RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 AIMP1Q12904 312 aaKnown RBP17.96■□□□□ 0.46
TSPAN3-205ENST00000558745 HDGFL1Q5TGJ6 251 aa17.96■□□□□ 0.46
TSPAN3-205ENST00000558745 ZBTB3Q9H5J0 574 aa17.96■□□□□ 0.46
TSPAN3-205ENST00000558745 NCBP3Q53F19 620 aaKnown RBP17.95■□□□□ 0.46
TSPAN3-205ENST00000558745 CHPF2Q9P2E5 772 aa17.95■□□□□ 0.46
TSPAN3-205ENST00000558745 FAM177BA6PVY3 158 aa17.94■□□□□ 0.46
TSPAN3-205ENST00000558745 TCERG1O14776 1098 aaKnown RBP17.94■□□□□ 0.46
TSPAN3-205ENST00000558745 GPR162Q16538 588 aa17.94■□□□□ 0.46
TSPAN3-205ENST00000558745 COPS6Q7L5N1 327 aa17.94■□□□□ 0.46
TSPAN3-205ENST00000558745 WDR63Q8IWG1 891 aa17.94■□□□□ 0.46
TSPAN3-205ENST00000558745 DPEP1P16444 411 aa17.93■□□□□ 0.46
TSPAN3-205ENST00000558745 XAGE3Q8WTP9 111 aa17.93■□□□□ 0.46
TSPAN3-205ENST00000558745 SETDB2Q96T68 719 aa17.93■□□□□ 0.46
TSPAN3-205ENST00000558745 ERBB4Q15303 1308 aa17.93■□□□□ 0.46
TSPAN3-205ENST00000558745 YBX3P16989 372 aaKnown RBP eCLIP17.92■□□□□ 0.465e-9■■■□□ 17.7
TSPAN3-205ENST00000558745 CHRNA5P30532 468 aa17.92■□□□□ 0.46
TSPAN3-205ENST00000558745 KIF6Q6ZMV9 814 aa17.92■□□□□ 0.46
TSPAN3-205ENST00000558745 DDX21Q9NR30 783 aaKnown RBP eCLIP17.92■□□□□ 0.46
TSPAN3-205ENST00000558745 IL16Q14005 1332 aa17.92■□□□□ 0.46
TSPAN3-205ENST00000558745 MAP3K15Q6ZN16 1313 aa17.92■□□□□ 0.46
TSPAN3-205ENST00000558745 C10orf71Q711Q0 1435 aa17.92■□□□□ 0.46
TSPAN3-205ENST00000558745 CARMIL3Q8ND23 1372 aa17.91■□□□□ 0.46
TSPAN3-205ENST00000558745 FANCIQ9NVI1 1328 aa17.91■□□□□ 0.46
TSPAN3-205ENST00000558745 HOXB7P09629 217 aa17.91■□□□□ 0.46
TSPAN3-205ENST00000558745 CLEC4GQ6UXB4 293 aa17.91■□□□□ 0.46
TSPAN3-205ENST00000558745 NIP7Q9Y221 180 aaKnown RBP eCLIP17.91■□□□□ 0.46
TSPAN3-205ENST00000558745 AFDNP55196 1824 aaKnown RBP17.9■□□□□ 0.46
TSPAN3-205ENST00000558745 SCN7AQ01118 1682 aa17.9■□□□□ 0.46
TSPAN3-205ENST00000558745 KCNA3P22001 575 aa17.9■□□□□ 0.46
TSPAN3-205ENST00000558745 GPTP24298 496 aa17.9■□□□□ 0.46
TSPAN3-205ENST00000558745 TGFB2P61812 414 aa17.9■□□□□ 0.46
TSPAN3-205ENST00000558745 PRR5LQ6MZQ0 368 aa17.9■□□□□ 0.46
TSPAN3-205ENST00000558745 ZNF428Q96B54 188 aa17.9■□□□□ 0.46
TSPAN3-205ENST00000558745 PHAXQ9H814 394 aaKnown RBP17.9■□□□□ 0.46
TSPAN3-205ENST00000558745 ZNF652Q9Y2D9 606 aa17.9■□□□□ 0.46
TSPAN3-205ENST00000558745 PXDNLA1KZ92 1463 aa17.89■□□□□ 0.45
TSPAN3-205ENST00000558745 ZNF521Q96K83 1311 aa17.89■□□□□ 0.45
TSPAN3-205ENST00000558745 ERVV-1B6SEH8 477 aa17.89■□□□□ 0.45
TSPAN3-205ENST00000558745 EXOSC9Q06265 439 aaKnown RBP17.89■□□□□ 0.45
TSPAN3-205ENST00000558745 DBF4Q9UBU7 674 aaPredicted RBP17.89■□□□□ 0.45
TSPAN3-205ENST00000558745 BCORQ6W2J9 1755 aa17.89■□□□□ 0.45
TSPAN3-205ENST00000558745 N4BP2Q86UW6 1770 aaPredicted RBP17.89■□□□□ 0.45
TSPAN3-205ENST00000558745 TWISTNBQ3B726 338 aaPredicted RBP17.88■□□□□ 0.45
TSPAN3-205ENST00000558745 GIGYF2Q6Y7W6 1299 aaKnown RBP17.87■□□□□ 0.45
TSPAN3-205ENST00000558745 NBPF5PQ86XG9 351 aaPredicted RBP17.87■□□□□ 0.45
TSPAN3-205ENST00000558745 KIF13BQ9NQT8 1826 aa17.86■□□□□ 0.45
TSPAN3-205ENST00000558745 GOLGA2Q08379 1002 aa17.86■□□□□ 0.45
TSPAN3-205ENST00000558745 ZNF34Q8IZ26 560 aa17.86■□□□□ 0.45
TSPAN3-205ENST00000558745 CDCA7LQ96GN5 454 aa17.86■□□□□ 0.45
TSPAN3-205ENST00000558745 KIAA1551Q9HCM1 1747 aa17.86■□□□□ 0.45
TSPAN3-205ENST00000558745 UBN2Q6ZU65 1347 aa17.85■□□□□ 0.45
TSPAN3-205ENST00000558745 NRXN2Q9P2S2 1712 aa17.85■□□□□ 0.45
TSPAN3-205ENST00000558745 NPHP1O15259 732 aa17.85■□□□□ 0.45
TSPAN3-205ENST00000558745 VAMP4O75379 141 aa17.85■□□□□ 0.45
TSPAN3-205ENST00000558745 SUSD4Q5VX71 490 aa17.85■□□□□ 0.45
TSPAN3-205ENST00000558745 NUTM1Q86Y26 1132 aa17.85■□□□□ 0.45
TSPAN3-205ENST00000558745 CNBD1Q8NA66 436 aa17.85■□□□□ 0.45
TSPAN3-205ENST00000558745 HYPKQ9NX55 129 aa17.85■□□□□ 0.45
TSPAN3-205ENST00000558745 BCS1LQ9Y276 419 aa17.85■□□□□ 0.45
TSPAN3-205ENST00000558745 NUP98P52948 1817 aa17.85■□□□□ 0.45
TSPAN3-205ENST00000558745 CCDC30Q5VVM6 783 aa17.84■□□□□ 0.45
TSPAN3-205ENST00000558745 ANKRD13DQ6ZTN6 518 aa17.84■□□□□ 0.45
TSPAN3-205ENST00000558745 G2E3Q7L622 706 aa17.84■□□□□ 0.45
TSPAN3-205ENST00000558745 C2CD5Q86YS7 1000 aa17.84■□□□□ 0.45
TSPAN3-205ENST00000558745 RGL2O15211 777 aa17.83■□□□□ 0.44
TSPAN3-205ENST00000558745 TPTE2Q6XPS3 522 aa17.83■□□□□ 0.44
TSPAN3-205ENST00000558745 BRIP1Q9BX63 1249 aa17.83■□□□□ 0.44
TSPAN3-205ENST00000558745 MYH16Q9H6N6 1097 aa17.83■□□□□ 0.44
TSPAN3-205ENST00000558745 GOLGB1Q14789 3259 aaKnown RBP17.83■□□□□ 0.44
TSPAN3-205ENST00000558745 ERFEQ4G0M1 354 aa17.82■□□□□ 0.44
TSPAN3-205ENST00000558745 PLBD2Q8NHP8 589 aa17.82■□□□□ 0.44
TSPAN3-205ENST00000558745 PIM2Q9P1W9 311 aa17.82■□□□□ 0.44
TSPAN3-205ENST00000558745 ATP5J2-PTCD1G3V325 749 aa17.81■□□□□ 0.44
TSPAN3-205ENST00000558745 H0YIN7 160 aa17.81■□□□□ 0.44
TSPAN3-205ENST00000558745 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
TSPAN3-205ENST00000558745 HSPA6P17066 643 aa17.81■□□□□ 0.44
TSPAN3-205ENST00000558745 GTF2E1P29083 439 aaPredicted RBP17.81■□□□□ 0.44
TSPAN3-205ENST00000558745 ST5P78524 1137 aa17.81■□□□□ 0.44
TSPAN3-205ENST00000558745 TCIRG1Q13488 830 aa17.81■□□□□ 0.44
TSPAN3-205ENST00000558745 ZNF622Q969S3 477 aaKnown RBP eCLIP17.81■□□□□ 0.44
TSPAN3-205ENST00000558745 ATP10DQ9P241 1426 aa17.8■□□□□ 0.44
TSPAN3-205ENST00000558745 ANKRD31Q8N7Z5 1873 aa17.8■□□□□ 0.44
TSPAN3-205ENST00000558745 SLFN5Q08AF3 891 aa17.8■□□□□ 0.44
TSPAN3-205ENST00000558745 SYNE4Q8N205 404 aa17.8■□□□□ 0.44
TSPAN3-205ENST00000558745 GRIN3BO60391 1043 aa17.79■□□□□ 0.44
TSPAN3-205ENST00000558745 PDE6BP35913 854 aa17.79■□□□□ 0.44
TSPAN3-205ENST00000558745 DALRD3Q5D0E6 543 aaKnown RBP17.79■□□□□ 0.44
TSPAN3-205ENST00000558745 RIC3Q7Z5B4 369 aa17.79■□□□□ 0.44
TSPAN3-205ENST00000558745 NLRP10Q86W26 655 aa17.79■□□□□ 0.44
TSPAN3-205ENST00000558745 ABCC12Q96J65 1359 aa17.78■□□□□ 0.44
TSPAN3-205ENST00000558745 NTSR2O95665 410 aa17.78■□□□□ 0.44
TSPAN3-205ENST00000558745 STK31Q9BXU1 1019 aa17.78■□□□□ 0.44
TSPAN3-205ENST00000558745 ZNF219Q9P2Y4 722 aaPredicted RBP17.78■□□□□ 0.44
TSPAN3-205ENST00000558745 E9PSI1 815 aa17.77■□□□□ 0.44
TSPAN3-205ENST00000558745 HSP90AB3PQ58FF7 597 aa17.77■□□□□ 0.44
TSPAN3-205ENST00000558745 C3orf67Q6ZVT6 689 aa17.77■□□□□ 0.44
TSPAN3-205ENST00000558745 MYD88Q99836 296 aa17.77■□□□□ 0.44
TSPAN3-205ENST00000558745 ISCA1Q9BUE6 129 aa17.77■□□□□ 0.44
TSPAN3-205ENST00000558745 UTP14AQ9BVJ6 771 aaKnown RBP17.77■□□□□ 0.44
TSPAN3-205ENST00000558745 NYXQ9GZU5 481 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms