RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 INTS3Q68E01 1043 aaKnown RBP13.37□□□□□ -0.27
PPP1R3E-204ENST00000559942 GJA3Q9Y6H8 435 aa13.37□□□□□ -0.27
PPP1R3E-204ENST00000559942 ANKRD31Q8N7Z5 1873 aa13.36□□□□□ -0.27
PPP1R3E-204ENST00000559942 RAB3GAP2Q9H2M9 1393 aa13.36□□□□□ -0.27
PPP1R3E-204ENST00000559942 PAPPA2Q9BXP8 1791 aa13.36□□□□□ -0.27
PPP1R3E-204ENST00000559942 FBLN1P23142 703 aa13.36□□□□□ -0.27
PPP1R3E-204ENST00000559942 RGMBQ6NW40 437 aa13.36□□□□□ -0.27
PPP1R3E-204ENST00000559942 PRPF40BQ6NWY9 871 aaKnown RBP13.36□□□□□ -0.27
PPP1R3E-204ENST00000559942 ZNF296Q8WUU4 475 aaPredicted RBP13.36□□□□□ -0.27
PPP1R3E-204ENST00000559942 CCDC102AQ96A19 550 aa13.36□□□□□ -0.27
PPP1R3E-204ENST00000559942 GLIS2Q9BZE0 524 aaPredicted RBP13.36□□□□□ -0.27
PPP1R3E-204ENST00000559942 SPG7Q9UQ90 795 aa13.36□□□□□ -0.27
PPP1R3E-204ENST00000559942 FKBP4Q02790 459 aaKnown RBP eCLIP13.35□□□□□ -0.27
PPP1R3E-204ENST00000559942 CSRNP1Q96S65 589 aa13.35□□□□□ -0.27
PPP1R3E-204ENST00000559942 BRIP1Q9BX63 1249 aa13.35□□□□□ -0.27
PPP1R3E-204ENST00000559942 SCNN1DP51172 638 aa13.34□□□□□ -0.27
PPP1R3E-204ENST00000559942 CCDC93Q567U6 631 aa13.34□□□□□ -0.27
PPP1R3E-204ENST00000559942 EN2P19622 333 aaPredicted RBP13.33□□□□□ -0.28
PPP1R3E-204ENST00000559942 EIF6P56537 245 aaKnown RBP13.33□□□□□ -0.28
PPP1R3E-204ENST00000559942 NARFQ9UHQ1 456 aa13.33□□□□□ -0.28
PPP1R3E-204ENST00000559942 COL11A2P13942 1736 aaPredicted RBP13.33□□□□□ -0.28
PPP1R3E-204ENST00000559942 RBBP6Q7Z6E9 1792 aaKnown RBP13.32□□□□□ -0.28
PPP1R3E-204ENST00000559942 RANBP2P49792 3224 aaKnown RBP13.32□□□□□ -0.28
PPP1R3E-204ENST00000559942 UNC80Q8N2C7 3258 aa13.32□□□□□ -0.28
PPP1R3E-204ENST00000559942 IARSP41252 1262 aaKnown RBP13.32□□□□□ -0.28
PPP1R3E-204ENST00000559942 STYK1Q6J9G0 422 aa13.32□□□□□ -0.28
PPP1R3E-204ENST00000559942 JDP2Q8WYK2 163 aa13.32□□□□□ -0.28
PPP1R3E-204ENST00000559942 ZNF157P51786 506 aaPredicted RBP13.31□□□□□ -0.28
PPP1R3E-204ENST00000559942 INTS5Q6P9B9 1019 aaKnown RBP13.31□□□□□ -0.28
PPP1R3E-204ENST00000559942 IFNL2Q8IZJ0 200 aa13.31□□□□□ -0.28
PPP1R3E-204ENST00000559942 CCDC24Q8N4L8 307 aa13.31□□□□□ -0.28
PPP1R3E-204ENST00000559942 C7orf43Q8WVR3 580 aa13.31□□□□□ -0.28
PPP1R3E-204ENST00000559942 ARFGEF2Q9Y6D5 1785 aa13.3□□□□□ -0.28
PPP1R3E-204ENST00000559942 PLA2G5P39877 138 aa13.3□□□□□ -0.28
PPP1R3E-204ENST00000559942 HDGFL2Q7Z4V5 671 aaPredicted RBP13.3□□□□□ -0.28
PPP1R3E-204ENST00000559942 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
PPP1R3E-204ENST00000559942 BCL2L12Q9HB09 334 aa13.3□□□□□ -0.28
PPP1R3E-204ENST00000559942 RTL1A6NKG5 1358 aa13.3□□□□□ -0.28
PPP1R3E-204ENST00000559942 PTCD1O75127 700 aaKnown RBP13.29□□□□□ -0.28
PPP1R3E-204ENST00000559942 PHKG2P15735 406 aa13.29□□□□□ -0.28
PPP1R3E-204ENST00000559942 CDC37L1Q7L3B6 337 aa13.29□□□□□ -0.28
PPP1R3E-204ENST00000559942 RTKN2Q8IZC4 609 aa13.29□□□□□ -0.28
PPP1R3E-204ENST00000559942 TMC1Q8TDI8 760 aa13.29□□□□□ -0.28
PPP1R3E-204ENST00000559942 FAM122AQ96E09 287 aa13.29□□□□□ -0.28
PPP1R3E-204ENST00000559942 MASTLQ96GX5 879 aa13.29□□□□□ -0.28
PPP1R3E-204ENST00000559942 COG3Q96JB2 828 aa13.29□□□□□ -0.28
PPP1R3E-204ENST00000559942 ADARB2Q9NS39 739 aaKnown RBP13.29□□□□□ -0.28
PPP1R3E-204ENST00000559942 TBC1D8O95759 1140 aa13.28□□□□□ -0.28
PPP1R3E-204ENST00000559942 SRGNP10124 158 aa13.28□□□□□ -0.28
PPP1R3E-204ENST00000559942 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.28□□□□□ -0.28
PPP1R3E-204ENST00000559942 PGAP2Q9UHJ9 254 aa13.28□□□□□ -0.28
PPP1R3E-204ENST00000559942 EDC4Q6P2E9 1401 aaKnown RBP13.28□□□□□ -0.28
PPP1R3E-204ENST00000559942 BRCA2P51587 3418 aa13.27□□□□□ -0.28
PPP1R3E-204ENST00000559942 ERVV-2B6SEH9 535 aa13.27□□□□□ -0.29
PPP1R3E-204ENST00000559942 GPR25O00155 361 aa13.27□□□□□ -0.29
PPP1R3E-204ENST00000559942 RRS1Q15050 365 aaKnown RBP13.27□□□□□ -0.29
PPP1R3E-204ENST00000559942 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.29
PPP1R3E-204ENST00000559942 STXBP5LQ9Y2K9 1186 aa13.27□□□□□ -0.29
PPP1R3E-204ENST00000559942 BCORQ6W2J9 1755 aa13.27□□□□□ -0.29
PPP1R3E-204ENST00000559942 SOS1Q07889 1333 aaPredicted RBP13.26□□□□□ -0.29
PPP1R3E-204ENST00000559942 PRR5LQ6MZQ0 368 aa13.26□□□□□ -0.29
PPP1R3E-204ENST00000559942 C2orf69Q8N8R5 385 aa13.26□□□□□ -0.29
PPP1R3E-204ENST00000559942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.29
PPP1R3E-204ENST00000559942 SOX1O00570 391 aaPredicted RBP13.25□□□□□ -0.29
PPP1R3E-204ENST00000559942 SLC10A3P09131 477 aa13.25□□□□□ -0.29
PPP1R3E-204ENST00000559942 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
PPP1R3E-204ENST00000559942 HSP90AB2PQ58FF8 381 aa13.25□□□□□ -0.29
PPP1R3E-204ENST00000559942 NOM1Q5C9Z4 860 aaKnown RBP13.25□□□□□ -0.29
PPP1R3E-204ENST00000559942 ZC3H15Q8WU90 426 aaKnown RBP13.25□□□□□ -0.29
PPP1R3E-204ENST00000559942 LRCH3Q96II8 777 aa13.25□□□□□ -0.29
PPP1R3E-204ENST00000559942 GBA2Q9HCG7 927 aaPredicted RBP13.25□□□□□ -0.29
PPP1R3E-204ENST00000559942 RAPGEFL1Q9UHV5 662 aa13.25□□□□□ -0.29
PPP1R3E-204ENST00000559942 ERBB4Q15303 1308 aa13.24□□□□□ -0.29
PPP1R3E-204ENST00000559942 OLFM4Q6UX06 510 aa13.24□□□□□ -0.29
PPP1R3E-204ENST00000559942 SLC12A5Q9H2X9 1139 aa13.24□□□□□ -0.29
PPP1R3E-204ENST00000559942 GPRC5DQ9NZD1 345 aa13.24□□□□□ -0.29
PPP1R3E-204ENST00000559942 VCANP13611 3396 aa13.23□□□□□ -0.29
PPP1R3E-204ENST00000559942 FKTNO75072 461 aa13.23□□□□□ -0.29
PPP1R3E-204ENST00000559942 USP48Q86UV5 1035 aa13.23□□□□□ -0.29
PPP1R3E-204ENST00000559942 TMEM106CQ9BVX2 250 aa13.23□□□□□ -0.29
PPP1R3E-204ENST00000559942 PRO3102Q9H379 93 aa13.23□□□□□ -0.29
PPP1R3E-204ENST00000559942 TTC28Q96AY4 2481 aa13.22□□□□□ -0.29
PPP1R3E-204ENST00000559942 COL15A1P39059 1388 aa13.22□□□□□ -0.29
PPP1R3E-204ENST00000559942 POLR2AP24928 1970 aaKnown RBP13.22□□□□□ -0.29
PPP1R3E-204ENST00000559942 NPHP1O15259 732 aa13.22□□□□□ -0.29
PPP1R3E-204ENST00000559942 TJP1Q07157 1748 aa13.22□□□□□ -0.29
PPP1R3E-204ENST00000559942 DEFB123Q8N688 67 aa13.21□□□□□ -0.29
PPP1R3E-204ENST00000559942 TERF2IPQ9NYB0 399 aa13.21□□□□□ -0.29
PPP1R3E-204ENST00000559942 CENPFP49454 3210 aa13.21□□□□□ -0.29
PPP1R3E-204ENST00000559942 A0A1W2PP64 1363 aa13.2□□□□□ -0.3
PPP1R3E-204ENST00000559942 A0A1W2PPC1 479 aa13.2□□□□□ -0.3
PPP1R3E-204ENST00000559942 CABP4P57796 275 aa13.2□□□□□ -0.3
PPP1R3E-204ENST00000559942 TBC1D9BQ66K14 1250 aa13.2□□□□□ -0.3
PPP1R3E-204ENST00000559942 DLK2Q6UY11 383 aa13.2□□□□□ -0.3
PPP1R3E-204ENST00000559942 PIAS4Q8N2W9 510 aaPredicted RBP13.2□□□□□ -0.3
PPP1R3E-204ENST00000559942 TRIM17Q9Y577 477 aa13.2□□□□□ -0.3
PPP1R3E-204ENST00000559942 HIRAP54198 1017 aaPredicted RBP13.19□□□□□ -0.3
PPP1R3E-204ENST00000559942 ST5P78524 1137 aa13.19□□□□□ -0.3
PPP1R3E-204ENST00000559942 DNAJC10Q8IXB1 793 aa13.19□□□□□ -0.3
PPP1R3E-204ENST00000559942 CNBD1Q8NA66 436 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms