RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 TOPAZ1Q8N9V7 1692 aa10.21□□□□□ -0.77
MARK3-210ENST00000556463 HMMRO75330 724 aa10.21□□□□□ -0.77
MARK3-210ENST00000556463 TPM3P06753 285 aa10.21□□□□□ -0.77
MARK3-210ENST00000556463 PRR29P0C7W0 189 aa10.21□□□□□ -0.77
MARK3-210ENST00000556463 STK26Q9P289 416 aa10.21□□□□□ -0.77
MARK3-210ENST00000556463 KCNG1Q9UIX4 513 aa10.21□□□□□ -0.77
MARK3-210ENST00000556463 DCTN1Q14203 1278 aa10.21□□□□□ -0.78
MARK3-210ENST00000556463 BCCIPQ9P287 314 aaKnown RBP eCLIP10.21□□□□□ -0.78
MARK3-210ENST00000556463 DCAF8L1A6NGE4 600 aa10.2□□□□□ -0.78
MARK3-210ENST00000556463 POLR3GO15318 223 aaPredicted RBP10.2□□□□□ -0.78
MARK3-210ENST00000556463 ZSCAN22P10073 491 aaPredicted RBP10.2□□□□□ -0.78
MARK3-210ENST00000556463 CCT4P50991 539 aaKnown RBP10.2□□□□□ -0.78
MARK3-210ENST00000556463 RTF1Q92541 710 aaKnown RBP10.2□□□□□ -0.78
MARK3-210ENST00000556463 KCNB2Q92953 911 aa10.2□□□□□ -0.78
MARK3-210ENST00000556463 FEZ1Q99689 392 aa10.2□□□□□ -0.78
MARK3-210ENST00000556463 GDPD2Q9HCC8 539 aa10.2□□□□□ -0.78
MARK3-210ENST00000556463 PYCARDQ9ULZ3 195 aa10.2□□□□□ -0.78
MARK3-210ENST00000556463 HCLS1P14317 486 aaPredicted RBP10.2□□□□□ -0.78
MARK3-210ENST00000556463 MCCP23508 829 aa10.2□□□□□ -0.78
MARK3-210ENST00000556463 KDM4CQ9H3R0 1056 aa10.2□□□□□ -0.78
MARK3-210ENST00000556463 DIAPH3Q9NSV4 1193 aa10.2□□□□□ -0.78
MARK3-210ENST00000556463 TECPR2O15040 1411 aa10.2□□□□□ -0.78
MARK3-210ENST00000556463 GOLGA6L6A8MZA4 724 aa10.19□□□□□ -0.78
MARK3-210ENST00000556463 HSP90B1P14625 803 aaKnown RBP10.19□□□□□ -0.78
MARK3-210ENST00000556463 ATP8B2P98198 1209 aa10.19□□□□□ -0.78
MARK3-210ENST00000556463 UNC5CLQ8IV45 518 aa10.19□□□□□ -0.78
MARK3-210ENST00000556463 FAM53CQ9NYF3 392 aa10.19□□□□□ -0.78
MARK3-210ENST00000556463 RIOK3O14730 519 aaKnown RBP10.19□□□□□ -0.78
MARK3-210ENST00000556463 CNPY2Q9Y2B0 182 aa10.19□□□□□ -0.78
MARK3-210ENST00000556463 OVOS2A0A0J9YW53 1432 aa10.19□□□□□ -0.78
MARK3-210ENST00000556463 OVOS2Q6IE36 1432 aa10.19□□□□□ -0.78
MARK3-210ENST00000556463 NME9Q86XW9 330 aa10.19□□□□□ -0.78
MARK3-210ENST00000556463 RAD50Q92878 1312 aa10.19□□□□□ -0.78
MARK3-210ENST00000556463 FMN2Q9NZ56 1722 aa10.18□□□□□ -0.78
MARK3-210ENST00000556463 RBM43Q6ZSC3 357 aaKnown RBP10.18□□□□□ -0.78
MARK3-210ENST00000556463 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.18□□□□□ -0.78
MARK3-210ENST00000556463 DRC1Q96MC2 740 aa10.18□□□□□ -0.78
MARK3-210ENST00000556463 LRRCC1Q9C099 1032 aa10.18□□□□□ -0.78
MARK3-210ENST00000556463 F13A1P00488 732 aa10.18□□□□□ -0.78
MARK3-210ENST00000556463 SYT1P21579 422 aa10.18□□□□□ -0.78
MARK3-210ENST00000556463 CLGNO14967 610 aa10.18□□□□□ -0.78
MARK3-210ENST00000556463 IBSPP21815 317 aaPredicted RBP10.18□□□□□ -0.78
MARK3-210ENST00000556463 NAA30Q147X3 362 aaPredicted RBP10.18□□□□□ -0.78
MARK3-210ENST00000556463 RUFY3Q7L099 469 aa10.18□□□□□ -0.78
MARK3-210ENST00000556463 LSG1Q9H089 658 aaKnown RBP10.18□□□□□ -0.78
MARK3-210ENST00000556463 ZRANB1Q9UGI0 708 aa10.18□□□□□ -0.78
MARK3-210ENST00000556463 USP42Q9H9J4 1324 aaKnown RBP10.17□□□□□ -0.78
MARK3-210ENST00000556463 STX6O43752 255 aa10.17□□□□□ -0.78
MARK3-210ENST00000556463 GNAI2P04899 355 aa10.17□□□□□ -0.78
MARK3-210ENST00000556463 NCBP1Q09161 790 aaKnown RBP10.17□□□□□ -0.78
MARK3-210ENST00000556463 SIRT1Q96EB6 747 aa10.17□□□□□ -0.78
MARK3-210ENST00000556463 C16orf45Q96MC5 204 aaPredicted RBP10.17□□□□□ -0.78
MARK3-210ENST00000556463 A2ML1A8K2U0 1454 aa10.17□□□□□ -0.78
MARK3-210ENST00000556463 EIF4A2Q14240 407 aaKnown RBP10.17□□□□□ -0.78
MARK3-210ENST00000556463 G2E3Q7L622 706 aa10.17□□□□□ -0.78
MARK3-210ENST00000556463 PI4K2BQ8TCG2 481 aa10.17□□□□□ -0.78
MARK3-210ENST00000556463 SNX14Q9Y5W7 946 aa10.17□□□□□ -0.78
MARK3-210ENST00000556463 ADGRL3Q9HAR2 1447 aa10.17□□□□□ -0.78
MARK3-210ENST00000556463 USP31Q70CQ4 1352 aa10.17□□□□□ -0.78
MARK3-210ENST00000556463 CCDC171Q6TFL3 1326 aa10.17□□□□□ -0.78
MARK3-210ENST00000556463 PNMA6EA0A0J9YXQ4 647 aa10.16□□□□□ -0.78
MARK3-210ENST00000556463 TESPA1A2RU30 521 aaPredicted RBP10.16□□□□□ -0.78
MARK3-210ENST00000556463 SGSM2O43147 1006 aa10.16□□□□□ -0.78
MARK3-210ENST00000556463 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.16□□□□□ -0.78
MARK3-210ENST00000556463 CTNNA3Q9UI47 895 aa10.16□□□□□ -0.78
MARK3-210ENST00000556463 SOS1Q07889 1333 aaPredicted RBP10.16□□□□□ -0.78
MARK3-210ENST00000556463 ST3GAL1Q11201 340 aa10.16□□□□□ -0.78
MARK3-210ENST00000556463 TSHZ3Q63HK5 1081 aa10.16□□□□□ -0.78
MARK3-210ENST00000556463 OGFRQ9NZT2 677 aa10.16□□□□□ -0.78
MARK3-210ENST00000556463 MTMR6Q9Y217 621 aa10.16□□□□□ -0.78
MARK3-210ENST00000556463 CHMP3Q9Y3E7 222 aa10.16□□□□□ -0.78
MARK3-210ENST00000556463 KDRP35968 1356 aa10.16□□□□□ -0.78
MARK3-210ENST00000556463 WASLO00401 505 aaPredicted RBP10.16□□□□□ -0.78
MARK3-210ENST00000556463 UPF3BQ9BZI7 483 aaKnown RBP10.16□□□□□ -0.78
MARK3-210ENST00000556463 ELP1O95163 1332 aa10.15□□□□□ -0.78
MARK3-210ENST00000556463 ANO2Q9NQ90 1003 aa10.15□□□□□ -0.78
MARK3-210ENST00000556463 HYPKQ9NX55 129 aa10.15□□□□□ -0.78
MARK3-210ENST00000556463 EXOC6BQ9Y2D4 811 aa10.15□□□□□ -0.78
MARK3-210ENST00000556463 PLA2G4DQ86XP0 818 aa10.15□□□□□ -0.78
MARK3-210ENST00000556463 SSH3Q8TE77 659 aa10.15□□□□□ -0.78
MARK3-210ENST00000556463 LIMCH1Q9UPQ0 1083 aa10.15□□□□□ -0.78
MARK3-210ENST00000556463 MORC2Q9Y6X9 1032 aaPredicted RBP10.15□□□□□ -0.78
MARK3-210ENST00000556463 AK2P54819 239 aa10.15□□□□□ -0.79
MARK3-210ENST00000556463 TTLL5Q6EMB2 1281 aa10.15□□□□□ -0.79
MARK3-210ENST00000556463 GTF3C6Q969F1 213 aa10.15□□□□□ -0.79
MARK3-210ENST00000556463 DDX41Q9UJV9 622 aaKnown RBP10.15□□□□□ -0.79
MARK3-210ENST00000556463 RIMS1Q86UR5 1692 aaKnown RBP10.15□□□□□ -0.79
MARK3-210ENST00000556463 GYS2P54840 703 aa10.14□□□□□ -0.79
MARK3-210ENST00000556463 TMED8Q6PL24 325 aaPredicted RBP10.14□□□□□ -0.79
MARK3-210ENST00000556463 RASEFQ8IZ41 740 aa10.14□□□□□ -0.79
MARK3-210ENST00000556463 TTC21AQ8NDW8 1320 aa10.14□□□□□ -0.79
MARK3-210ENST00000556463 DIP2AQ14689 1571 aa10.14□□□□□ -0.79
MARK3-210ENST00000556463 GABPB1Q06547 395 aaPredicted RBP10.14□□□□□ -0.79
MARK3-210ENST00000556463 RRS1Q15050 365 aaKnown RBP10.14□□□□□ -0.79
MARK3-210ENST00000556463 GIMAP6Q6P9H5 292 aa10.14□□□□□ -0.79
MARK3-210ENST00000556463 MCM10Q7L590 875 aa10.14□□□□□ -0.79
MARK3-210ENST00000556463 ST7Q9NRC1 585 aa10.14□□□□□ -0.79
MARK3-210ENST00000556463 KCND1Q9NSA2 647 aa10.14□□□□□ -0.79
MARK3-210ENST00000556463 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.14□□□□□ -0.79
MARK3-210ENST00000556463 MRVI1Q9Y6F6 885 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms