RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 ADRA2BP18089 450 aa22.25■■□□□ 1.15
TUBB3-211ENST00000556536 NPM2Q86SE8 214 aaKnown RBP22.25■■□□□ 1.15
TUBB3-211ENST00000556536 DZIP3Q86Y13 1208 aaKnown RBP22.25■■□□□ 1.15
TUBB3-211ENST00000556536 SGIP1Q9BQI5 828 aa22.25■■□□□ 1.15
TUBB3-211ENST00000556536 NOB1Q9ULX3 412 aaKnown RBP22.25■■□□□ 1.15
TUBB3-211ENST00000556536 SRP68Q9UHB9 627 aaKnown RBP22.24■■□□□ 1.15
TUBB3-211ENST00000556536 UBR3Q6ZT12 1888 aa22.24■■□□□ 1.15
TUBB3-211ENST00000556536 CHD4Q14839 1912 aa22.23■■□□□ 1.15
TUBB3-211ENST00000556536 CAMTA2O94983 1202 aa22.22■■□□□ 1.15
TUBB3-211ENST00000556536 RFC4P35249 363 aa22.22■■□□□ 1.15
TUBB3-211ENST00000556536 KIF6Q6ZMV9 814 aa22.22■■□□□ 1.15
TUBB3-211ENST00000556536 FLAD1Q8NFF5 587 aa22.22■■□□□ 1.15
TUBB3-211ENST00000556536 FRAT1Q92837 279 aaPredicted RBP22.22■■□□□ 1.15
TUBB3-211ENST00000556536 ZBTB3Q9H5J0 574 aa22.22■■□□□ 1.15
TUBB3-211ENST00000556536 NARFQ9UHQ1 456 aa22.22■■□□□ 1.15
TUBB3-211ENST00000556536 MSH5O43196 834 aa22.21■■□□□ 1.15
TUBB3-211ENST00000556536 C1QTNF8P60827 252 aa22.21■■□□□ 1.15
TUBB3-211ENST00000556536 FKBP5Q13451 457 aaPredicted RBP22.21■■□□□ 1.15
TUBB3-211ENST00000556536 USPL1Q5W0Q7 1092 aa22.21■■□□□ 1.15
TUBB3-211ENST00000556536 ANKRD13DQ6ZTN6 518 aa22.21■■□□□ 1.15
TUBB3-211ENST00000556536 MAP3K15Q6ZN16 1313 aa22.21■■□□□ 1.15
TUBB3-211ENST00000556536 USP42Q9H9J4 1324 aaKnown RBP22.21■■□□□ 1.15
TUBB3-211ENST00000556536 TUBGCP6Q96RT7 1819 aa22.2■■□□□ 1.14
TUBB3-211ENST00000556536 HLFQ16534 295 aa22.2■■□□□ 1.14
TUBB3-211ENST00000556536 PLBD2Q8NHP8 589 aa22.2■■□□□ 1.14
TUBB3-211ENST00000556536 BCL2L12Q9HB09 334 aa22.2■■□□□ 1.14
TUBB3-211ENST00000556536 KIF16BQ96L93 1317 aa22.2■■□□□ 1.14
TUBB3-211ENST00000556536 ADCY9O60503 1353 aa22.2■■□□□ 1.14
TUBB3-211ENST00000556536 PI4KAP2A4QPH2 592 aa22.19■■□□□ 1.14
TUBB3-211ENST00000556536 ZPR1O75312 459 aa22.19■■□□□ 1.14
TUBB3-211ENST00000556536 DDX58O95786 925 aaKnown RBP22.19■■□□□ 1.14
TUBB3-211ENST00000556536 KSR2Q6VAB6 950 aa22.19■■□□□ 1.14
TUBB3-211ENST00000556536 PI4KAP1Q8N8J0 262 aa22.19■■□□□ 1.14
TUBB3-211ENST00000556536 TNNQ9UQP3 1299 aa22.19■■□□□ 1.14
TUBB3-211ENST00000556536 PTPRCP08575 1304 aa22.19■■□□□ 1.14
TUBB3-211ENST00000556536 ERVV-1B6SEH8 477 aa22.18■■□□□ 1.14
TUBB3-211ENST00000556536 F6X3S4 739 aa22.18■■□□□ 1.14
TUBB3-211ENST00000556536 RIC3Q7Z5B4 369 aa22.18■■□□□ 1.14
TUBB3-211ENST00000556536 MAP3K2Q9Y2U5 619 aa22.18■■□□□ 1.14
TUBB3-211ENST00000556536 PLIN1O60240 522 aa22.17■■□□□ 1.14
TUBB3-211ENST00000556536 CENPBP07199 599 aaPredicted RBP22.17■■□□□ 1.14
TUBB3-211ENST00000556536 GYS1P13807 737 aa22.17■■□□□ 1.14
TUBB3-211ENST00000556536 ZKSCAN2Q63HK3 967 aa22.16■■□□□ 1.14
TUBB3-211ENST00000556536 ARHGAP45Q92619 1136 aa22.16■■□□□ 1.14
TUBB3-211ENST00000556536 C4AP0C0L4 1744 aa22.16■■□□□ 1.14
TUBB3-211ENST00000556536 IPO8O15397 1037 aaKnown RBP22.15■■□□□ 1.14
TUBB3-211ENST00000556536 TRIM27P14373 513 aa22.15■■□□□ 1.14
TUBB3-211ENST00000556536 FKBP8Q14318 412 aa22.15■■□□□ 1.14
TUBB3-211ENST00000556536 ATF7IPQ6VMQ6 1270 aa22.15■■□□□ 1.14
TUBB3-211ENST00000556536 GIGYF2Q6Y7W6 1299 aaKnown RBP22.15■■□□□ 1.14
TUBB3-211ENST00000556536 API5Q9BZZ5 524 aaKnown RBP22.15■■□□□ 1.14
TUBB3-211ENST00000556536 DNAAF4Q8WXU2 420 aa22.14■■□□□ 1.13
TUBB3-211ENST00000556536 METTL22Q9BUU2 404 aaPredicted RBP22.14■■□□□ 1.13
TUBB3-211ENST00000556536 QSER1Q2KHR3 1735 aa22.14■■□□□ 1.13
TUBB3-211ENST00000556536 RRP1P56182 461 aaKnown RBP22.13■■□□□ 1.13
TUBB3-211ENST00000556536 CLEC4GQ6UXB4 293 aa22.13■■□□□ 1.13
TUBB3-211ENST00000556536 MYD88Q99836 296 aa22.13■■□□□ 1.13
TUBB3-211ENST00000556536 SCN7AQ01118 1682 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 RGL2O15211 777 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 TCIRG1Q13488 830 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 GPR162Q16538 588 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 TBC1D9BQ66K14 1250 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 MSL1Q68DK7 614 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 SLC4A10Q6U841 1118 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 CLUAP1Q96AJ1 413 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 ZNF652Q9Y2D9 606 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 SUPT16HQ9Y5B9 1047 aaKnown RBP22.12■■□□□ 1.13
TUBB3-211ENST00000556536 GOLGB1Q14789 3259 aaKnown RBP22.11■■□□□ 1.13
TUBB3-211ENST00000556536 ATP5J2-PTCD1G3V325 749 aa22.11■■□□□ 1.13
TUBB3-211ENST00000556536 ABCC4O15439 1325 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 RNF123Q5XPI4 1314 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 BCORQ6W2J9 1755 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 IGKV5-2P06315 115 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 GPTP24298 496 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 BEND3Q5T5X7 828 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 BICDL1Q6ZP65 573 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 ZNF34Q8IZ26 560 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 ISCA1Q9BUE6 129 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 CACNA1FO60840 1977 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 ATP10DQ9P241 1426 aa22.09■■□□□ 1.13
TUBB3-211ENST00000556536 RLBP1P12271 317 aa22.09■■□□□ 1.13
TUBB3-211ENST00000556536 NFIXQ14938 502 aa22.09■■□□□ 1.13
TUBB3-211ENST00000556536 HSP90AB3PQ58FF7 597 aa22.09■■□□□ 1.13
TUBB3-211ENST00000556536 C20orf194Q5TEA3 1177 aa22.09■■□□□ 1.13
TUBB3-211ENST00000556536 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.09■■□□□ 1.13
TUBB3-211ENST00000556536 SLC16A10Q8TF71 515 aa22.09■■□□□ 1.13
TUBB3-211ENST00000556536 UBN2Q6ZU65 1347 aa22.08■■□□□ 1.13
TUBB3-211ENST00000556536 TM4SF1P30408 202 aa22.08■■□□□ 1.13
TUBB3-211ENST00000556536 CWF19L2Q2TBE0 894 aaKnown RBP22.08■■□□□ 1.13
TUBB3-211ENST00000556536 DZIP1LQ8IYY4 767 aaKnown RBP22.08■■□□□ 1.13
TUBB3-211ENST00000556536 NLGN1Q8N2Q7 840 aa22.08■■□□□ 1.13
TUBB3-211ENST00000556536 PANK1Q8TE04 598 aa22.08■■□□□ 1.13
TUBB3-211ENST00000556536 NIP7Q9Y221 180 aaKnown RBP eCLIP22.08■■□□□ 1.13
TUBB3-211ENST00000556536 ARFGEF2Q9Y6D5 1785 aa22.07■■□□□ 1.12
TUBB3-211ENST00000556536 NEXNQ0ZGT2 675 aa22.07■■□□□ 1.12
TUBB3-211ENST00000556536 LINS1Q8NG48 757 aa22.07■■□□□ 1.12
TUBB3-211ENST00000556536 NEURL1BA8MQ27 555 aa22.06■■□□□ 1.12
TUBB3-211ENST00000556536 POLD1P28340 1107 aa22.06■■□□□ 1.12
TUBB3-211ENST00000556536 DDR1Q08345 913 aa22.06■■□□□ 1.12
TUBB3-211ENST00000556536 TRIM28Q13263 835 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms