RNA–Protein interactions for RNA: ENST00000558005.1

CRTC3-203, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 570 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-203ENST00000558005 CNTNAP1P78357 1384 aa16.04■□□□□ 0.16
CRTC3-203ENST00000558005 CEMIPQ8WUJ3 1361 aa16.04■□□□□ 0.16
CRTC3-203ENST00000558005 POTECB2RU33 542 aa16.04■□□□□ 0.16
CRTC3-203ENST00000558005 NPR1P16066 1061 aa16.04■□□□□ 0.16
CRTC3-203ENST00000558005 DZIP3Q86Y13 1208 aaKnown RBP16.04■□□□□ 0.16
CRTC3-203ENST00000558005 CFAP53Q96M91 514 aa16.04■□□□□ 0.16
CRTC3-203ENST00000558005 TBC1D2BQ9UPU7 963 aa16.04■□□□□ 0.16
CRTC3-203ENST00000558005 SIPA1L3O60292 1781 aaPredicted RBP16.04■□□□□ 0.16
CRTC3-203ENST00000558005 BCORQ6W2J9 1755 aa16.04■□□□□ 0.16
CRTC3-203ENST00000558005 U2SURPO15042 1029 aaKnown RBP16.03■□□□□ 0.16
CRTC3-203ENST00000558005 CAMTA2O94983 1202 aa16.03■□□□□ 0.16
CRTC3-203ENST00000558005 PNMA8AQ86V59 439 aaPredicted RBP16.03■□□□□ 0.16
CRTC3-203ENST00000558005 NBPF5PQ86XG9 351 aaPredicted RBP16.03■□□□□ 0.16
CRTC3-203ENST00000558005 RTKN2Q8IZC4 609 aa16.03■□□□□ 0.16
CRTC3-203ENST00000558005 KIF7Q2M1P5 1343 aa16.02■□□□□ 0.16
CRTC3-203ENST00000558005 CTCFP49711 727 aaPredicted RBP16.02■□□□□ 0.16
CRTC3-203ENST00000558005 GRIPAP1Q4V328 841 aa16.02■□□□□ 0.16
CRTC3-203ENST00000558005 TPTE2Q6XPS3 522 aa16.02■□□□□ 0.16
CRTC3-203ENST00000558005 COL3A1P02461 1466 aaPredicted RBP16.02■□□□□ 0.15
CRTC3-203ENST00000558005 TMEM88BA6NKF7 163 aa16.01■□□□□ 0.15
CRTC3-203ENST00000558005 BTBD11A6QL63 1104 aa16.01■□□□□ 0.15
CRTC3-203ENST00000558005 FKBP4Q02790 459 aaKnown RBP eCLIP16.01■□□□□ 0.15
CRTC3-203ENST00000558005 IL17REQ8NFR9 667 aa16.01■□□□□ 0.15
CRTC3-203ENST00000558005 RTF1Q92541 710 aaKnown RBP16.01■□□□□ 0.15
CRTC3-203ENST00000558005 ZNF219Q9P2Y4 722 aaPredicted RBP16.01■□□□□ 0.15
CRTC3-203ENST00000558005 MKRN1Q9UHC7 482 aaKnown RBP16.01■□□□□ 0.15
CRTC3-203ENST00000558005 NUDCQ9Y266 331 aa16.01■□□□□ 0.15
CRTC3-203ENST00000558005 PASKQ96RG2 1323 aa16■□□□□ 0.15
CRTC3-203ENST00000558005 DDNO94850 711 aaPredicted RBP16■□□□□ 0.15
CRTC3-203ENST00000558005 SNRPA1P09661 255 aaKnown RBP16■□□□□ 0.15
CRTC3-203ENST00000558005 CC2D2BQ6DHV5 1058 aa16■□□□□ 0.15
CRTC3-203ENST00000558005 TAF1DQ9H5J8 278 aaPredicted RBP16■□□□□ 0.15
CRTC3-203ENST00000558005 HACL1Q9UJ83 578 aa16■□□□□ 0.15
CRTC3-203ENST00000558005 SLX4Q8IY92 1834 aa15.99■□□□□ 0.15
CRTC3-203ENST00000558005 ALDH1B1P30837 517 aa15.99■□□□□ 0.15
CRTC3-203ENST00000558005 CC2D1BQ5T0F9 858 aaKnown RBP15.99■□□□□ 0.15
CRTC3-203ENST00000558005 KLRG2A4D1S0 409 aaPredicted RBP15.98■□□□□ 0.15
CRTC3-203ENST00000558005 PER1O15534 1290 aaPredicted RBP15.98■□□□□ 0.15
CRTC3-203ENST00000558005 A1BGP04217 495 aa15.98■□□□□ 0.15
CRTC3-203ENST00000558005 GPC2Q8N158 579 aa15.97■□□□□ 0.15
CRTC3-203ENST00000558005 CCER1Q8TC90 406 aaPredicted RBP15.97■□□□□ 0.15
CRTC3-203ENST00000558005 C7orf43Q8WVR3 580 aa15.97■□□□□ 0.15
CRTC3-203ENST00000558005 JDP2Q8WYK2 163 aa15.97■□□□□ 0.15
CRTC3-203ENST00000558005 NYXQ9GZU5 481 aa15.97■□□□□ 0.15
CRTC3-203ENST00000558005 HTATSF1O43719 755 aaKnown RBP15.96■□□□□ 0.15
CRTC3-203ENST00000558005 GTF2E1P29083 439 aaPredicted RBP15.96■□□□□ 0.15
CRTC3-203ENST00000558005 EPHX2P34913 555 aa15.96■□□□□ 0.15
CRTC3-203ENST00000558005 MAP2K1Q02750 393 aaPredicted RBP15.96■□□□□ 0.15
CRTC3-203ENST00000558005 NIP7Q9Y221 180 aaKnown RBP eCLIP15.96■□□□□ 0.15
CRTC3-203ENST00000558005 CACNA1SQ13698 1873 aa15.96■□□□□ 0.15
CRTC3-203ENST00000558005 EAPPQ56P03 285 aaPredicted RBP15.95■□□□□ 0.14
CRTC3-203ENST00000558005 PSMD1Q99460 953 aa15.95■□□□□ 0.14
CRTC3-203ENST00000558005 CLEC11AQ9Y240 323 aa15.95■□□□□ 0.14
CRTC3-203ENST00000558005 RASSF10A6NK89 507 aa15.94■□□□□ 0.14
CRTC3-203ENST00000558005 FOXN1O15353 648 aa15.94■□□□□ 0.14
CRTC3-203ENST00000558005 NEFMP07197 916 aa15.94■□□□□ 0.14
CRTC3-203ENST00000558005 LMOD1P29536 600 aaPredicted RBP15.94■□□□□ 0.14
CRTC3-203ENST00000558005 PRKAR2BP31323 418 aa15.94■□□□□ 0.14
CRTC3-203ENST00000558005 IARSP41252 1262 aaKnown RBP15.94■□□□□ 0.14
CRTC3-203ENST00000558005 CCDC24Q8N4L8 307 aa15.94■□□□□ 0.14
CRTC3-203ENST00000558005 IBTKQ9P2D0 1353 aaPredicted RBP15.94■□□□□ 0.14
CRTC3-203ENST00000558005 RIC1Q4ADV7 1423 aa15.94■□□□□ 0.14
CRTC3-203ENST00000558005 TMX4Q9H1E5 349 aaPredicted RBP15.93■□□□□ 0.14
CRTC3-203ENST00000558005 WBP1LQ9NX94 342 aa15.93■□□□□ 0.14
CRTC3-203ENST00000558005 FZD9O00144 591 aa15.92■□□□□ 0.14
CRTC3-203ENST00000558005 ITGBL1O95965 494 aaPredicted RBP15.92■□□□□ 0.14
CRTC3-203ENST00000558005 POTEIP0CG38 1075 aa15.92■□□□□ 0.14
CRTC3-203ENST00000558005 POTEJP0CG39 1038 aa15.92■□□□□ 0.14
CRTC3-203ENST00000558005 ECE1P42892 770 aa15.92■□□□□ 0.14
CRTC3-203ENST00000558005 VEGFBP49765 207 aa15.92■□□□□ 0.14
CRTC3-203ENST00000558005 EIF6P56537 245 aaKnown RBP15.92■□□□□ 0.14
CRTC3-203ENST00000558005 PNISRQ8TF01 805 aaKnown RBP15.92■□□□□ 0.14
CRTC3-203ENST00000558005 BEGAINQ9BUH8 593 aa15.92■□□□□ 0.14
CRTC3-203ENST00000558005 RSPH6AQ9H0K4 717 aa15.92■□□□□ 0.14
CRTC3-203ENST00000558005 ZNF277Q9NRM2 450 aaPredicted RBP15.92■□□□□ 0.14
CRTC3-203ENST00000558005 ADAMTSL1Q8N6G6 1762 aa15.92■□□□□ 0.14
CRTC3-203ENST00000558005 ZNF541Q9H0D2 1346 aa15.92■□□□□ 0.14
CRTC3-203ENST00000558005 DEFB115Q30KQ5 88 aa15.91■□□□□ 0.14
CRTC3-203ENST00000558005 CRY2Q49AN0 593 aa15.91■□□□□ 0.14
CRTC3-203ENST00000558005 CNTROBQ8N137 903 aa15.91■□□□□ 0.14
CRTC3-203ENST00000558005 USP16Q9Y5T5 823 aa15.91■□□□□ 0.14
CRTC3-203ENST00000558005 LAMB4A4D0S4 1761 aa15.9■□□□□ 0.14
CRTC3-203ENST00000558005 ERVV-1B6SEH8 477 aa15.9■□□□□ 0.14
CRTC3-203ENST00000558005 RPGRQ92834 1020 aaKnown RBP15.9■□□□□ 0.14
CRTC3-203ENST00000558005 ABT1Q9ULW3 272 aaKnown RBP15.9■□□□□ 0.14
CRTC3-203ENST00000558005 U2AF1L5P0DN76 240 aaPredicted RBP15.89■□□□□ 0.13
CRTC3-203ENST00000558005 U2AF1Q01081 240 aaKnown RBP eCLIP15.89■□□□□ 0.13
CRTC3-203ENST00000558005 KIF6Q6ZMV9 814 aa15.89■□□□□ 0.13
CRTC3-203ENST00000558005 SYNE4Q8N205 404 aa15.89■□□□□ 0.13
CRTC3-203ENST00000558005 VPS33BQ9H267 617 aa15.89■□□□□ 0.13
CRTC3-203ENST00000558005 RNF123Q5XPI4 1314 aa15.89■□□□□ 0.13
CRTC3-203ENST00000558005 TAF7Q15545 349 aaPredicted RBP15.88■□□□□ 0.13
CRTC3-203ENST00000558005 PHACTR3Q96KR7 559 aa15.88■□□□□ 0.13
CRTC3-203ENST00000558005 KCNQ3O43525 872 aa15.87■□□□□ 0.13
CRTC3-203ENST00000558005 CA12O43570 354 aa15.87■□□□□ 0.13
CRTC3-203ENST00000558005 HOXA10P31260 410 aaPredicted RBP15.87■□□□□ 0.13
CRTC3-203ENST00000558005 USP50Q70EL3 339 aaPredicted RBP15.87■□□□□ 0.13
CRTC3-203ENST00000558005 ERBB4Q15303 1308 aa15.87■□□□□ 0.13
CRTC3-203ENST00000558005 WDR33Q9C0J8 1336 aaKnown RBP15.87■□□□□ 0.13
CRTC3-203ENST00000558005 THSD7BQ9C0I4 1608 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms