RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 BMP15O95972 392 aa10.12□□□□□ -0.79
SYNE3-205ENST00000557275 PANK3Q9H999 370 aa10.12□□□□□ -0.79
SYNE3-205ENST00000557275 SNW1Q13573 536 aaKnown RBP10.11□□□□□ -0.79
SYNE3-205ENST00000557275 CCDC129Q6ZRS4 1044 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 CTAGE9A4FU28 777 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 PRR16Q569H4 304 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 HAUS8Q9BT25 410 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 ATP2B1P20020 1258 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 CTAGE6Q86UF2 777 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.11□□□□□ -0.79
SYNE3-205ENST00000557275 ARHGAP25P42331 645 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 CFAP157Q5JU67 520 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 CEP57Q86XR8 500 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 TSGA10Q9BZW7 698 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 RASSF4Q9H2L5 321 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 PNISRQ8TF01 805 aaKnown RBP10.11□□□□□ -0.79
SYNE3-205ENST00000557275 EIF2AQ9BY44 585 aaKnown RBP10.11□□□□□ -0.79
SYNE3-205ENST00000557275 MAP3K7CLP57077 242 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 PPP4R3BQ5MIZ7 849 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 LTV1Q96GA3 475 aaPredicted RBP10.11□□□□□ -0.79
SYNE3-205ENST00000557275 EPSTI1Q96J88 318 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 UVSSAQ2YD98 709 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 THEGQ9P2T0 379 aa10.11□□□□□ -0.79
SYNE3-205ENST00000557275 SAMD1Q6SPF0 538 aaPredicted RBP10.11□□□□□ -0.79
SYNE3-205ENST00000557275 TSPYL2Q9H2G4 693 aaPredicted RBP10.1□□□□□ -0.79
SYNE3-205ENST00000557275 CEBPZQ03701 1054 aaKnown RBP10.1□□□□□ -0.79
SYNE3-205ENST00000557275 TMEM87AQ8NBN3 555 aa10.1□□□□□ -0.79
SYNE3-205ENST00000557275 SATB1Q01826 763 aa10.1□□□□□ -0.79
SYNE3-205ENST00000557275 TRAF1Q13077 416 aa10.1□□□□□ -0.79
SYNE3-205ENST00000557275 CUL5Q93034 780 aa10.1□□□□□ -0.79
SYNE3-205ENST00000557275 CACYBPQ9HB71 228 aaKnown RBP10.1□□□□□ -0.79
SYNE3-205ENST00000557275 C16orf45Q96MC5 204 aaPredicted RBP10.1□□□□□ -0.79
SYNE3-205ENST00000557275 CBX1P83916 185 aa10.1□□□□□ -0.79
SYNE3-205ENST00000557275 MCM6Q14566 821 aa10.1□□□□□ -0.79
SYNE3-205ENST00000557275 CSRNP2Q9H175 543 aa10.1□□□□□ -0.79
SYNE3-205ENST00000557275 A0A1B0GUL7 405 aa10.1□□□□□ -0.79
SYNE3-205ENST00000557275 GIGYF1O75420 1035 aaPredicted RBP10.1□□□□□ -0.79
SYNE3-205ENST00000557275 CYLC1P35663 651 aaPredicted RBP10.1□□□□□ -0.79
SYNE3-205ENST00000557275 BCL11BQ9C0K0 894 aaPredicted RBP10.1□□□□□ -0.79
SYNE3-205ENST00000557275 MTRF1LQ9UGC7 380 aaKnown RBP10.1□□□□□ -0.79
SYNE3-205ENST00000557275 RRP7AQ9Y3A4 280 aaKnown RBP10.09□□□□□ -0.79
SYNE3-205ENST00000557275 CUX2O14529 1486 aa10.09□□□□□ -0.79
SYNE3-205ENST00000557275 SSBP05455 408 aaKnown RBP eCLIP10.09□□□□□ -0.79
SYNE3-205ENST00000557275 CCDC114Q96M63 670 aa10.09□□□□□ -0.79
SYNE3-205ENST00000557275 FYB2Q5VWT5 728 aa10.09□□□□□ -0.79
SYNE3-205ENST00000557275 DHX37Q8IY37 1157 aaKnown RBP10.09□□□□□ -0.79
SYNE3-205ENST00000557275 BRPF3Q9ULD4 1205 aa10.09□□□□□ -0.79
SYNE3-205ENST00000557275 SPAG1Q07617 926 aa10.09□□□□□ -0.79
SYNE3-205ENST00000557275 PPFIA1Q13136 1202 aa10.09□□□□□ -0.79
SYNE3-205ENST00000557275 NAA25Q14CX7 972 aa10.09□□□□□ -0.79
SYNE3-205ENST00000557275 WDR78Q5VTH9 848 aa10.09□□□□□ -0.79
SYNE3-205ENST00000557275 TUBB2AQ13885 445 aa10.09□□□□□ -0.79
SYNE3-205ENST00000557275 TUBB2BQ9BVA1 445 aa10.09□□□□□ -0.79
SYNE3-205ENST00000557275 GPR161Q8N6U8 529 aaKnown RBP10.09□□□□□ -0.79
SYNE3-205ENST00000557275 BUB1BO60566 1050 aaPredicted RBP10.09□□□□□ -0.79
SYNE3-205ENST00000557275 NEDD9Q14511 834 aa10.09□□□□□ -0.79
SYNE3-205ENST00000557275 ZC4H2Q9NQZ6 224 aa10.09□□□□□ -0.79
SYNE3-205ENST00000557275 HS1BP3Q53T59 392 aa10.09□□□□□ -0.79
SYNE3-205ENST00000557275 CAPN2P17655 700 aa10.09□□□□□ -0.79
SYNE3-205ENST00000557275 SPAG5Q96R06 1193 aa10.09□□□□□ -0.79
SYNE3-205ENST00000557275 LUC7L3O95232 432 aaKnown RBP10.08□□□□□ -0.8
SYNE3-205ENST00000557275 TBC1D31Q96DN5 1066 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 TAF7Q15545 349 aaPredicted RBP10.08□□□□□ -0.8
SYNE3-205ENST00000557275 CPLX4Q7Z7G2 160 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 RNF41Q9H4P4 317 aaPredicted RBP10.08□□□□□ -0.8
SYNE3-205ENST00000557275 TTC36A6NLP5 189 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 SURF6O75683 361 aaKnown RBP10.08□□□□□ -0.8
SYNE3-205ENST00000557275 BAG4O95429 457 aaKnown RBP10.08□□□□□ -0.8
SYNE3-205ENST00000557275 VAV2P52735 878 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 SLF2Q8IX21 1173 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 FYCO1Q9BQS8 1478 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 CALML4Q96GE6 196 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 TCP11L1Q9NUJ3 509 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 TMOD2Q9NZR1 351 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 PPFIA3O75145 1194 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 LRSAM1Q6UWE0 723 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 SRGAP1Q7Z6B7 1085 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 MCM4P33991 863 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 ARL1P40616 181 aaPredicted RBP10.08□□□□□ -0.8
SYNE3-205ENST00000557275 CNNM1Q9NRU3 951 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 PDRG1Q9NUG6 133 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 KRT86O43790 486 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 FAN1Q9Y2M0 1017 aa10.08□□□□□ -0.8
SYNE3-205ENST00000557275 CCDC62Q6P9F0 684 aa10.07□□□□□ -0.8
SYNE3-205ENST00000557275 ZNF710Q8N1W2 664 aa10.07□□□□□ -0.8
SYNE3-205ENST00000557275 Q9H521 79 aa10.07□□□□□ -0.8
SYNE3-205ENST00000557275 ATAD2Q6PL18 1390 aa10.07□□□□□ -0.8
SYNE3-205ENST00000557275 MIER3Q7Z3K6 550 aa10.07□□□□□ -0.8
SYNE3-205ENST00000557275 SYTL4Q96C24 671 aaPredicted RBP10.07□□□□□ -0.8
SYNE3-205ENST00000557275 CTAGE15A4D2H0 777 aa10.07□□□□□ -0.8
SYNE3-205ENST00000557275 CTAGE8P0CG41 777 aa10.07□□□□□ -0.8
SYNE3-205ENST00000557275 CTAGE4Q8IX94 777 aa10.07□□□□□ -0.8
SYNE3-205ENST00000557275 SYCE3A1L190 88 aa10.07□□□□□ -0.8
SYNE3-205ENST00000557275 APBB1IPQ7Z5R6 666 aaPredicted RBP10.07□□□□□ -0.8
SYNE3-205ENST00000557275 MPHOSPH8Q99549 860 aa10.07□□□□□ -0.8
SYNE3-205ENST00000557275 PLIN1O60240 522 aa10.07□□□□□ -0.8
SYNE3-205ENST00000557275 MAPK8IP2Q13387 824 aaPredicted RBP10.07□□□□□ -0.8
SYNE3-205ENST00000557275 NBPF11Q86T75 865 aa10.07□□□□□ -0.8
SYNE3-205ENST00000557275 SPATS2Q86XZ4 545 aaKnown RBP10.07□□□□□ -0.8
SYNE3-205ENST00000557275 POLE3Q9NRF9 147 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms