.92□□□□□ -0.5
SMG1-205ENST00000561947 TMOD3Q9NYL9 352 aa11.92□□□□□ -0.5
SMG1-205ENST00000561947 DISP2A7MBM2 1401 aa11.92□□□□□ -0.5
SMG1-205ENST00000561947 WNK3Q9BYP7 1800 aa11.92□□□□□ -0.5
SMG1-205ENST00000561947 HSPA4P34932 840 aa11.92□□□□□ -0.5
SMG1-205ENST00000561947 NEK4P51957 841 aa11.92□□□□□ -0.5
SMG1-205ENST00000561947 TTLL7Q6ZT98 887 aa11.92□□□□□ -0.5
SMG1-205ENST00000561947 KLHDC4Q8TBB5 520 aa11.92□□□□□ -0.5
SMG1-205ENST00000561947 GBP4Q96PP9 640 aa11.92□□□□□ -0.5
SMG1-205ENST00000561947 RAD50Q92878 1312 aa11.92□□□□□ -0.5
SMG1-205ENST00000561947 MCM2P49736 904 aa11.91□□□□□ -0.5
SMG1-205ENST00000561947 EVI5LQ96CN4 794 aa11.91□□□□□ -0.5
SMG1-205ENST00000561947 LSG1Q9H089 658 aaKnown RBP11.91□□□□□ -0.5
SMG1-205ENST00000561947 CCDC8Q9H0W5 538 aaPredicted RBP11.91□□□□□ -0.5
SMG1-205ENST00000561947 DIAPH3Q9NSV4 1193 aa11.91□□□□□ -0.5
SMG1-205ENST00000561947 H7C1W4 665 aa11.9□□□□□ -0.5
SMG1-205ENST00000561947 PTPN12Q05209 780 aaKnown RBP11.9□□□□□ -0.5
SMG1-205ENST00000561947 RUFY2Q8WXA3 655 aa11.9□□□□□ -0.5
SMG1-205ENST00000561947 CWC22Q9HCG8 908 aaKnown RBP11.9□□□□□ -0.5
SMG1-205ENST00000561947 SSFA2P28290 1259 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms