RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TWISTNBQ3B726 338 aaPredicted RBP14.83□□□□□ -0.04
SNX1-204ENST00000559061 TBC1D9BQ66K14 1250 aa14.83□□□□□ -0.04
SNX1-204ENST00000559061 C10orf71Q711Q0 1435 aa14.83□□□□□ -0.04
SNX1-204ENST00000559061 A0A087WZG4 1122 aa14.82□□□□□ -0.04
SNX1-204ENST00000559061 TCERG1O14776 1098 aaKnown RBP14.82□□□□□ -0.04
SNX1-204ENST00000559061 HNRNPUQ00839 825 aaKnown RBP eCLIP14.82□□□□□ -0.04
SNX1-204ENST00000559061 ARXQ96QS3 562 aa14.82□□□□□ -0.04
SNX1-204ENST00000559061 CARMIL3Q8ND23 1372 aa14.82□□□□□ -0.04
SNX1-204ENST00000559061 BRCA1P38398 1863 aaKnown RBP14.82□□□□□ -0.04
SNX1-204ENST00000559061 CACNA1FO60840 1977 aa14.82□□□□□ -0.04
SNX1-204ENST00000559061 COL11A2P13942 1736 aaPredicted RBP14.81□□□□□ -0.04
SNX1-204ENST00000559061 E9PSI1 815 aa14.81□□□□□ -0.04
SNX1-204ENST00000559061 ZPR1O75312 459 aa14.81□□□□□ -0.04
SNX1-204ENST00000559061 NLGN1Q8N2Q7 840 aa14.81□□□□□ -0.04
SNX1-204ENST00000559061 XAGE3Q8WTP9 111 aa14.81□□□□□ -0.04
SNX1-204ENST00000559061 PHAXQ9H814 394 aaKnown RBP14.81□□□□□ -0.04
SNX1-204ENST00000559061 MAP3K15Q6ZN16 1313 aa14.81□□□□□ -0.04
SNX1-204ENST00000559061 ATP10DQ9P241 1426 aa14.81□□□□□ -0.04
SNX1-204ENST00000559061 TNRC6CQ9HCJ0 1690 aaKnown RBP14.81□□□□□ -0.04
SNX1-204ENST00000559061 N4BP2Q86UW6 1770 aaPredicted RBP14.8□□□□□ -0.04
SNX1-204ENST00000559061 COPS6Q7L5N1 327 aa14.8□□□□□ -0.04
SNX1-204ENST00000559061 G2E3Q7L622 706 aa14.8□□□□□ -0.04
SNX1-204ENST00000559061 FHDC1Q9C0D6 1143 aaPredicted RBP14.8□□□□□ -0.04
SNX1-204ENST00000559061 MYH16Q9H6N6 1097 aa14.8□□□□□ -0.04
SNX1-204ENST00000559061 ZBED9Q6R2W3 1325 aa14.79□□□□□ -0.04
SNX1-204ENST00000559061 UBN2Q6ZU65 1347 aa14.79□□□□□ -0.04
SNX1-204ENST00000559061 NLGN2Q8NFZ4 835 aa14.79□□□□□ -0.04
SNX1-204ENST00000559061 ZBTB3Q9H5J0 574 aa14.79□□□□□ -0.04
SNX1-204ENST00000559061 DBF4Q9UBU7 674 aaPredicted RBP14.79□□□□□ -0.04
SNX1-204ENST00000559061 DLEC1Q9Y238 1755 aa14.79□□□□□ -0.04
SNX1-204ENST00000559061 PXDNLA1KZ92 1463 aa14.78□□□□□ -0.04
SNX1-204ENST00000559061 ERVV-1B6SEH8 477 aa14.78□□□□□ -0.04
SNX1-204ENST00000559061 RGL2O15211 777 aa14.78□□□□□ -0.04
SNX1-204ENST00000559061 POLD1P28340 1107 aa14.78□□□□□ -0.04
SNX1-204ENST00000559061 ADCY9O60503 1353 aa14.77□□□□□ -0.04
SNX1-204ENST00000559061 CLEC4GQ6UXB4 293 aa14.77□□□□□ -0.05
SNX1-204ENST00000559061 BICDL1Q6ZP65 573 aa14.77□□□□□ -0.05
SNX1-204ENST00000559061 SYT17Q9BSW7 474 aa14.77□□□□□ -0.05
SNX1-204ENST00000559061 AIMP1Q12904 312 aaKnown RBP14.76□□□□□ -0.05
SNX1-204ENST00000559061 CCDC30Q5VVM6 783 aa14.76□□□□□ -0.05
SNX1-204ENST00000559061 GIGYF2Q6Y7W6 1299 aaKnown RBP14.76□□□□□ -0.05
SNX1-204ENST00000559061 ZNF34Q8IZ26 560 aa14.76□□□□□ -0.05
SNX1-204ENST00000559061 HYPKQ9NX55 129 aa14.76□□□□□ -0.05
SNX1-204ENST00000559061 LAMB2P55268 1798 aa14.75□□□□□ -0.05
SNX1-204ENST00000559061 DDX60Q8IY21 1712 aaKnown RBP14.75□□□□□ -0.05
SNX1-204ENST00000559061 ABCC12Q96J65 1359 aa14.75□□□□□ -0.05
SNX1-204ENST00000559061 GOLGB1Q14789 3259 aaKnown RBP14.75□□□□□ -0.05
SNX1-204ENST00000559061 KIF6Q6ZMV9 814 aa14.75□□□□□ -0.05
SNX1-204ENST00000559061 SERPINB2P05120 415 aa14.74□□□□□ -0.05
SNX1-204ENST00000559061 PRR5LQ6MZQ0 368 aa14.74□□□□□ -0.05
SNX1-204ENST00000559061 CCDC24Q8N4L8 307 aa14.74□□□□□ -0.05
SNX1-204ENST00000559061 PLBD2Q8NHP8 589 aa14.74□□□□□ -0.05
SNX1-204ENST00000559061 PPP1R1BQ9UD71 204 aaPredicted RBP14.74□□□□□ -0.05
SNX1-204ENST00000559061 PARP3Q9Y6F1 533 aa14.74□□□□□ -0.05
SNX1-204ENST00000559061 SLC4A2P04920 1241 aa14.73□□□□□ -0.05
SNX1-204ENST00000559061 GPTP24298 496 aa14.73□□□□□ -0.05
SNX1-204ENST00000559061 NIP7Q9Y221 180 aaKnown RBP eCLIP14.73□□□□□ -0.05
SNX1-204ENST00000559061 CD2APQ9Y5K6 639 aa14.73□□□□□ -0.05
SNX1-204ENST00000559061 COL4A1P02462 1669 aa14.72□□□□□ -0.05
SNX1-204ENST00000559061 NTSR2O95665 410 aa14.72□□□□□ -0.05
SNX1-204ENST00000559061 KCNA3P22001 575 aa14.72□□□□□ -0.05
SNX1-204ENST00000559061 SUSD4Q5VX71 490 aa14.72□□□□□ -0.05
SNX1-204ENST00000559061 MRPL50Q8N5N7 158 aaKnown RBP14.72□□□□□ -0.05
SNX1-204ENST00000559061 SSH1Q8WYL5 1049 aa14.72□□□□□ -0.05
SNX1-204ENST00000559061 ISCA1Q9BUE6 129 aa14.72□□□□□ -0.05
SNX1-204ENST00000559061 IBTKQ9P2D0 1353 aaPredicted RBP14.72□□□□□ -0.05
SNX1-204ENST00000559061 FLIIQ13045 1269 aa14.71□□□□□ -0.05
SNX1-204ENST00000559061 TCIRG1Q13488 830 aa14.71□□□□□ -0.05
SNX1-204ENST00000559061 ANKRD13DQ6ZTN6 518 aa14.71□□□□□ -0.05
SNX1-204ENST00000559061 ZNF428Q96B54 188 aa14.71□□□□□ -0.05
SNX1-204ENST00000559061 SETDB2Q96T68 719 aa14.71□□□□□ -0.05
SNX1-204ENST00000559061 ZNF652Q9Y2D9 606 aa14.71□□□□□ -0.05
SNX1-204ENST00000559061 UTRNP46939 3433 aa14.7□□□□□ -0.06
SNX1-204ENST00000559061 NPM2Q86SE8 214 aaKnown RBP14.7□□□□□ -0.06
SNX1-204ENST00000559061 NLRP10Q86W26 655 aa14.7□□□□□ -0.06
SNX1-204ENST00000559061 SYNE4Q8N205 404 aa14.7□□□□□ -0.06
SNX1-204ENST00000559061 KLHL34Q8N239 644 aa14.7□□□□□ -0.06
SNX1-204ENST00000559061 BCL2L13Q9BXK5 485 aa14.7□□□□□ -0.06
SNX1-204ENST00000559061 STK31Q9BXU1 1019 aa14.7□□□□□ -0.06
SNX1-204ENST00000559061 CACNA1SQ13698 1873 aa14.69□□□□□ -0.06
SNX1-204ENST00000559061 RIC1Q4ADV7 1423 aa14.69□□□□□ -0.06
SNX1-204ENST00000559061 PI4KAP2A4QPH2 592 aa14.69□□□□□ -0.06
SNX1-204ENST00000559061 ATP5J2-PTCD1G3V325 749 aa14.69□□□□□ -0.06
SNX1-204ENST00000559061 IGKV5-2P06315 115 aa14.69□□□□□ -0.06
SNX1-204ENST00000559061 C3orf67Q6ZVT6 689 aa14.69□□□□□ -0.06
SNX1-204ENST00000559061 NUTM1Q86Y26 1132 aa14.69□□□□□ -0.06
SNX1-204ENST00000559061 PI4KAP1Q8N8J0 262 aa14.69□□□□□ -0.06
SNX1-204ENST00000559061 MAP3K2Q9Y2U5 619 aa14.69□□□□□ -0.06
SNX1-204ENST00000559061 ARFGEF1Q9Y6D6 1849 aa14.69□□□□□ -0.06
SNX1-204ENST00000559061 FAM177BA6PVY3 158 aa14.68□□□□□ -0.06
SNX1-204ENST00000559061 DPEP1P16444 411 aa14.68□□□□□ -0.06
SNX1-204ENST00000559061 CHRNA5P30532 468 aa14.68□□□□□ -0.06
SNX1-204ENST00000559061 ERFEQ4G0M1 354 aa14.68□□□□□ -0.06
SNX1-204ENST00000559061 KSR2Q6VAB6 950 aa14.68□□□□□ -0.06
SNX1-204ENST00000559061 CNBD1Q8NA66 436 aa14.68□□□□□ -0.06
SNX1-204ENST00000559061 METTL22Q9BUU2 404 aaPredicted RBP14.68□□□□□ -0.06
SNX1-204ENST00000559061 A0A0G2JLW4 131 aa14.67□□□□□ -0.06
SNX1-204ENST00000559061 F6X3S4 739 aa14.67□□□□□ -0.06
SNX1-204ENST00000559061 YBX3P16989 372 aaKnown RBP eCLIP14.67□□□□□ -0.06
SNX1-204ENST00000559061 RARSP54136 660 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms