RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 C16orf71Q8IYS4 520 aaPredicted RBP29.72■■■□□ 2.35
PABPN1-207ENST00000556821 TSPYL4Q9UJ04 414 aa29.72■■■□□ 2.35
PABPN1-207ENST00000556821 ANP32CO43423 234 aa29.71■■■□□ 2.35
PABPN1-207ENST00000556821 COL11A2P13942 1736 aaPredicted RBP29.71■■■□□ 2.35
PABPN1-207ENST00000556821 CACNA1SQ13698 1873 aa29.7■■■□□ 2.35
PABPN1-207ENST00000556821 CAMTA2O94983 1202 aa29.7■■■□□ 2.35
PABPN1-207ENST00000556821 BABAM1Q9NWV8 329 aa29.7■■■□□ 2.35
PABPN1-207ENST00000556821 APAF1O14727 1248 aa29.69■■■□□ 2.34
PABPN1-207ENST00000556821 TBC1D9BQ66K14 1250 aa29.68■■■□□ 2.34
PABPN1-207ENST00000556821 DZIP3Q86Y13 1208 aaKnown RBP29.68■■■□□ 2.34
PABPN1-207ENST00000556821 RRAGCQ9HB90 399 aa29.68■■■□□ 2.34
PABPN1-207ENST00000556821 KDM2BQ8NHM5 1336 aa29.67■■■□□ 2.34
PABPN1-207ENST00000556821 ANKRD36CQ5JPF3 1778 aa29.67■■■□□ 2.34
PABPN1-207ENST00000556821 CARMIL3Q8ND23 1372 aa29.65■■■□□ 2.34
PABPN1-207ENST00000556821 CHL1O00533 1208 aa29.65■■■□□ 2.34
PABPN1-207ENST00000556821 SERPINB2P05120 415 aa29.65■■■□□ 2.34
PABPN1-207ENST00000556821 BICDL1Q6ZP65 573 aa29.65■■■□□ 2.34
PABPN1-207ENST00000556821 NPM2Q86SE8 214 aaKnown RBP29.65■■■□□ 2.34
PABPN1-207ENST00000556821 MRS2Q9HD23 443 aa29.65■■■□□ 2.34
PABPN1-207ENST00000556821 PIM2Q9P1W9 311 aa29.64■■■□□ 2.34
PABPN1-207ENST00000556821 SMC1BQ8NDV3 1235 aa29.62■■■□□ 2.33
PABPN1-207ENST00000556821 ARFGEF2Q9Y6D5 1785 aa29.62■■■□□ 2.33
PABPN1-207ENST00000556821 RNF181Q9P0P0 153 aa29.61■■■□□ 2.33
PABPN1-207ENST00000556821 SBF1O95248 1867 aa29.61■■■□□ 2.33
PABPN1-207ENST00000556821 KRT24Q2M2I5 525 aa29.59■■■□□ 2.33
PABPN1-207ENST00000556821 DALRD3Q5D0E6 543 aaKnown RBP29.59■■■□□ 2.33
PABPN1-207ENST00000556821 LAS1LQ9Y4W2 734 aaKnown RBP29.59■■■□□ 2.33
PABPN1-207ENST00000556821 ERBB4Q15303 1308 aa29.59■■■□□ 2.33
PABPN1-207ENST00000556821 HSPA1AP0DMV8 641 aaKnown RBP29.58■■■□□ 2.33
PABPN1-207ENST00000556821 HSPA1BP0DMV9 641 aaKnown RBP29.58■■■□□ 2.33
PABPN1-207ENST00000556821 CHRNA5P30532 468 aa29.58■■■□□ 2.33
PABPN1-207ENST00000556821 CCDC88AQ3V6T2 1871 aa29.58■■■□□ 2.33
PABPN1-207ENST00000556821 CLEC4GQ6UXB4 293 aa29.57■■■□□ 2.32
PABPN1-207ENST00000556821 CFAP44Q96MT7 982 aa29.57■■■□□ 2.32
PABPN1-207ENST00000556821 RGL2O15211 777 aa29.56■■■□□ 2.32
PABPN1-207ENST00000556821 LRP10Q7Z4F1 713 aa29.56■■■□□ 2.32
PABPN1-207ENST00000556821 ZNF853P0CG23 659 aa29.55■■■□□ 2.32
PABPN1-207ENST00000556821 MYL6BP14649 208 aa29.55■■■□□ 2.32
PABPN1-207ENST00000556821 PDIA6Q15084 440 aa29.55■■■□□ 2.32
PABPN1-207ENST00000556821 PRR5LQ6MZQ0 368 aa29.55■■■□□ 2.32
PABPN1-207ENST00000556821 NGEFQ8N5V2 710 aa29.55■■■□□ 2.32
PABPN1-207ENST00000556821 SETDB2Q96T68 719 aa29.55■■■□□ 2.32
PABPN1-207ENST00000556821 ZNF652Q9Y2D9 606 aa29.55■■■□□ 2.32
PABPN1-207ENST00000556821 TNRC6CQ9HCJ0 1690 aaKnown RBP29.54■■■□□ 2.32
PABPN1-207ENST00000556821 EIF2S2P20042 333 aaKnown RBP29.54■■■□□ 2.32
PABPN1-207ENST00000556821 HLFQ16534 295 aa29.54■■■□□ 2.32
PABPN1-207ENST00000556821 TTLL7Q6ZT98 887 aa29.54■■■□□ 2.32
PABPN1-207ENST00000556821 MBIPQ9NS73 344 aa29.54■■■□□ 2.32
PABPN1-207ENST00000556821 PCNTO95613 3336 aa29.54■■■□□ 2.32
PABPN1-207ENST00000556821 MAP3K15Q6ZN16 1313 aa29.52■■■□□ 2.32
PABPN1-207ENST00000556821 PROSER3Q2NL68 480 aa29.52■■■□□ 2.32
PABPN1-207ENST00000556821 ZC3H4Q9UPT8 1303 aaKnown RBP29.51■■■□□ 2.32
PABPN1-207ENST00000556821 SLX4Q8IY92 1834 aa29.51■■■□□ 2.31
PABPN1-207ENST00000556821 CCDC24Q8N4L8 307 aa29.51■■■□□ 2.31
PABPN1-207ENST00000556821 IFT57Q9NWB7 429 aa29.51■■■□□ 2.31
PABPN1-207ENST00000556821 ANXA1P04083 346 aa29.5■■■□□ 2.31
PABPN1-207ENST00000556821 ERVV-1B6SEH8 477 aa29.49■■■□□ 2.31
PABPN1-207ENST00000556821 CNBD1Q8NA66 436 aa29.49■■■□□ 2.31
PABPN1-207ENST00000556821 NECTIN2Q92692 538 aa29.49■■■□□ 2.31
PABPN1-207ENST00000556821 NIP7Q9Y221 180 aaKnown RBP eCLIP29.49■■■□□ 2.31
PABPN1-207ENST00000556821 FER1L6Q2WGJ9 1857 aa29.48■■■□□ 2.31
PABPN1-207ENST00000556821 GNAI1P63096 354 aa29.48■■■□□ 2.31
PABPN1-207ENST00000556821 CALD1Q05682 793 aaKnown RBP29.48■■■□□ 2.31
PABPN1-207ENST00000556821 LAMB2P55268 1798 aa29.47■■■□□ 2.31
PABPN1-207ENST00000556821 GLTPD2A6NH11 291 aa29.47■■■□□ 2.31
PABPN1-207ENST00000556821 HOXB7P09629 217 aa29.47■■■□□ 2.31
PABPN1-207ENST00000556821 VEGFAP15692 232 aaPredicted RBP29.47■■■□□ 2.31
PABPN1-207ENST00000556821 CCDC27Q2M243 656 aa29.47■■■□□ 2.31
PABPN1-207ENST00000556821 KIF6Q6ZMV9 814 aa29.47■■■□□ 2.31
PABPN1-207ENST00000556821 ZBTB3Q9H5J0 574 aa29.47■■■□□ 2.31
PABPN1-207ENST00000556821 C2CD5Q86YS7 1000 aa29.46■■■□□ 2.31
PABPN1-207ENST00000556821 BRIP1Q9BX63 1249 aa29.46■■■□□ 2.31
PABPN1-207ENST00000556821 CACNA1FO60840 1977 aa29.45■■■□□ 2.31
PABPN1-207ENST00000556821 NBPF5PQ86XG9 351 aaPredicted RBP29.45■■■□□ 2.31
PABPN1-207ENST00000556821 DUSP27Q5VZP5 1158 aa29.44■■■□□ 2.3
PABPN1-207ENST00000556821 WWC1Q8IX03 1113 aa29.44■■■□□ 2.3
PABPN1-207ENST00000556821 DICER1Q9UPY3 1922 aaKnown RBP29.43■■■□□ 2.3
PABPN1-207ENST00000556821 POTECB2RU33 542 aa29.43■■■□□ 2.3
PABPN1-207ENST00000556821 HDGFL1Q5TGJ6 251 aa29.43■■■□□ 2.3
PABPN1-207ENST00000556821 DDX21Q9NR30 783 aaKnown RBP eCLIP29.43■■■□□ 2.3
PABPN1-207ENST00000556821 CHPF2Q9P2E5 772 aa29.43■■■□□ 2.3
PABPN1-207ENST00000556821 H0YIN7 160 aa29.42■■■□□ 2.3
PABPN1-207ENST00000556821 PDE6BP35913 854 aa29.42■■■□□ 2.3
PABPN1-207ENST00000556821 ST5P78524 1137 aa29.42■■■□□ 2.3
PABPN1-207ENST00000556821 RASSF7Q02833 373 aa29.42■■■□□ 2.3
PABPN1-207ENST00000556821 NCBP3Q53F19 620 aaKnown RBP29.42■■■□□ 2.3
PABPN1-207ENST00000556821 UBN2Q6ZU65 1347 aa29.42■■■□□ 2.3
PABPN1-207ENST00000556821 GIGYF2Q6Y7W6 1299 aaKnown RBP29.41■■■□□ 2.3
PABPN1-207ENST00000556821 NPHP1O15259 732 aa29.4■■■□□ 2.3
PABPN1-207ENST00000556821 LMNB1P20700 586 aa29.4■■■□□ 2.3
PABPN1-207ENST00000556821 TIAM2Q8IVF5 1701 aa29.4■■■□□ 2.3
PABPN1-207ENST00000556821 ABCC12Q96J65 1359 aa29.39■■■□□ 2.3
PABPN1-207ENST00000556821 IBTKQ9P2D0 1353 aaPredicted RBP29.39■■■□□ 2.3
PABPN1-207ENST00000556821 FAM177BA6PVY3 158 aa29.39■■■□□ 2.3
PABPN1-207ENST00000556821 SLC34A2O95436 690 aa29.39■■■□□ 2.3
PABPN1-207ENST00000556821 COPS6Q7L5N1 327 aa29.39■■■□□ 2.3
PABPN1-207ENST00000556821 ZNF34Q8IZ26 560 aa29.39■■■□□ 2.3
PABPN1-207ENST00000556821 FAM9BQ8IZU0 186 aa29.39■■■□□ 2.3
PABPN1-207ENST00000556821 XAGE3Q8WTP9 111 aa29.39■■■□□ 2.3
PABPN1-207ENST00000556821 PDZRN3Q9UPQ7 1066 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms