RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 NLGN2Q8NFZ4 835 aa21.76■■□□□ 1.07
RPL28-209ENST00000560055 DBF4Q9UBU7 674 aaPredicted RBP21.76■■□□□ 1.07
RPL28-209ENST00000560055 POLRMTO00411 1230 aaKnown RBP21.75■■□□□ 1.07
RPL28-209ENST00000560055 TWISTNBQ3B726 338 aaPredicted RBP21.75■■□□□ 1.07
RPL28-209ENST00000560055 MAP3K15Q6ZN16 1313 aa21.75■■□□□ 1.07
RPL28-209ENST00000560055 ERVV-1B6SEH8 477 aa21.74■■□□□ 1.07
RPL28-209ENST00000560055 E9PSI1 815 aa21.74■■□□□ 1.07
RPL28-209ENST00000560055 EXOSC9Q06265 439 aaKnown RBP21.74■■□□□ 1.07
RPL28-209ENST00000560055 TBC1D9BQ66K14 1250 aa21.74■■□□□ 1.07
RPL28-209ENST00000560055 SLFN5Q08AF3 891 aa21.73■■□□□ 1.07
RPL28-209ENST00000560055 KIF6Q6ZMV9 814 aa21.73■■□□□ 1.07
RPL28-209ENST00000560055 CHMP4AQ9BY43 222 aa21.73■■□□□ 1.07
RPL28-209ENST00000560055 ZNF652Q9Y2D9 606 aa21.73■■□□□ 1.07
RPL28-209ENST00000560055 PARP3Q9Y6F1 533 aa21.73■■□□□ 1.07
RPL28-209ENST00000560055 VAMP4O75379 141 aa21.72■■□□□ 1.07
RPL28-209ENST00000560055 HLFQ16534 295 aa21.72■■□□□ 1.07
RPL28-209ENST00000560055 CCDC30Q5VVM6 783 aa21.72■■□□□ 1.07
RPL28-209ENST00000560055 TRMT2AQ8IZ69 625 aaKnown RBP21.72■■□□□ 1.07
RPL28-209ENST00000560055 XAGE3Q8WTP9 111 aa21.72■■□□□ 1.07
RPL28-209ENST00000560055 CDCA7LQ96GN5 454 aa21.72■■□□□ 1.07
RPL28-209ENST00000560055 HYPKQ9NX55 129 aa21.72■■□□□ 1.07
RPL28-209ENST00000560055 CD2APQ9Y5K6 639 aa21.72■■□□□ 1.07
RPL28-209ENST00000560055 COPS6Q7L5N1 327 aa21.71■■□□□ 1.07
RPL28-209ENST00000560055 NRXN2Q9P2S2 1712 aa21.71■■□□□ 1.07
RPL28-209ENST00000560055 C10orf71Q711Q0 1435 aa21.71■■□□□ 1.07
RPL28-209ENST00000560055 GPR162Q16538 588 aa21.7■■□□□ 1.06
RPL28-209ENST00000560055 CHD4Q14839 1912 aa21.7■■□□□ 1.06
RPL28-209ENST00000560055 HNRNPUQ00839 825 aaKnown RBP eCLIP21.69■■□□□ 1.06
RPL28-209ENST00000560055 BICDL1Q6ZP65 573 aa21.69■■□□□ 1.06
RPL28-209ENST00000560055 PELP1Q8IZL8 1130 aaKnown RBP21.69■■□□□ 1.06
RPL28-209ENST00000560055 ZBTB3Q9H5J0 574 aa21.69■■□□□ 1.06
RPL28-209ENST00000560055 CARMIL3Q8ND23 1372 aa21.69■■□□□ 1.06
RPL28-209ENST00000560055 ATP10DQ9P241 1426 aa21.69■■□□□ 1.06
RPL28-209ENST00000560055 KIF13BQ9NQT8 1826 aa21.69■■□□□ 1.06
RPL28-209ENST00000560055 SERPINB2P05120 415 aa21.68■■□□□ 1.06
RPL28-209ENST00000560055 GIGYF2Q6Y7W6 1299 aaKnown RBP21.68■■□□□ 1.06
RPL28-209ENST00000560055 SETDB2Q96T68 719 aa21.68■■□□□ 1.06
RPL28-209ENST00000560055 AIMP1Q12904 312 aaKnown RBP21.67■■□□□ 1.06
RPL28-209ENST00000560055 NUP98P52948 1817 aa21.66■■□□□ 1.06
RPL28-209ENST00000560055 AFDNP55196 1824 aaKnown RBP21.66■■□□□ 1.06
RPL28-209ENST00000560055 PHAXQ9H814 394 aaKnown RBP21.66■■□□□ 1.06
RPL28-209ENST00000560055 NIP7Q9Y221 180 aaKnown RBP eCLIP21.66■■□□□ 1.06
RPL28-209ENST00000560055 PLBD2Q8NHP8 589 aa21.65■■□□□ 1.06
RPL28-209ENST00000560055 STK31Q9BXU1 1019 aa21.65■■□□□ 1.06
RPL28-209ENST00000560055 TCERG1O14776 1098 aaKnown RBP21.64■■□□□ 1.05
RPL28-209ENST00000560055 ANKRD13DQ6ZTN6 518 aa21.64■■□□□ 1.05
RPL28-209ENST00000560055 ZNF34Q8IZ26 560 aa21.64■■□□□ 1.05
RPL28-209ENST00000560055 ZBED9Q6R2W3 1325 aa21.63■■□□□ 1.05
RPL28-209ENST00000560055 UBN2Q6ZU65 1347 aa21.63■■□□□ 1.05
RPL28-209ENST00000560055 YBX3P16989 372 aaKnown RBP eCLIP21.63■■□□□ 1.052e-8■■■■□ 19.5
RPL28-209ENST00000560055 PRR5LQ6MZQ0 368 aa21.63■■□□□ 1.05
RPL28-209ENST00000560055 PXDNLA1KZ92 1463 aa21.63■■□□□ 1.05
RPL28-209ENST00000560055 KIAA1551Q9HCM1 1747 aa21.63■■□□□ 1.05
RPL28-209ENST00000560055 SLC4A2P04920 1241 aa21.62■■□□□ 1.05
RPL28-209ENST00000560055 IBTKQ9P2D0 1353 aaPredicted RBP21.61■■□□□ 1.05
RPL28-209ENST00000560055 TGFB2P61812 414 aa21.61■■□□□ 1.05
RPL28-209ENST00000560055 HSP90AB3PQ58FF7 597 aa21.61■■□□□ 1.05
RPL28-209ENST00000560055 G2E3Q7L622 706 aa21.61■■□□□ 1.05
RPL28-209ENST00000560055 ZNF784Q8NCA9 323 aaPredicted RBP21.61■■□□□ 1.05
RPL28-209ENST00000560055 CACNA1FO60840 1977 aa21.6■■□□□ 1.05
RPL28-209ENST00000560055 GPTP24298 496 aa21.6■■□□□ 1.05
RPL28-209ENST00000560055 TCIRG1Q13488 830 aa21.6■■□□□ 1.05
RPL28-209ENST00000560055 NBPF5PQ86XG9 351 aaPredicted RBP21.6■■□□□ 1.05
RPL28-209ENST00000560055 CNBD1Q8NA66 436 aa21.6■■□□□ 1.05
RPL28-209ENST00000560055 PARP10Q53GL7 1025 aa21.59■■□□□ 1.05
RPL28-209ENST00000560055 ANKRD36CQ5JPF3 1778 aa21.59■■□□□ 1.05
RPL28-209ENST00000560055 CT47B1P0C2W7 299 aaPredicted RBP21.58■■□□□ 1.05
RPL28-209ENST00000560055 FLIIQ13045 1269 aa21.58■■□□□ 1.05
RPL28-209ENST00000560055 TPTE2Q6XPS3 522 aa21.58■■□□□ 1.05
RPL28-209ENST00000560055 ZNF428Q96B54 188 aa21.58■■□□□ 1.05
RPL28-209ENST00000560055 ISCA1Q9BUE6 129 aa21.58■■□□□ 1.05
RPL28-209ENST00000560055 ARFGEF2Q9Y6D5 1785 aa21.58■■□□□ 1.04
RPL28-209ENST00000560055 DDX58O95786 925 aaKnown RBP21.57■■□□□ 1.04
RPL28-209ENST00000560055 SUSD4Q5VX71 490 aa21.57■■□□□ 1.04
RPL28-209ENST00000560055 RIC3Q7Z5B4 369 aa21.57■■□□□ 1.04
RPL28-209ENST00000560055 NLRP10Q86W26 655 aa21.57■■□□□ 1.04
RPL28-209ENST00000560055 BRIP1Q9BX63 1249 aa21.57■■□□□ 1.04
RPL28-209ENST00000560055 NYXQ9GZU5 481 aa21.57■■□□□ 1.04
RPL28-209ENST00000560055 WWC3Q9ULE0 1092 aa21.57■■□□□ 1.04
RPL28-209ENST00000560055 ADCY9O60503 1353 aa21.57■■□□□ 1.04
RPL28-209ENST00000560055 ANKRD31Q8N7Z5 1873 aa21.56■■□□□ 1.04
RPL28-209ENST00000560055 A0A0G2JLW4 131 aa21.56■■□□□ 1.04
RPL28-209ENST00000560055 NTSR2O95665 410 aa21.56■■□□□ 1.04
RPL28-209ENST00000560055 DPEP1P16444 411 aa21.56■■□□□ 1.04
RPL28-209ENST00000560055 KCNA3P22001 575 aa21.56■■□□□ 1.04
RPL28-209ENST00000560055 ST5P78524 1137 aa21.56■■□□□ 1.04
RPL28-209ENST00000560055 TRIM28Q13263 835 aaKnown RBP21.56■■□□□ 1.04
RPL28-209ENST00000560055 KSR2Q6VAB6 950 aa21.56■■□□□ 1.04
RPL28-209ENST00000560055 CCDC24Q8N4L8 307 aa21.56■■□□□ 1.04
RPL28-209ENST00000560055 PI4KAP2A4QPH2 592 aa21.55■■□□□ 1.04
RPL28-209ENST00000560055 PI4KAP1Q8N8J0 262 aa21.55■■□□□ 1.04
RPL28-209ENST00000560055 N4BP2Q86UW6 1770 aaPredicted RBP21.54■■□□□ 1.04
RPL28-209ENST00000560055 ABCC12Q96J65 1359 aa21.54■■□□□ 1.04
RPL28-209ENST00000560055 FAM177BA6PVY3 158 aa21.54■■□□□ 1.04
RPL28-209ENST00000560055 PPP1R42Q7Z4L9 355 aa21.54■■□□□ 1.04
RPL28-209ENST00000560055 METTL22Q9BUU2 404 aaPredicted RBP21.54■■□□□ 1.04
RPL28-209ENST00000560055 MAP3K2Q9Y2U5 619 aa21.54■■□□□ 1.04
RPL28-209ENST00000560055 KLRG2A4D1S0 409 aaPredicted RBP21.53■■□□□ 1.04
RPL28-209ENST00000560055 NPHP1O15259 732 aa21.53■■□□□ 1.04
RPL28-209ENST00000560055 CHRNA5P30532 468 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms