RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 NRXN2Q9P2S2 1712 aa13.12□□□□□ -0.31
HNRNPC-219ENST00000555309 BRCA1P38398 1863 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-219ENST00000555309 CHL1O00533 1208 aa13.11□□□□□ -0.31
HNRNPC-219ENST00000555309 PDIA6Q15084 440 aa13.11□□□□□ -0.31
HNRNPC-219ENST00000555309 ARHGAP27Q6ZUM4 889 aa13.11□□□□□ -0.31
HNRNPC-219ENST00000555309 NPM2Q86SE8 214 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-219ENST00000555309 PIM2Q9P1W9 311 aa13.11□□□□□ -0.31
HNRNPC-219ENST00000555309 SETDB2Q96T68 719 aa13.1□□□□□ -0.31
HNRNPC-219ENST00000555309 LMOD3Q0VAK6 560 aa13.1□□□□□ -0.31
HNRNPC-219ENST00000555309 DALRD3Q5D0E6 543 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-219ENST00000555309 LRP10Q7Z4F1 713 aa13.1□□□□□ -0.31
HNRNPC-219ENST00000555309 C2CD5Q86YS7 1000 aa13.1□□□□□ -0.31
HNRNPC-219ENST00000555309 ZNF526Q8TF50 670 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-219ENST00000555309 ANKRD31Q8N7Z5 1873 aa13.09□□□□□ -0.31
HNRNPC-219ENST00000555309 LAMB4A4D0S4 1761 aa13.09□□□□□ -0.31
HNRNPC-219ENST00000555309 BCORQ6W2J9 1755 aa13.09□□□□□ -0.31
HNRNPC-219ENST00000555309 ZBTB3Q9H5J0 574 aa13.09□□□□□ -0.31
HNRNPC-219ENST00000555309 NIP7Q9Y221 180 aaKnown RBP eCLIP13.08□□□□□ -0.32
HNRNPC-219ENST00000555309 ATP10DQ9P241 1426 aa13.08□□□□□ -0.32
HNRNPC-219ENST00000555309 PRELPP51888 382 aa13.08□□□□□ -0.32
HNRNPC-219ENST00000555309 ZNF428Q96B54 188 aa13.08□□□□□ -0.32
HNRNPC-219ENST00000555309 ZNF219Q9P2Y4 722 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-219ENST00000555309 CLEC4GQ6UXB4 293 aa13.07□□□□□ -0.32
HNRNPC-219ENST00000555309 NBPF5PQ86XG9 351 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-219ENST00000555309 CNBD1Q8NA66 436 aa13.07□□□□□ -0.32
HNRNPC-219ENST00000555309 BRIP1Q9BX63 1249 aa13.07□□□□□ -0.32
HNRNPC-219ENST00000555309 MBIPQ9NS73 344 aa13.07□□□□□ -0.32
HNRNPC-219ENST00000555309 ADCY9O60503 1353 aa13.06□□□□□ -0.32
HNRNPC-219ENST00000555309 H0YIN7 160 aa13.06□□□□□ -0.32
HNRNPC-219ENST00000555309 ELL2O00472 640 aaPredicted RBP13.06□□□□□ -0.32
HNRNPC-219ENST00000555309 NEFLP07196 543 aa13.06□□□□□ -0.32
HNRNPC-219ENST00000555309 GPTP24298 496 aa13.06□□□□□ -0.32
HNRNPC-219ENST00000555309 RASSF7Q02833 373 aa13.06□□□□□ -0.32
HNRNPC-219ENST00000555309 ZNF622Q969S3 477 aaKnown RBP eCLIP13.06□□□□□ -0.321e-21■□□□□ 9
HNRNPC-219ENST00000555309 BABAM1Q9NWV8 329 aa13.06□□□□□ -0.32
HNRNPC-219ENST00000555309 MAP3K15Q6ZN16 1313 aa13.06□□□□□ -0.32
HNRNPC-219ENST00000555309 ZNF853P0CG23 659 aa13.05□□□□□ -0.32
HNRNPC-219ENST00000555309 AIMP1Q12904 312 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-219ENST00000555309 NUTM1Q86Y26 1132 aa13.05□□□□□ -0.32
HNRNPC-219ENST00000555309 CFAP44Q96MT7 982 aa13.05□□□□□ -0.32
HNRNPC-219ENST00000555309 SALL2Q9Y467 1007 aaPredicted RBP13.05□□□□□ -0.32
HNRNPC-219ENST00000555309 COL11A2P13942 1736 aaPredicted RBP13.05□□□□□ -0.32
HNRNPC-219ENST00000555309 UBN2Q6ZU65 1347 aa13.05□□□□□ -0.32
HNRNPC-219ENST00000555309 NPHP1O15259 732 aa13.05□□□□□ -0.32
HNRNPC-219ENST00000555309 ERICH6BQ5W0A0 696 aa13.05□□□□□ -0.32
HNRNPC-219ENST00000555309 COPS6Q7L5N1 327 aa13.05□□□□□ -0.32
HNRNPC-219ENST00000555309 TTLL6Q8N841 843 aa13.05□□□□□ -0.32
HNRNPC-219ENST00000555309 ZNF652Q9Y2D9 606 aa13.05□□□□□ -0.32
HNRNPC-219ENST00000555309 ARFGEF1Q9Y6D6 1849 aa13.04□□□□□ -0.32
HNRNPC-219ENST00000555309 SUSD4Q5VX71 490 aa13.04□□□□□ -0.32
HNRNPC-219ENST00000555309 C9orf131Q5VYM1 1079 aa13.04□□□□□ -0.32
HNRNPC-219ENST00000555309 KIF6Q6ZMV9 814 aa13.04□□□□□ -0.32
HNRNPC-219ENST00000555309 SLC51AQ86UW1 340 aa13.04□□□□□ -0.32
HNRNPC-219ENST00000555309 XAGE3Q8WTP9 111 aa13.04□□□□□ -0.32
HNRNPC-219ENST00000555309 CHPF2Q9P2E5 772 aa13.04□□□□□ -0.32
HNRNPC-219ENST00000555309 NUP98P52948 1817 aa13.03□□□□□ -0.32
HNRNPC-219ENST00000555309 ERVV-1B6SEH8 477 aa13.03□□□□□ -0.32
HNRNPC-219ENST00000555309 C21orf2O43822 256 aa13.03□□□□□ -0.32
HNRNPC-219ENST00000555309 SRGNP10124 158 aa13.03□□□□□ -0.32
HNRNPC-219ENST00000555309 PDE6BP35913 854 aa13.03□□□□□ -0.32
HNRNPC-219ENST00000555309 DUSP27Q5VZP5 1158 aa13.03□□□□□ -0.32
HNRNPC-219ENST00000555309 OLFM4Q6UX06 510 aa13.03□□□□□ -0.32
HNRNPC-219ENST00000555309 C8orf58Q8NAV2 365 aa13.03□□□□□ -0.32
HNRNPC-219ENST00000555309 ABCC12Q96J65 1359 aa13.03□□□□□ -0.32
HNRNPC-219ENST00000555309 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.32
HNRNPC-219ENST00000555309 ST5P78524 1137 aa13.02□□□□□ -0.32
HNRNPC-219ENST00000555309 ERFEQ4G0M1 354 aa13.02□□□□□ -0.32
HNRNPC-219ENST00000555309 HDGFL1Q5TGJ6 251 aa13.02□□□□□ -0.32
HNRNPC-219ENST00000555309 TPTE2Q6XPS3 522 aa13.02□□□□□ -0.32
HNRNPC-219ENST00000555309 ZNF34Q8IZ26 560 aa13.02□□□□□ -0.32
HNRNPC-219ENST00000555309 TSR2Q969E8 191 aaKnown RBP13.02□□□□□ -0.32
HNRNPC-219ENST00000555309 NFKBIEO00221 500 aa13.02□□□□□ -0.33
HNRNPC-219ENST00000555309 GIGYF2Q6Y7W6 1299 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-219ENST00000555309 C3orf67Q6ZVT6 689 aa13.02□□□□□ -0.33
HNRNPC-219ENST00000555309 SYNE4Q8N205 404 aa13.02□□□□□ -0.33
HNRNPC-219ENST00000555309 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
HNRNPC-219ENST00000555309 ERBB4Q15303 1308 aa13.02□□□□□ -0.33
HNRNPC-219ENST00000555309 SLX4Q8IY92 1834 aa13.01□□□□□ -0.33
HNRNPC-219ENST00000555309 GPBP1L1Q9HC44 474 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-219ENST00000555309 DDX21Q9NR30 783 aaKnown RBP eCLIP13.01□□□□□ -0.33
HNRNPC-219ENST00000555309 IFT57Q9NWB7 429 aa13.01□□□□□ -0.33
HNRNPC-219ENST00000555309 RNF181Q9P0P0 153 aa13.01□□□□□ -0.33
HNRNPC-219ENST00000555309 TNRC6CQ9HCJ0 1690 aaKnown RBP13□□□□□ -0.33
HNRNPC-219ENST00000555309 PRPF40BQ6NWY9 871 aaKnown RBP13□□□□□ -0.33
HNRNPC-219ENST00000555309 WWC1Q8IX03 1113 aa13□□□□□ -0.33
HNRNPC-219ENST00000555309 KLRG2A4D1S0 409 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-219ENST00000555309 TCERG1O14776 1098 aaKnown RBP12.99□□□□□ -0.33
HNRNPC-219ENST00000555309 RGL2O15211 777 aa12.99□□□□□ -0.33
HNRNPC-219ENST00000555309 NTSR2O95665 410 aa12.99□□□□□ -0.33
HNRNPC-219ENST00000555309 GTF2E1P29083 439 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-219ENST00000555309 GNAI1P63096 354 aa12.99□□□□□ -0.33
HNRNPC-219ENST00000555309 MASTLQ96GX5 879 aa12.99□□□□□ -0.33
HNRNPC-219ENST00000555309 PHAXQ9H814 394 aaKnown RBP12.99□□□□□ -0.33
HNRNPC-219ENST00000555309 SBF1O95248 1867 aa12.99□□□□□ -0.33
HNRNPC-219ENST00000555309 CACNA1SQ13698 1873 aa12.99□□□□□ -0.33
HNRNPC-219ENST00000555309 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
HNRNPC-219ENST00000555309 C1QTNF8P60827 252 aa12.99□□□□□ -0.33
HNRNPC-219ENST00000555309 STYK1Q6J9G0 422 aa12.99□□□□□ -0.33
HNRNPC-219ENST00000555309 NMRK2Q9NPI5 230 aa12.99□□□□□ -0.33
HNRNPC-219ENST00000555309 C7orf43Q8WVR3 580 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms