RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 NFIXQ14938 502 aa20.12■□□□□ 0.81
RABGGTA-219ENST00000560871 DUSP27Q5VZP5 1158 aa20.12■□□□□ 0.81
RABGGTA-219ENST00000560871 DZIP3Q86Y13 1208 aaKnown RBP20.12■□□□□ 0.81
RABGGTA-219ENST00000560871 SPINK5Q9NQ38 1064 aaPredicted RBP20.12■□□□□ 0.81
RABGGTA-219ENST00000560871 TBC1D2BQ9UPU7 963 aa20.12■□□□□ 0.81
RABGGTA-219ENST00000560871 KCNA3P22001 575 aa20.11■□□□□ 0.81
RABGGTA-219ENST00000560871 C8orf58Q8NAV2 365 aa20.11■□□□□ 0.81
RABGGTA-219ENST00000560871 UTRNP46939 3433 aa20.11■□□□□ 0.81
RABGGTA-219ENST00000560871 PROSER3Q2NL68 480 aa20.1■□□□□ 0.81
RABGGTA-219ENST00000560871 HDGFL1Q5TGJ6 251 aa20.1■□□□□ 0.81
RABGGTA-219ENST00000560871 MYL6BP14649 208 aa20.09■□□□□ 0.81
RABGGTA-219ENST00000560871 NPM2Q86SE8 214 aaKnown RBP20.09■□□□□ 0.81
RABGGTA-219ENST00000560871 RGL2O15211 777 aa20.08■□□□□ 0.81
RABGGTA-219ENST00000560871 ANXA1P04083 346 aa20.08■□□□□ 0.81
RABGGTA-219ENST00000560871 SERPINB2P05120 415 aa20.08■□□□□ 0.81
RABGGTA-219ENST00000560871 TSPYL6Q8N831 410 aa20.08■□□□□ 0.81
RABGGTA-219ENST00000560871 NECTIN2Q92692 538 aa20.08■□□□□ 0.81
RABGGTA-219ENST00000560871 BCS1LQ9Y276 419 aa20.08■□□□□ 0.81
RABGGTA-219ENST00000560871 TTLL7Q6ZT98 887 aa20.07■□□□□ 0.8
RABGGTA-219ENST00000560871 DDX21Q9NR30 783 aaKnown RBP eCLIP20.07■□□□□ 0.8
RABGGTA-219ENST00000560871 CHPF2Q9P2E5 772 aa20.07■□□□□ 0.8
RABGGTA-219ENST00000560871 DLEC1Q9Y238 1755 aa20.07■□□□□ 0.8
RABGGTA-219ENST00000560871 GOLGB1Q14789 3259 aaKnown RBP20.07■□□□□ 0.8
RABGGTA-219ENST00000560871 ELL2O00472 640 aaPredicted RBP20.06■□□□□ 0.8
RABGGTA-219ENST00000560871 TBC1D9BQ66K14 1250 aa20.06■□□□□ 0.8
RABGGTA-219ENST00000560871 PIM2Q9P1W9 311 aa20.06■□□□□ 0.8
RABGGTA-219ENST00000560871 MAP3K15Q6ZN16 1313 aa20.05■□□□□ 0.8
RABGGTA-219ENST00000560871 ADCY9O60503 1353 aa20.05■□□□□ 0.8
RABGGTA-219ENST00000560871 ANKRD31Q8N7Z5 1873 aa20.05■□□□□ 0.8
RABGGTA-219ENST00000560871 CHRNA5P30532 468 aa20.04■□□□□ 0.8
RABGGTA-219ENST00000560871 CLEC4GQ6UXB4 293 aa20.04■□□□□ 0.8
RABGGTA-219ENST00000560871 BICDL1Q6ZP65 573 aa20.04■□□□□ 0.8
RABGGTA-219ENST00000560871 DBF4Q9UBU7 674 aaPredicted RBP20.04■□□□□ 0.8
RABGGTA-219ENST00000560871 CARMIL3Q8ND23 1372 aa20.04■□□□□ 0.8
RABGGTA-219ENST00000560871 ATP10DQ9P241 1426 aa20.03■□□□□ 0.8
RABGGTA-219ENST00000560871 ERVV-1B6SEH8 477 aa20.03■□□□□ 0.8
RABGGTA-219ENST00000560871 HLFQ16534 295 aa20.03■□□□□ 0.8
RABGGTA-219ENST00000560871 TWISTNBQ3B726 338 aaPredicted RBP20.03■□□□□ 0.8
RABGGTA-219ENST00000560871 KIF6Q6ZMV9 814 aa20.03■□□□□ 0.8
RABGGTA-219ENST00000560871 MYH16Q9H6N6 1097 aa20.03■□□□□ 0.8
RABGGTA-219ENST00000560871 ZNF652Q9Y2D9 606 aa20.03■□□□□ 0.8
RABGGTA-219ENST00000560871 GOLGA2Q08379 1002 aa20.02■□□□□ 0.8
RABGGTA-219ENST00000560871 NUP98P52948 1817 aa20.02■□□□□ 0.79
RABGGTA-219ENST00000560871 EXOSC9Q06265 439 aaKnown RBP20.01■□□□□ 0.79
RABGGTA-219ENST00000560871 DALRD3Q5D0E6 543 aaKnown RBP20.01■□□□□ 0.79
RABGGTA-219ENST00000560871 ARHGAP27Q6ZUM4 889 aa20.01■□□□□ 0.79
RABGGTA-219ENST00000560871 COPS6Q7L5N1 327 aa20.01■□□□□ 0.79
RABGGTA-219ENST00000560871 XAGE3Q8WTP9 111 aa20.01■□□□□ 0.79
RABGGTA-219ENST00000560871 ZBTB3Q9H5J0 574 aa20.01■□□□□ 0.79
RABGGTA-219ENST00000560871 ANKRD36CQ5JPF3 1778 aa20■□□□□ 0.79
RABGGTA-219ENST00000560871 E9PSI1 815 aa19.99■□□□□ 0.79
RABGGTA-219ENST00000560871 SLFN5Q08AF3 891 aa19.99■□□□□ 0.79
RABGGTA-219ENST00000560871 CCDC30Q5VVM6 783 aa19.99■□□□□ 0.79
RABGGTA-219ENST00000560871 SETDB2Q96T68 719 aa19.99■□□□□ 0.79
RABGGTA-219ENST00000560871 HYPKQ9NX55 129 aa19.99■□□□□ 0.79
RABGGTA-219ENST00000560871 VAMP4O75379 141 aa19.98■□□□□ 0.79
RABGGTA-219ENST00000560871 PRR5LQ6MZQ0 368 aa19.98■□□□□ 0.79
RABGGTA-219ENST00000560871 GIGYF2Q6Y7W6 1299 aaKnown RBP19.98■□□□□ 0.79
RABGGTA-219ENST00000560871 CHMP4AQ9BY43 222 aa19.98■□□□□ 0.79
RABGGTA-219ENST00000560871 SBF1O95248 1867 aa19.98■□□□□ 0.79
RABGGTA-219ENST00000560871 UBN2Q6ZU65 1347 aa19.98■□□□□ 0.79
RABGGTA-219ENST00000560871 ARFGEF2Q9Y6D5 1785 aa19.98■□□□□ 0.79
RABGGTA-219ENST00000560871 AIMP1Q12904 312 aaKnown RBP19.97■□□□□ 0.79
RABGGTA-219ENST00000560871 CDCA7LQ96GN5 454 aa19.97■□□□□ 0.79
RABGGTA-219ENST00000560871 BRIP1Q9BX63 1249 aa19.97■□□□□ 0.79
RABGGTA-219ENST00000560871 NIP7Q9Y221 180 aaKnown RBP eCLIP19.97■□□□□ 0.79
RABGGTA-219ENST00000560871 IBTKQ9P2D0 1353 aaPredicted RBP19.96■□□□□ 0.79
RABGGTA-219ENST00000560871 COL11A2P13942 1736 aaPredicted RBP19.96■□□□□ 0.79
RABGGTA-219ENST00000560871 H0YIN7 160 aa19.96■□□□□ 0.79
RABGGTA-219ENST00000560871 C2CD5Q86YS7 1000 aa19.96■□□□□ 0.79
RABGGTA-219ENST00000560871 TRMT2AQ8IZ69 625 aaKnown RBP19.96■□□□□ 0.79
RABGGTA-219ENST00000560871 PHAXQ9H814 394 aaKnown RBP19.96■□□□□ 0.79
RABGGTA-219ENST00000560871 C1QTNF8P60827 252 aa19.95■□□□□ 0.78
RABGGTA-219ENST00000560871 ZNF34Q8IZ26 560 aa19.95■□□□□ 0.78
RABGGTA-219ENST00000560871 PDZRN3Q9UPQ7 1066 aa19.95■□□□□ 0.78
RABGGTA-219ENST00000560871 PDE6BP35913 854 aa19.94■□□□□ 0.78
RABGGTA-219ENST00000560871 HNRNPUQ00839 825 aaKnown RBP eCLIP19.94■□□□□ 0.78
RABGGTA-219ENST00000560871 CCDC24Q8N4L8 307 aa19.94■□□□□ 0.78
RABGGTA-219ENST00000560871 TTLL6Q8N841 843 aa19.94■□□□□ 0.78
RABGGTA-219ENST00000560871 CNBD1Q8NA66 436 aa19.94■□□□□ 0.78
RABGGTA-219ENST00000560871 PLBD2Q8NHP8 589 aa19.94■□□□□ 0.78
RABGGTA-219ENST00000560871 GPBP1L1Q9HC44 474 aaPredicted RBP19.94■□□□□ 0.78
RABGGTA-219ENST00000560871 TCERG1O14776 1098 aaKnown RBP19.93■□□□□ 0.78
RABGGTA-219ENST00000560871 ANKRD13DQ6ZTN6 518 aa19.93■□□□□ 0.78
RABGGTA-219ENST00000560871 STK31Q9BXU1 1019 aa19.93■□□□□ 0.78
RABGGTA-219ENST00000560871 TNRC6CQ9HCJ0 1690 aaKnown RBP19.92■□□□□ 0.78
RABGGTA-219ENST00000560871 GPTP24298 496 aa19.92■□□□□ 0.78
RABGGTA-219ENST00000560871 HSP90AB3PQ58FF7 597 aa19.92■□□□□ 0.78
RABGGTA-219ENST00000560871 NBPF5PQ86XG9 351 aaPredicted RBP19.92■□□□□ 0.78
RABGGTA-219ENST00000560871 CACNA1SQ13698 1873 aa19.92■□□□□ 0.78
RABGGTA-219ENST00000560871 CCDC88AQ3V6T2 1871 aa19.92■□□□□ 0.78
RABGGTA-219ENST00000560871 RIC1Q4ADV7 1423 aa19.92■□□□□ 0.78
RABGGTA-219ENST00000560871 ST5P78524 1137 aa19.91■□□□□ 0.78
RABGGTA-219ENST00000560871 TCIRG1Q13488 830 aa19.91■□□□□ 0.78
RABGGTA-219ENST00000560871 G2E3Q7L622 706 aa19.91■□□□□ 0.78
RABGGTA-219ENST00000560871 ZNF526Q8TF50 670 aaPredicted RBP19.91■□□□□ 0.78
RABGGTA-219ENST00000560871 ABCC12Q96J65 1359 aa19.91■□□□□ 0.78
RABGGTA-219ENST00000560871 NTSR2O95665 410 aa19.9■□□□□ 0.78
RABGGTA-219ENST00000560871 C9orf131Q5VYM1 1079 aa19.9■□□□□ 0.78
RABGGTA-219ENST00000560871 NPHP1O15259 732 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms