RNA–Protein interactions for RNA: ENST00000555658.5

FOXN3-210, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-210ENST00000555658 SLC9A9Q8IVB4 645 aa6.98□□□□□ -1.29
FOXN3-210ENST00000555658 SUV39H2Q9H5I1 410 aa6.98□□□□□ -1.29
FOXN3-210ENST00000555658 USP3Q9Y6I4 520 aa6.98□□□□□ -1.29
FOXN3-210ENST00000555658 EIF4G1Q04637 1599 aaKnown RBP6.98□□□□□ -1.29
FOXN3-210ENST00000555658 ATAD2BQ9ULI0 1458 aa6.98□□□□□ -1.29
FOXN3-210ENST00000555658 TXLNAP40222 546 aa6.97□□□□□ -1.29
FOXN3-210ENST00000555658 FCHSD1Q86WN1 690 aa6.97□□□□□ -1.29
FOXN3-210ENST00000555658 TNS4Q8IZW8 715 aa6.97□□□□□ -1.29
FOXN3-210ENST00000555658 ZNF295-AS1Q8N0V1 137 aa6.97□□□□□ -1.29
FOXN3-210ENST00000555658 TPCN2Q8NHX9 752 aa6.97□□□□□ -1.29
FOXN3-210ENST00000555658 RHPN1Q8TCX5 695 aa6.97□□□□□ -1.29
FOXN3-210ENST00000555658 SMARCA2P51531 1590 aa6.96□□□□□ -1.29
FOXN3-210ENST00000555658 ANKIB1Q9P2G1 1089 aa6.96□□□□□ -1.3
FOXN3-210ENST00000555658 ELOA3CA0A087WX78 387 aaPredicted RBP6.95□□□□□ -1.3
FOXN3-210ENST00000555658 ELOA3DA6NLF2 546 aaPredicted RBP6.95□□□□□ -1.3
FOXN3-210ENST00000555658 C1QTNF9BB2RNN3 333 aa6.95□□□□□ -1.3
FOXN3-210ENST00000555658 EFSO43281 561 aa6.95□□□□□ -1.3
FOXN3-210ENST00000555658 FURINP09958 794 aa6.95□□□□□ -1.3
FOXN3-210ENST00000555658 HOXB4P17483 251 aaPredicted RBP6.95□□□□□ -1.3
FOXN3-210ENST00000555658 PSMA6P60900 246 aaKnown RBP6.95□□□□□ -1.3
FOXN3-210ENST00000555658 ELOA3BQ3SY89 546 aa6.95□□□□□ -1.3
FOXN3-210ENST00000555658 TBCELQ5QJ74 424 aa6.95□□□□□ -1.3
FOXN3-210ENST00000555658 CCDC102BQ68D86 513 aa6.95□□□□□ -1.3
FOXN3-210ENST00000555658 SYT9Q86SS6 491 aa6.95□□□□□ -1.3
FOXN3-210ENST00000555658 ELOA3Q8NG57 546 aa6.95□□□□□ -1.3
FOXN3-210ENST00000555658 POM121Q96HA1 1249 aa6.95□□□□□ -1.3
FOXN3-210ENST00000555658 NCAPD3P42695 1498 aa6.95□□□□□ -1.3
FOXN3-210ENST00000555658 USP17L3A6NCW0 530 aa6.94□□□□□ -1.3
FOXN3-210ENST00000555658 USP17L4A6NCW7 530 aa6.94□□□□□ -1.3
FOXN3-210ENST00000555658 PRRT3Q5FWE3 981 aa6.94□□□□□ -1.3
FOXN3-210ENST00000555658 USP17L2Q6R6M4 530 aa6.94□□□□□ -1.3
FOXN3-210ENST00000555658 USP17L1Q7RTZ2 530 aa6.94□□□□□ -1.3
FOXN3-210ENST00000555658 PLEKHM2Q8IWE5 1019 aa6.94□□□□□ -1.3
FOXN3-210ENST00000555658 ZDHHC1Q8WTX9 485 aa6.94□□□□□ -1.3
FOXN3-210ENST00000555658 PLVAPQ9BX97 442 aa6.94□□□□□ -1.3
FOXN3-210ENST00000555658 STRN4Q9NRL3 753 aa6.94□□□□□ -1.3
FOXN3-210ENST00000555658 KLF15Q9UIH9 416 aa6.94□□□□□ -1.3
FOXN3-210ENST00000555658 BAZ1BQ9UIG0 1483 aaKnown RBP6.93□□□□□ -1.3
FOXN3-210ENST00000555658 PALM3A6NDB9 673 aaPredicted RBP6.93□□□□□ -1.3
FOXN3-210ENST00000555658 EML1O00423 815 aa6.93□□□□□ -1.3
FOXN3-210ENST00000555658 SPATA31C1P0DKV0 1188 aa6.93□□□□□ -1.3
FOXN3-210ENST00000555658 HDGFL1Q5TGJ6 251 aa6.93□□□□□ -1.3
FOXN3-210ENST00000555658 CD163Q86VB7 1156 aa6.93□□□□□ -1.3
FOXN3-210ENST00000555658 CEP63Q96MT8 703 aa6.93□□□□□ -1.3
FOXN3-210ENST00000555658 PEG3Q9GZU2 1588 aa6.93□□□□□ -1.3
FOXN3-210ENST00000555658 WIZO95785 1651 aa6.93□□□□□ -1.3
FOXN3-210ENST00000555658 ATP9BO43861 1147 aa6.92□□□□□ -1.3
FOXN3-210ENST00000555658 SIN3BO75182 1162 aa6.92□□□□□ -1.3
FOXN3-210ENST00000555658 APBA3O96018 575 aa6.92□□□□□ -1.3
FOXN3-210ENST00000555658 EPHA4P54764 986 aa6.92□□□□□ -1.3
FOXN3-210ENST00000555658 C1orf53Q5VUE5 145 aa6.92□□□□□ -1.3
FOXN3-210ENST00000555658 LARGE2Q8N3Y3 721 aa6.92□□□□□ -1.3
FOXN3-210ENST00000555658 MKRN1Q9UHC7 482 aaKnown RBP6.92□□□□□ -1.3
FOXN3-210ENST00000555658 PRKCSHP14314 528 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-210ENST00000555658 HIF1AQ16665 826 aa6.91□□□□□ -1.3
FOXN3-210ENST00000555658 OGFOD1Q8N543 542 aa6.91□□□□□ -1.3
FOXN3-210ENST00000555658 HCN4Q9Y3Q4 1203 aa6.91□□□□□ -1.3
FOXN3-210ENST00000555658 TOP2AP11388 1531 aaKnown RBP6.91□□□□□ -1.3
FOXN3-210ENST00000555658 POM121CA8CG34 1229 aa6.9□□□□□ -1.3
FOXN3-210ENST00000555658 SFI1A8K8P3 1242 aa6.9□□□□□ -1.3
FOXN3-210ENST00000555658 M0R2N6 131 aa6.9□□□□□ -1.3
FOXN3-210ENST00000555658 PPP1R12BO60237 982 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-210ENST00000555658 CHRNA4P43681 627 aa6.9□□□□□ -1.3
FOXN3-210ENST00000555658 GATA4P43694 442 aa6.9□□□□□ -1.3
FOXN3-210ENST00000555658 SPEM2Q0P670 501 aa6.9□□□□□ -1.3
FOXN3-210ENST00000555658 SFSWAPQ12872 951 aaKnown RBP6.9□□□□□ -1.3
FOXN3-210ENST00000555658 TRIM11Q96F44 468 aa6.9□□□□□ -1.3
FOXN3-210ENST00000555658 ZNF594Q96JF6 807 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-210ENST00000555658 PHACTR1Q9C0D0 580 aa6.9□□□□□ -1.3
FOXN3-210ENST00000555658 TSPAN10Q9H1Z9 355 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-210ENST00000555658 BRD7Q9NPI1 651 aa6.9□□□□□ -1.3
FOXN3-210ENST00000555658 ADARB2-AS1A8MUL3 147 aa6.89□□□□□ -1.31
FOXN3-210ENST00000555658 M0R082 166 aa6.89□□□□□ -1.31
FOXN3-210ENST00000555658 HIRAP54198 1017 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-210ENST00000555658 ZNF417Q8TAU3 575 aa6.89□□□□□ -1.31
FOXN3-210ENST00000555658 ZNF587Q96SQ5 575 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-210ENST00000555658 HCN2Q9UL51 889 aa6.89□□□□□ -1.31
FOXN3-210ENST00000555658 KCNH4Q9UQ05 1017 aa6.89□□□□□ -1.31
FOXN3-210ENST00000555658 CC2D2AQ9P2K1 1620 aa6.89□□□□□ -1.31
FOXN3-210ENST00000555658 ZBTB7BO15156 539 aaPredicted RBP6.88□□□□□ -1.31
FOXN3-210ENST00000555658 ADH7P40394 386 aa6.88□□□□□ -1.31
FOXN3-210ENST00000555658 CLDN10P78369 228 aa6.88□□□□□ -1.31
FOXN3-210ENST00000555658 TRIM28Q13263 835 aaKnown RBP6.88□□□□□ -1.31
FOXN3-210ENST00000555658 NACC1Q96RE7 527 aa6.88□□□□□ -1.31
FOXN3-210ENST00000555658 HMGXB3Q12766 1538 aa6.87□□□□□ -1.31
FOXN3-210ENST00000555658 RASA1P20936 1047 aa6.87□□□□□ -1.31
FOXN3-210ENST00000555658 TBC1D8BQ0IIM8 1120 aa6.87□□□□□ -1.31
FOXN3-210ENST00000555658 DOC2BQ14184 412 aa6.87□□□□□ -1.31
FOXN3-210ENST00000555658 SH3PXD2AQ5TCZ1 1133 aa6.87□□□□□ -1.31
FOXN3-210ENST00000555658 TSEN2Q8NCE0 465 aaKnown RBP6.87□□□□□ -1.31
FOXN3-210ENST00000555658 TNFRSF25Q93038 417 aa6.87□□□□□ -1.31
FOXN3-210ENST00000555658 HSH2DQ96JZ2 352 aa6.87□□□□□ -1.31
FOXN3-210ENST00000555658 SLC30A3Q99726 388 aa6.87□□□□□ -1.31
FOXN3-210ENST00000555658 KIAA1024Q9UPX6 916 aa6.87□□□□□ -1.31
FOXN3-210ENST00000555658 CCDC88BA6NC98 1476 aa6.86□□□□□ -1.31
FOXN3-210ENST00000555658 XP32Q5T750 250 aa6.86□□□□□ -1.31
FOXN3-210ENST00000555658 LARP1Q6PKG0 1096 aaKnown RBP6.86□□□□□ -1.31
FOXN3-210ENST00000555658 RAB44Q7Z6P3 723 aaPredicted RBP6.86□□□□□ -1.31
FOXN3-210ENST00000555658 SIX5Q8N196 739 aa6.86□□□□□ -1.31
FOXN3-210ENST00000555658 GAS2L2Q8NHY3 880 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms