RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 CHPF2Q9P2E5 772 aa31.78■■■□□ 2.68
SDR39U1-221ENST00000556707 MYH16Q9H6N6 1097 aa31.77■■■□□ 2.68
SDR39U1-221ENST00000556707 ZNF652Q9Y2D9 606 aa31.77■■■□□ 2.68
SDR39U1-221ENST00000556707 NRXN2Q9P2S2 1712 aa31.77■■■□□ 2.68
SDR39U1-221ENST00000556707 KIF6Q6ZMV9 814 aa31.76■■■□□ 2.67
SDR39U1-221ENST00000556707 BICDL1Q6ZP65 573 aa31.76■■■□□ 2.67
SDR39U1-221ENST00000556707 CHMP4AQ9BY43 222 aa31.76■■■□□ 2.67
SDR39U1-221ENST00000556707 DBF4Q9UBU7 674 aaPredicted RBP31.76■■■□□ 2.67
SDR39U1-221ENST00000556707 MAP3K15Q6ZN16 1313 aa31.75■■■□□ 2.67
SDR39U1-221ENST00000556707 ERVV-1B6SEH8 477 aa31.75■■■□□ 2.67
SDR39U1-221ENST00000556707 GOLGA2Q08379 1002 aa31.75■■■□□ 2.67
SDR39U1-221ENST00000556707 C10orf71Q711Q0 1435 aa31.74■■■□□ 2.67
SDR39U1-221ENST00000556707 CACNA1FO60840 1977 aa31.74■■■□□ 2.67
SDR39U1-221ENST00000556707 TWISTNBQ3B726 338 aaPredicted RBP31.73■■■□□ 2.67
SDR39U1-221ENST00000556707 NLGN2Q8NFZ4 835 aa31.73■■■□□ 2.67
SDR39U1-221ENST00000556707 HLFQ16534 295 aa31.72■■■□□ 2.67
SDR39U1-221ENST00000556707 CARMIL3Q8ND23 1372 aa31.71■■■□□ 2.67
SDR39U1-221ENST00000556707 SERPINB2P05120 415 aa31.71■■■□□ 2.67
SDR39U1-221ENST00000556707 CCDC30Q5VVM6 783 aa31.71■■■□□ 2.67
SDR39U1-221ENST00000556707 COPS6Q7L5N1 327 aa31.71■■■□□ 2.67
SDR39U1-221ENST00000556707 XAGE3Q8WTP9 111 aa31.71■■■□□ 2.67
SDR39U1-221ENST00000556707 SETDB2Q96T68 719 aa31.71■■■□□ 2.67
SDR39U1-221ENST00000556707 HYPKQ9NX55 129 aa31.71■■■□□ 2.67
SDR39U1-221ENST00000556707 EXOSC9Q06265 439 aaKnown RBP31.7■■■□□ 2.67
SDR39U1-221ENST00000556707 ZBTB3Q9H5J0 574 aa31.7■■■□□ 2.67
SDR39U1-221ENST00000556707 AIMP1Q12904 312 aaKnown RBP31.69■■■□□ 2.66
SDR39U1-221ENST00000556707 E9PSI1 815 aa31.68■■■□□ 2.66
SDR39U1-221ENST00000556707 KIAA1551Q9HCM1 1747 aa31.67■■■□□ 2.66
SDR39U1-221ENST00000556707 N4BP2Q86UW6 1770 aaPredicted RBP31.67■■■□□ 2.66
SDR39U1-221ENST00000556707 GIGYF2Q6Y7W6 1299 aaKnown RBP31.67■■■□□ 2.66
SDR39U1-221ENST00000556707 NIP7Q9Y221 180 aaKnown RBP eCLIP31.67■■■□□ 2.66
SDR39U1-221ENST00000556707 ATP10DQ9P241 1426 aa31.66■■■□□ 2.66
SDR39U1-221ENST00000556707 VAMP4O75379 141 aa31.65■■■□□ 2.66
SDR39U1-221ENST00000556707 SLFN5Q08AF3 891 aa31.65■■■□□ 2.66
SDR39U1-221ENST00000556707 ANKRD36CQ5JPF3 1778 aa31.65■■■□□ 2.66
SDR39U1-221ENST00000556707 TGFB2P61812 414 aa31.63■■■□□ 2.65
SDR39U1-221ENST00000556707 STK31Q9BXU1 1019 aa31.63■■■□□ 2.65
SDR39U1-221ENST00000556707 PXDNLA1KZ92 1463 aa31.62■■■□□ 2.65
SDR39U1-221ENST00000556707 ANKRD31Q8N7Z5 1873 aa31.62■■■□□ 2.65
SDR39U1-221ENST00000556707 PLBD2Q8NHP8 589 aa31.61■■■□□ 2.65
SDR39U1-221ENST00000556707 CDCA7LQ96GN5 454 aa31.61■■■□□ 2.65
SDR39U1-221ENST00000556707 PHAXQ9H814 394 aaKnown RBP31.61■■■□□ 2.65
SDR39U1-221ENST00000556707 PRR5LQ6MZQ0 368 aa31.6■■■□□ 2.65
SDR39U1-221ENST00000556707 ANKRD13DQ6ZTN6 518 aa31.6■■■□□ 2.65
SDR39U1-221ENST00000556707 NBPF5PQ86XG9 351 aaPredicted RBP31.6■■■□□ 2.65
SDR39U1-221ENST00000556707 ZNF34Q8IZ26 560 aa31.6■■■□□ 2.65
SDR39U1-221ENST00000556707 CNBD1Q8NA66 436 aa31.6■■■□□ 2.65
SDR39U1-221ENST00000556707 ARFGEF2Q9Y6D5 1785 aa31.6■■■□□ 2.65
SDR39U1-221ENST00000556707 BRCA1P38398 1863 aaKnown RBP31.59■■■□□ 2.65
SDR39U1-221ENST00000556707 DCAF8L1A6NGE4 600 aa31.59■■■□□ 2.65
SDR39U1-221ENST00000556707 TCERG1O14776 1098 aaKnown RBP31.59■■■□□ 2.65
SDR39U1-221ENST00000556707 HNRNPUQ00839 825 aaKnown RBP eCLIP31.59■■■□□ 2.65
SDR39U1-221ENST00000556707 GPTP24298 496 aa31.58■■■□□ 2.65
SDR39U1-221ENST00000556707 HSP90AB3PQ58FF7 597 aa31.58■■■□□ 2.65
SDR39U1-221ENST00000556707 NPHP1O15259 732 aa31.57■■■□□ 2.64
SDR39U1-221ENST00000556707 TRMT2AQ8IZ69 625 aaKnown RBP31.57■■■□□ 2.64
SDR39U1-221ENST00000556707 UBN2Q6ZU65 1347 aa31.56■■■□□ 2.64
SDR39U1-221ENST00000556707 A0A0G2JLW4 131 aa31.56■■■□□ 2.64
SDR39U1-221ENST00000556707 DPEP1P16444 411 aa31.56■■■□□ 2.64
SDR39U1-221ENST00000556707 TPTE2Q6XPS3 522 aa31.56■■■□□ 2.64
SDR39U1-221ENST00000556707 SLC4A2P04920 1241 aa31.55■■■□□ 2.64
SDR39U1-221ENST00000556707 ST5P78524 1137 aa31.55■■■□□ 2.64
SDR39U1-221ENST00000556707 TCIRG1Q13488 830 aa31.55■■■□□ 2.64
SDR39U1-221ENST00000556707 DLEC1Q9Y238 1755 aa31.54■■■□□ 2.64
SDR39U1-221ENST00000556707 FAM177BA6PVY3 158 aa31.54■■■□□ 2.64
SDR39U1-221ENST00000556707 PARP10Q53GL7 1025 aa31.54■■■□□ 2.64
SDR39U1-221ENST00000556707 CCDC24Q8N4L8 307 aa31.54■■■□□ 2.64
SDR39U1-221ENST00000556707 BRIP1Q9BX63 1249 aa31.54■■■□□ 2.64
SDR39U1-221ENST00000556707 NYXQ9GZU5 481 aa31.54■■■□□ 2.64
SDR39U1-221ENST00000556707 IBTKQ9P2D0 1353 aaPredicted RBP31.54■■■□□ 2.64
SDR39U1-221ENST00000556707 GOLGB1Q14789 3259 aaKnown RBP31.53■■■□□ 2.64
SDR39U1-221ENST00000556707 GPR162Q16538 588 aa31.53■■■□□ 2.64
SDR39U1-221ENST00000556707 DDX58O95786 925 aaKnown RBP31.52■■■□□ 2.64
SDR39U1-221ENST00000556707 KCNA3P22001 575 aa31.52■■■□□ 2.64
SDR39U1-221ENST00000556707 SUSD4Q5VX71 490 aa31.52■■■□□ 2.64
SDR39U1-221ENST00000556707 RIC3Q7Z5B4 369 aa31.52■■■□□ 2.64
SDR39U1-221ENST00000556707 CHRNA5P30532 468 aa31.51■■■□□ 2.63
SDR39U1-221ENST00000556707 G2E3Q7L622 706 aa31.51■■■□□ 2.63
SDR39U1-221ENST00000556707 PELP1Q8IZL8 1130 aaKnown RBP31.51■■■□□ 2.63
SDR39U1-221ENST00000556707 PDE6BP35913 854 aa31.5■■■□□ 2.63
SDR39U1-221ENST00000556707 PPP1R42Q7Z4L9 355 aa31.5■■■□□ 2.63
SDR39U1-221ENST00000556707 YBX3P16989 372 aaKnown RBP eCLIP31.49■■■□□ 2.63
SDR39U1-221ENST00000556707 GTF2E1P29083 439 aaPredicted RBP31.49■■■□□ 2.63
SDR39U1-221ENST00000556707 PDZRN3Q9UPQ7 1066 aa31.49■■■□□ 2.63
SDR39U1-221ENST00000556707 COL11A2P13942 1736 aaPredicted RBP31.49■■■□□ 2.63
SDR39U1-221ENST00000556707 NTSR2O95665 410 aa31.48■■■□□ 2.63
SDR39U1-221ENST00000556707 NLRP10Q86W26 655 aa31.48■■■□□ 2.63
SDR39U1-221ENST00000556707 C2CD5Q86YS7 1000 aa31.48■■■□□ 2.63
SDR39U1-221ENST00000556707 ISCA1Q9BUE6 129 aa31.48■■■□□ 2.63
SDR39U1-221ENST00000556707 WWC3Q9ULE0 1092 aa31.48■■■□□ 2.63
SDR39U1-221ENST00000556707 FLIIQ13045 1269 aa31.47■■■□□ 2.63
SDR39U1-221ENST00000556707 NUTM1Q86Y26 1132 aa31.47■■■□□ 2.63
SDR39U1-221ENST00000556707 PIM2Q9P1W9 311 aa31.47■■■□□ 2.63
SDR39U1-221ENST00000556707 ARFGEF1Q9Y6D6 1849 aa31.47■■■□□ 2.63
SDR39U1-221ENST00000556707 H0YIN7 160 aa31.46■■■□□ 2.63
SDR39U1-221ENST00000556707 KSR2Q6VAB6 950 aa31.46■■■□□ 2.63
SDR39U1-221ENST00000556707 UTP14AQ9BVJ6 771 aaKnown RBP31.46■■■□□ 2.63
SDR39U1-221ENST00000556707 PI4KAP2A4QPH2 592 aa31.45■■■□□ 2.63
SDR39U1-221ENST00000556707 TRIM28Q13263 835 aaKnown RBP31.45■■■□□ 2.63
SDR39U1-221ENST00000556707 ERFEQ4G0M1 354 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms