RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 KIF6Q6ZMV9 814 aa11.69□□□□□ -0.54
SNRPA1-214ENST00000560987 SETDB2Q96T68 719 aa11.69□□□□□ -0.54
SNRPA1-214ENST00000560987 CD2APQ9Y5K6 639 aa11.69□□□□□ -0.54
SNRPA1-214ENST00000560987 SERPINB2P05120 415 aa11.68□□□□□ -0.54
SNRPA1-214ENST00000560987 ZNF853P0CG23 659 aa11.68□□□□□ -0.54
SNRPA1-214ENST00000560987 NFIXQ14938 502 aa11.68□□□□□ -0.54
SNRPA1-214ENST00000560987 TBC1D9BQ66K14 1250 aa11.68□□□□□ -0.54
SNRPA1-214ENST00000560987 WDR63Q8IWG1 891 aa11.68□□□□□ -0.54
SNRPA1-214ENST00000560987 ZNF784Q8NCA9 323 aaPredicted RBP11.68□□□□□ -0.54
SNRPA1-214ENST00000560987 NLGN2Q8NFZ4 835 aa11.68□□□□□ -0.54
SNRPA1-214ENST00000560987 ZNF652Q9Y2D9 606 aa11.68□□□□□ -0.54
SNRPA1-214ENST00000560987 FAM177BA6PVY3 158 aa11.67□□□□□ -0.54
SNRPA1-214ENST00000560987 PITPNM1O00562 1244 aa11.67□□□□□ -0.54
SNRPA1-214ENST00000560987 ANXA1P04083 346 aa11.67□□□□□ -0.54
SNRPA1-214ENST00000560987 HDGFL1Q5TGJ6 251 aa11.67□□□□□ -0.54
SNRPA1-214ENST00000560987 TSR2Q969E8 191 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-214ENST00000560987 BCL2L12Q9HB09 334 aa11.67□□□□□ -0.54
SNRPA1-214ENST00000560987 WWC3Q9ULE0 1092 aa11.67□□□□□ -0.54
SNRPA1-214ENST00000560987 KDM3BQ7LBC6 1761 aa11.67□□□□□ -0.54
SNRPA1-214ENST00000560987 A0A0G2JLW4 131 aa11.66□□□□□ -0.54
SNRPA1-214ENST00000560987 CAMTA2O94983 1202 aa11.66□□□□□ -0.54
SNRPA1-214ENST00000560987 GTF2E1P29083 439 aaPredicted RBP11.66□□□□□ -0.54
SNRPA1-214ENST00000560987 CLEC4GQ6UXB4 293 aa11.66□□□□□ -0.54
SNRPA1-214ENST00000560987 C8orf58Q8NAV2 365 aa11.66□□□□□ -0.54
SNRPA1-214ENST00000560987 CHMP4AQ9BY43 222 aa11.66□□□□□ -0.54
SNRPA1-214ENST00000560987 ZBTB3Q9H5J0 574 aa11.66□□□□□ -0.54
SNRPA1-214ENST00000560987 CICQ96RK0 1608 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-214ENST00000560987 POLRMTO00411 1230 aaKnown RBP11.65□□□□□ -0.54
SNRPA1-214ENST00000560987 DDR1Q08345 913 aa11.65□□□□□ -0.54
SNRPA1-214ENST00000560987 GOLGA2Q08379 1002 aa11.65□□□□□ -0.54
SNRPA1-214ENST00000560987 HLFQ16534 295 aa11.65□□□□□ -0.54
SNRPA1-214ENST00000560987 TTLL7Q6ZT98 887 aa11.65□□□□□ -0.54
SNRPA1-214ENST00000560987 COPS6Q7L5N1 327 aa11.65□□□□□ -0.54
SNRPA1-214ENST00000560987 DDX21Q9NR30 783 aaKnown RBP eCLIP11.65□□□□□ -0.54
SNRPA1-214ENST00000560987 CHPF2Q9P2E5 772 aa11.65□□□□□ -0.54
SNRPA1-214ENST00000560987 NIP7Q9Y221 180 aaKnown RBP eCLIP11.65□□□□□ -0.54
SNRPA1-214ENST00000560987 IL16Q14005 1332 aa11.64□□□□□ -0.55
SNRPA1-214ENST00000560987 ERBB4Q15303 1308 aa11.64□□□□□ -0.55
SNRPA1-214ENST00000560987 C4AP0C0L4 1744 aa11.64□□□□□ -0.55
SNRPA1-214ENST00000560987 ERVV-1B6SEH8 477 aa11.64□□□□□ -0.55
SNRPA1-214ENST00000560987 HOXB7P09629 217 aa11.64□□□□□ -0.55
SNRPA1-214ENST00000560987 TGFB2P61812 414 aa11.64□□□□□ -0.55
SNRPA1-214ENST00000560987 PDIA6Q15084 440 aa11.64□□□□□ -0.55
SNRPA1-214ENST00000560987 PROSER3Q2NL68 480 aa11.64□□□□□ -0.55
SNRPA1-214ENST00000560987 CCDC30Q5VVM6 783 aa11.64□□□□□ -0.55
SNRPA1-214ENST00000560987 NBPF5PQ86XG9 351 aaPredicted RBP11.64□□□□□ -0.55
SNRPA1-214ENST00000560987 CCDC24Q8N4L8 307 aa11.64□□□□□ -0.55
SNRPA1-214ENST00000560987 XAGE3Q8WTP9 111 aa11.64□□□□□ -0.55
SNRPA1-214ENST00000560987 MYH16Q9H6N6 1097 aa11.64□□□□□ -0.55
SNRPA1-214ENST00000560987 DBF4Q9UBU7 674 aaPredicted RBP11.64□□□□□ -0.55
SNRPA1-214ENST00000560987 MAP3K15Q6ZN16 1313 aa11.63□□□□□ -0.55
SNRPA1-214ENST00000560987 TCERG1O14776 1098 aaKnown RBP11.63□□□□□ -0.55
SNRPA1-214ENST00000560987 DPEP1P16444 411 aa11.63□□□□□ -0.55
SNRPA1-214ENST00000560987 GPTP24298 496 aa11.63□□□□□ -0.55
SNRPA1-214ENST00000560987 TWISTNBQ3B726 338 aaPredicted RBP11.63□□□□□ -0.55
SNRPA1-214ENST00000560987 TPTE2Q6XPS3 522 aa11.63□□□□□ -0.55
SNRPA1-214ENST00000560987 TSPYL6Q8N831 410 aa11.63□□□□□ -0.55
SNRPA1-214ENST00000560987 HYPKQ9NX55 129 aa11.63□□□□□ -0.55
SNRPA1-214ENST00000560987 ZBTB12Q9Y330 459 aaPredicted RBP11.63□□□□□ -0.55
SNRPA1-214ENST00000560987 ST5P78524 1137 aa11.62□□□□□ -0.55
SNRPA1-214ENST00000560987 STK31Q9BXU1 1019 aa11.62□□□□□ -0.55
SNRPA1-214ENST00000560987 COL24A1Q17RW2 1714 aa11.62□□□□□ -0.55
SNRPA1-214ENST00000560987 H0YIN7 160 aa11.61□□□□□ -0.55
SNRPA1-214ENST00000560987 CHRNA5P30532 468 aa11.61□□□□□ -0.55
SNRPA1-214ENST00000560987 EXOSC9Q06265 439 aaKnown RBP11.61□□□□□ -0.55
SNRPA1-214ENST00000560987 GIGYF2Q6Y7W6 1299 aaKnown RBP11.61□□□□□ -0.55
SNRPA1-214ENST00000560987 ANKRD13DQ6ZTN6 518 aa11.61□□□□□ -0.55
SNRPA1-214ENST00000560987 RIC3Q7Z5B4 369 aa11.61□□□□□ -0.55
SNRPA1-214ENST00000560987 C2CD5Q86YS7 1000 aa11.61□□□□□ -0.55
SNRPA1-214ENST00000560987 CNBD1Q8NA66 436 aa11.61□□□□□ -0.55
SNRPA1-214ENST00000560987 ZNF622Q969S3 477 aaKnown RBP eCLIP11.61□□□□□ -0.55
SNRPA1-214ENST00000560987 PIM2Q9P1W9 311 aa11.61□□□□□ -0.55
SNRPA1-214ENST00000560987 BCS1LQ9Y276 419 aa11.61□□□□□ -0.55
SNRPA1-214ENST00000560987 CARMIL3Q8ND23 1372 aa11.6□□□□□ -0.55
SNRPA1-214ENST00000560987 MYCNP04198 464 aaPredicted RBP11.6□□□□□ -0.55
SNRPA1-214ENST00000560987 PDE6BP35913 854 aa11.6□□□□□ -0.55
SNRPA1-214ENST00000560987 PPP1R42Q7Z4L9 355 aa11.6□□□□□ -0.55
SNRPA1-214ENST00000560987 NYXQ9GZU5 481 aa11.6□□□□□ -0.55
SNRPA1-214ENST00000560987 PHAXQ9H814 394 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-214ENST00000560987 FANCIQ9NVI1 1328 aa11.6□□□□□ -0.55
SNRPA1-214ENST00000560987 LAMB4A4D0S4 1761 aa11.59□□□□□ -0.55
SNRPA1-214ENST00000560987 RGL2O15211 777 aa11.59□□□□□ -0.55
SNRPA1-214ENST00000560987 DDX58O95786 925 aaKnown RBP11.59□□□□□ -0.55
SNRPA1-214ENST00000560987 YBX3P16989 372 aaKnown RBP eCLIP11.59□□□□□ -0.55
SNRPA1-214ENST00000560987 C1QTNF8P60827 252 aa11.59□□□□□ -0.55
SNRPA1-214ENST00000560987 HSP90AB3PQ58FF7 597 aa11.59□□□□□ -0.55
SNRPA1-214ENST00000560987 PRR5LQ6MZQ0 368 aa11.59□□□□□ -0.55
SNRPA1-214ENST00000560987 PLBD2Q8NHP8 589 aa11.59□□□□□ -0.55
SNRPA1-214ENST00000560987 ZNF428Q96B54 188 aa11.59□□□□□ -0.55
SNRPA1-214ENST00000560987 BRIP1Q9BX63 1249 aa11.59□□□□□ -0.55
SNRPA1-214ENST00000560987 VAMP4O75379 141 aa11.58□□□□□ -0.56
SNRPA1-214ENST00000560987 TCIRG1Q13488 830 aa11.58□□□□□ -0.56
SNRPA1-214ENST00000560987 DALRD3Q5D0E6 543 aaKnown RBP11.58□□□□□ -0.56
SNRPA1-214ENST00000560987 SUSD4Q5VX71 490 aa11.58□□□□□ -0.56
SNRPA1-214ENST00000560987 ARHGAP27Q6ZUM4 889 aa11.58□□□□□ -0.56
SNRPA1-214ENST00000560987 UTRNP46939 3433 aa11.57□□□□□ -0.56
SNRPA1-214ENST00000560987 E9PSI1 815 aa11.57□□□□□ -0.56
SNRPA1-214ENST00000560987 ATP5J2-PTCD1G3V325 749 aa11.57□□□□□ -0.56
SNRPA1-214ENST00000560987 HNRNPUQ00839 825 aaKnown RBP eCLIP11.57□□□□□ -0.56
SNRPA1-214ENST00000560987 PARP10Q53GL7 1025 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms