RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 SETDB2Q96T68 719 aa18.43■□□□□ 0.54
TNFAIP2-207ENST00000560562 TIAM2Q8IVF5 1701 aa18.42■□□□□ 0.54
TNFAIP2-207ENST00000560562 C1QTNF8P60827 252 aa18.41■□□□□ 0.54
TNFAIP2-207ENST00000560562 CLEC4GQ6UXB4 293 aa18.41■□□□□ 0.54
TNFAIP2-207ENST00000560562 TTLL7Q6ZT98 887 aa18.41■□□□□ 0.54
TNFAIP2-207ENST00000560562 NGEFQ8N5V2 710 aa18.41■□□□□ 0.54
TNFAIP2-207ENST00000560562 CNBD1Q8NA66 436 aa18.41■□□□□ 0.54
TNFAIP2-207ENST00000560562 ANKRD36CQ5JPF3 1778 aa18.41■□□□□ 0.54
TNFAIP2-207ENST00000560562 DICER1Q9UPY3 1922 aaKnown RBP18.41■□□□□ 0.54
TNFAIP2-207ENST00000560562 MYL6BP14649 208 aa18.4■□□□□ 0.54
TNFAIP2-207ENST00000560562 PRELPP51888 382 aa18.4■□□□□ 0.54
TNFAIP2-207ENST00000560562 LMOD3Q0VAK6 560 aa18.4■□□□□ 0.54
TNFAIP2-207ENST00000560562 KRT24Q2M2I5 525 aa18.4■□□□□ 0.54
TNFAIP2-207ENST00000560562 LRP10Q7Z4F1 713 aa18.4■□□□□ 0.54
TNFAIP2-207ENST00000560562 BRIP1Q9BX63 1249 aa18.4■□□□□ 0.54
TNFAIP2-207ENST00000560562 H0YIN7 160 aa18.4■□□□□ 0.54
TNFAIP2-207ENST00000560562 RASSF7Q02833 373 aa18.4■□□□□ 0.54
TNFAIP2-207ENST00000560562 PDIA6Q15084 440 aa18.4■□□□□ 0.54
TNFAIP2-207ENST00000560562 GPBP1L1Q9HC44 474 aaPredicted RBP18.4■□□□□ 0.54
TNFAIP2-207ENST00000560562 PROSER3Q2NL68 480 aa18.39■□□□□ 0.53
TNFAIP2-207ENST00000560562 C9orf131Q5VYM1 1079 aa18.39■□□□□ 0.53
TNFAIP2-207ENST00000560562 TTLL6Q8N841 843 aa18.39■□□□□ 0.53
TNFAIP2-207ENST00000560562 NIP7Q9Y221 180 aaKnown RBP eCLIP18.39■□□□□ 0.53
TNFAIP2-207ENST00000560562 ZNF652Q9Y2D9 606 aa18.39■□□□□ 0.53
TNFAIP2-207ENST00000560562 CHL1O00533 1208 aa18.38■□□□□ 0.53
TNFAIP2-207ENST00000560562 RGL2O15211 777 aa18.38■□□□□ 0.53
TNFAIP2-207ENST00000560562 ANXA1P04083 346 aa18.38■□□□□ 0.53
TNFAIP2-207ENST00000560562 BABAM1Q9NWV8 329 aa18.38■□□□□ 0.53
TNFAIP2-207ENST00000560562 MAP3K15Q6ZN16 1313 aa18.37■□□□□ 0.53
TNFAIP2-207ENST00000560562 PDE6BP35913 854 aa18.37■□□□□ 0.53
TNFAIP2-207ENST00000560562 NBPF5PQ86XG9 351 aaPredicted RBP18.37■□□□□ 0.53
TNFAIP2-207ENST00000560562 ABCC12Q96J65 1359 aa18.36■□□□□ 0.53
TNFAIP2-207ENST00000560562 FAM177BA6PVY3 158 aa18.36■□□□□ 0.53
TNFAIP2-207ENST00000560562 NFKBIEO00221 500 aa18.36■□□□□ 0.53
TNFAIP2-207ENST00000560562 EIF2S2P20042 333 aaKnown RBP18.36■□□□□ 0.53
TNFAIP2-207ENST00000560562 ST5P78524 1137 aa18.36■□□□□ 0.53
TNFAIP2-207ENST00000560562 ZNF622Q969S3 477 aaKnown RBP eCLIP18.36■□□□□ 0.534e-8■■■□□ 16.4
TNFAIP2-207ENST00000560562 ZBTB3Q9H5J0 574 aa18.36■□□□□ 0.53
TNFAIP2-207ENST00000560562 ERBB4Q15303 1308 aa18.36■□□□□ 0.53
TNFAIP2-207ENST00000560562 UBN2Q6ZU65 1347 aa18.36■□□□□ 0.53
TNFAIP2-207ENST00000560562 ZNF316A6NFI3 1004 aaPredicted RBP18.35■□□□□ 0.53
TNFAIP2-207ENST00000560562 APAF1O14727 1248 aa18.35■□□□□ 0.53
TNFAIP2-207ENST00000560562 KIF3CO14782 793 aa18.35■□□□□ 0.53
TNFAIP2-207ENST00000560562 SRGNP10124 158 aa18.35■□□□□ 0.53
TNFAIP2-207ENST00000560562 NECTIN2Q92692 538 aa18.35■□□□□ 0.53
TNFAIP2-207ENST00000560562 RNF181Q9P0P0 153 aa18.35■□□□□ 0.53
TNFAIP2-207ENST00000560562 LAS1LQ9Y4W2 734 aaKnown RBP18.35■□□□□ 0.53
TNFAIP2-207ENST00000560562 LAMB2P55268 1798 aa18.35■□□□□ 0.53
TNFAIP2-207ENST00000560562 ERVV-1B6SEH8 477 aa18.34■□□□□ 0.53
TNFAIP2-207ENST00000560562 NPHP1O15259 732 aa18.34■□□□□ 0.53
TNFAIP2-207ENST00000560562 ZNF219Q9P2Y4 722 aaPredicted RBP18.34■□□□□ 0.53
TNFAIP2-207ENST00000560562 KLRG2A4D1S0 409 aaPredicted RBP18.32■□□□□ 0.52
TNFAIP2-207ENST00000560562 C21orf2O43822 256 aa18.32■□□□□ 0.52
TNFAIP2-207ENST00000560562 GPTP24298 496 aa18.32■□□□□ 0.52
TNFAIP2-207ENST00000560562 KIF6Q6ZMV9 814 aa18.32■□□□□ 0.52
TNFAIP2-207ENST00000560562 NMRK2Q9NPI5 230 aa18.32■□□□□ 0.52
TNFAIP2-207ENST00000560562 PDZRN3Q9UPQ7 1066 aa18.32■□□□□ 0.52
TNFAIP2-207ENST00000560562 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
TNFAIP2-207ENST00000560562 STYK1Q6J9G0 422 aa18.32■□□□□ 0.52
TNFAIP2-207ENST00000560562 PRPF40BQ6NWY9 871 aaKnown RBP18.32■□□□□ 0.52
TNFAIP2-207ENST00000560562 NUTM1Q86Y26 1132 aa18.32■□□□□ 0.52
TNFAIP2-207ENST00000560562 ZNF853P0CG23 659 aa18.31■□□□□ 0.52
TNFAIP2-207ENST00000560562 TPTE2Q6XPS3 522 aa18.31■□□□□ 0.52
TNFAIP2-207ENST00000560562 GIGYF2Q6Y7W6 1299 aaKnown RBP18.31■□□□□ 0.52
TNFAIP2-207ENST00000560562 ZNF34Q8IZ26 560 aa18.31■□□□□ 0.52
TNFAIP2-207ENST00000560562 MASTLQ96GX5 879 aa18.31■□□□□ 0.52
TNFAIP2-207ENST00000560562 MBIPQ9NS73 344 aa18.31■□□□□ 0.52
TNFAIP2-207ENST00000560562 ERFEQ4G0M1 354 aa18.3■□□□□ 0.52
TNFAIP2-207ENST00000560562 SUSD4Q5VX71 490 aa18.3■□□□□ 0.52
TNFAIP2-207ENST00000560562 CFAP44Q96MT7 982 aa18.3■□□□□ 0.52
TNFAIP2-207ENST00000560562 TAF1P21675 1872 aa18.29■□□□□ 0.52
TNFAIP2-207ENST00000560562 LMNB1P20700 586 aa18.29■□□□□ 0.52
TNFAIP2-207ENST00000560562 C7orf43Q8WVR3 580 aa18.29■□□□□ 0.52
TNFAIP2-207ENST00000560562 CHPF2Q9P2E5 772 aa18.29■□□□□ 0.52
TNFAIP2-207ENST00000560562 IBTKQ9P2D0 1353 aaPredicted RBP18.29■□□□□ 0.52
TNFAIP2-207ENST00000560562 NTSR2O95665 410 aa18.28■□□□□ 0.52
TNFAIP2-207ENST00000560562 OLFM4Q6UX06 510 aa18.28■□□□□ 0.52
TNFAIP2-207ENST00000560562 XAGE3Q8WTP9 111 aa18.28■□□□□ 0.52
TNFAIP2-207ENST00000560562 CNKSR1Q969H4 720 aa18.28■□□□□ 0.52
TNFAIP2-207ENST00000560562 RIC1Q4ADV7 1423 aa18.28■□□□□ 0.52
TNFAIP2-207ENST00000560562 DDX60Q8IY21 1712 aaKnown RBP18.27■□□□□ 0.52
TNFAIP2-207ENST00000560562 NPR1P16066 1061 aa18.27■□□□□ 0.52
TNFAIP2-207ENST00000560562 C3orf67Q6ZVT6 689 aa18.27■□□□□ 0.52
TNFAIP2-207ENST00000560562 COPS6Q7L5N1 327 aa18.27■□□□□ 0.52
TNFAIP2-207ENST00000560562 SLC51AQ86UW1 340 aa18.27■□□□□ 0.52
TNFAIP2-207ENST00000560562 DDX21Q9NR30 783 aaKnown RBP eCLIP18.27■□□□□ 0.52
TNFAIP2-207ENST00000560562 AIMP1Q12904 312 aaKnown RBP18.26■□□□□ 0.51
TNFAIP2-207ENST00000560562 CRY2Q49AN0 593 aa18.26■□□□□ 0.51
TNFAIP2-207ENST00000560562 DUSP27Q5VZP5 1158 aa18.26■□□□□ 0.51
TNFAIP2-207ENST00000560562 SNED1Q8TER0 1413 aa18.26■□□□□ 0.51
TNFAIP2-207ENST00000560562 HDGFL1Q5TGJ6 251 aa18.25■□□□□ 0.51
TNFAIP2-207ENST00000560562 NYXQ9GZU5 481 aa18.25■□□□□ 0.51
TNFAIP2-207ENST00000560562 IFT57Q9NWB7 429 aa18.25■□□□□ 0.51
TNFAIP2-207ENST00000560562 LTBP3Q9NS15 1303 aa18.24■□□□□ 0.51
TNFAIP2-207ENST00000560562 HOXB7P09629 217 aa18.24■□□□□ 0.51
TNFAIP2-207ENST00000560562 GTF2E1P29083 439 aaPredicted RBP18.24■□□□□ 0.51
TNFAIP2-207ENST00000560562 ZC3H4Q9UPT8 1303 aaKnown RBP18.24■□□□□ 0.51
TNFAIP2-207ENST00000560562 WDR90Q96KV7 1748 aa18.23■□□□□ 0.51
TNFAIP2-207ENST00000560562 SYNE4Q8N205 404 aa18.23■□□□□ 0.51
TNFAIP2-207ENST00000560562 ZNF428Q96B54 188 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms