RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 GLRX3O76003 335 aaKnown RBP14.18□□□□□ -0.14
XRCC3-208ENST00000554811 ZSCAN22P10073 491 aaPredicted RBP14.18□□□□□ -0.14
XRCC3-208ENST00000554811 ZNF592Q92610 1267 aa14.18□□□□□ -0.14
XRCC3-208ENST00000554811 ZKSCAN5Q9Y2L8 839 aa14.18□□□□□ -0.14
XRCC3-208ENST00000554811 IBTKQ9P2D0 1353 aaPredicted RBP14.18□□□□□ -0.14
XRCC3-208ENST00000554811 CYP2E1P05181 493 aaPredicted RBP14.18□□□□□ -0.14
XRCC3-208ENST00000554811 SBNO1A3KN83 1393 aa14.18□□□□□ -0.14
XRCC3-208ENST00000554811 SGSM2O43147 1006 aa14.18□□□□□ -0.14
XRCC3-208ENST00000554811 GUCY1B3Q02153 619 aa14.18□□□□□ -0.14
XRCC3-208ENST00000554811 NEXNQ0ZGT2 675 aa14.18□□□□□ -0.14
XRCC3-208ENST00000554811 PLEKHO1Q53GL0 409 aaPredicted RBP14.18□□□□□ -0.14
XRCC3-208ENST00000554811 ECHDC1Q9NTX5 307 aa14.18□□□□□ -0.14
XRCC3-208ENST00000554811 ATP6V1DQ9Y5K8 247 aa14.18□□□□□ -0.14
XRCC3-208ENST00000554811 RGS12O14924 1447 aa14.17□□□□□ -0.14
XRCC3-208ENST00000554811 HSP90AB4PQ58FF6 505 aa14.17□□□□□ -0.14
XRCC3-208ENST00000554811 RUFY3Q7L099 469 aa14.17□□□□□ -0.14
XRCC3-208ENST00000554811 MYD88Q99836 296 aa14.17□□□□□ -0.14
XRCC3-208ENST00000554811 RBM8AQ9Y5S9 174 aaKnown RBP14.17□□□□□ -0.14
XRCC3-208ENST00000554811 OFD1O75665 1012 aa14.17□□□□□ -0.14
XRCC3-208ENST00000554811 THEMISQ8N1K5 641 aaPredicted RBP14.17□□□□□ -0.14
XRCC3-208ENST00000554811 CLTCQ00610 1675 aaKnown RBP14.17□□□□□ -0.14
XRCC3-208ENST00000554811 RAB11FIP4Q86YS3 637 aa14.17□□□□□ -0.14
XRCC3-208ENST00000554811 TLR7Q9NYK1 1049 aaKnown RBP14.17□□□□□ -0.14
XRCC3-208ENST00000554811 CRB1P82279 1406 aa14.16□□□□□ -0.14
XRCC3-208ENST00000554811 KIF20BQ96Q89 1820 aa14.16□□□□□ -0.14
XRCC3-208ENST00000554811 NMIQ13287 307 aaPredicted RBP14.16□□□□□ -0.14
XRCC3-208ENST00000554811 FAM184AQ8NB25 1140 aa14.16□□□□□ -0.14
XRCC3-208ENST00000554811 HSPA4P34932 840 aa14.16□□□□□ -0.14
XRCC3-208ENST00000554811 BLOC1S2Q6QNY1 142 aa14.16□□□□□ -0.14
XRCC3-208ENST00000554811 CCDC129Q6ZRS4 1044 aa14.16□□□□□ -0.14
XRCC3-208ENST00000554811 CHGBP05060 677 aa14.16□□□□□ -0.14
XRCC3-208ENST00000554811 CCDC183Q5T5S1 534 aa14.16□□□□□ -0.14
XRCC3-208ENST00000554811 DDX17Q92841 729 aaKnown RBP14.16□□□□□ -0.14
XRCC3-208ENST00000554811 ORAI2Q96SN7 254 aa14.16□□□□□ -0.14
XRCC3-208ENST00000554811 TTC21AQ8NDW8 1320 aa14.15□□□□□ -0.14
XRCC3-208ENST00000554811 OSBPL3Q9H4L5 887 aa14.15□□□□□ -0.14
XRCC3-208ENST00000554811 BICC1Q9H694 974 aaKnown RBP14.15□□□□□ -0.14
XRCC3-208ENST00000554811 DBF4Q9UBU7 674 aaPredicted RBP14.15□□□□□ -0.14
XRCC3-208ENST00000554811 IGSF1Q8N6C5 1336 aa14.15□□□□□ -0.14
XRCC3-208ENST00000554811 F13A1P00488 732 aa14.15□□□□□ -0.14
XRCC3-208ENST00000554811 EIF4A1P60842 406 aaKnown RBP14.15□□□□□ -0.14
XRCC3-208ENST00000554811 SSH3Q8TE77 659 aa14.15□□□□□ -0.14
XRCC3-208ENST00000554811 RAPGEF4Q8WZA2 1011 aa14.15□□□□□ -0.14
XRCC3-208ENST00000554811 NOL7Q9UMY1 257 aaKnown RBP14.15□□□□□ -0.14
XRCC3-208ENST00000554811 DDX46Q7L014 1031 aaKnown RBP14.14□□□□□ -0.15
XRCC3-208ENST00000554811 CABLES1Q8TDN4 633 aa14.14□□□□□ -0.15
XRCC3-208ENST00000554811 RAD50Q92878 1312 aa14.14□□□□□ -0.15
XRCC3-208ENST00000554811 DDX58O95786 925 aaKnown RBP14.14□□□□□ -0.15
XRCC3-208ENST00000554811 CHRNA2Q15822 529 aa14.14□□□□□ -0.15
XRCC3-208ENST00000554811 CHST3Q7LGC8 479 aa14.14□□□□□ -0.15
XRCC3-208ENST00000554811 ANAPC15P60006 121 aa14.14□□□□□ -0.15
XRCC3-208ENST00000554811 UBE3BQ7Z3V4 1068 aa14.14□□□□□ -0.15
XRCC3-208ENST00000554811 TTC5Q8N0Z6 440 aa14.14□□□□□ -0.15
XRCC3-208ENST00000554811 STK11IPQ8N1F8 1099 aa14.14□□□□□ -0.15
XRCC3-208ENST00000554811 KIF24Q5T7B8 1368 aa14.14□□□□□ -0.15
XRCC3-208ENST00000554811 TRIM5Q9C035 493 aa14.13□□□□□ -0.15
XRCC3-208ENST00000554811 PI4K2BQ8TCG2 481 aa14.13□□□□□ -0.15
XRCC3-208ENST00000554811 SUCLG2Q96I99 432 aa14.13□□□□□ -0.15
XRCC3-208ENST00000554811 CCT2P78371 535 aaKnown RBP14.13□□□□□ -0.15
XRCC3-208ENST00000554811 CHAF1AQ13111 956 aaPredicted RBP14.13□□□□□ -0.15
XRCC3-208ENST00000554811 GORABQ5T7V8 394 aa14.13□□□□□ -0.15
XRCC3-208ENST00000554811 PPP6R1Q9UPN7 881 aa14.13□□□□□ -0.15
XRCC3-208ENST00000554811 ARHGEF10O15013 1369 aa14.13□□□□□ -0.15
XRCC3-208ENST00000554811 DLG5Q8TDM6 1919 aa14.13□□□□□ -0.15
XRCC3-208ENST00000554811 A0A087WWV3 80 aa14.12□□□□□ -0.15
XRCC3-208ENST00000554811 ME3Q16798 604 aa14.12□□□□□ -0.15
XRCC3-208ENST00000554811 CSPP1Q1MSJ5 1256 aa14.12□□□□□ -0.15
XRCC3-208ENST00000554811 SLFNL1Q499Z3 407 aa14.12□□□□□ -0.15
XRCC3-208ENST00000554811 ANKRD24Q8TF21 1146 aa14.12□□□□□ -0.15
XRCC3-208ENST00000554811 RIMS1Q86UR5 1692 aaKnown RBP14.12□□□□□ -0.15
XRCC3-208ENST00000554811 KAT6BQ8WYB5 2073 aa14.12□□□□□ -0.15
XRCC3-208ENST00000554811 COL9A3Q14050 684 aaPredicted RBP14.12□□□□□ -0.15
XRCC3-208ENST00000554811 BEND3Q5T5X7 828 aa14.12□□□□□ -0.15
XRCC3-208ENST00000554811 SPATA32Q96LK8 384 aa14.12□□□□□ -0.15
XRCC3-208ENST00000554811 FMNL2Q96PY5 1086 aa14.12□□□□□ -0.15
XRCC3-208ENST00000554811 TNMDQ9H2S6 317 aa14.12□□□□□ -0.15
XRCC3-208ENST00000554811 KRT85P78386 507 aa14.12□□□□□ -0.15
XRCC3-208ENST00000554811 RNF20Q5VTR2 975 aa14.12□□□□□ -0.15
XRCC3-208ENST00000554811 CDC37L1Q7L3B6 337 aa14.12□□□□□ -0.15
XRCC3-208ENST00000554811 COPS6Q7L5N1 327 aa14.12□□□□□ -0.15
XRCC3-208ENST00000554811 XAGE3Q8WTP9 111 aa14.12□□□□□ -0.15
XRCC3-208ENST00000554811 EAF2Q96CJ1 260 aaPredicted RBP14.12□□□□□ -0.15
XRCC3-208ENST00000554811 LSG1Q9H089 658 aaKnown RBP14.12□□□□□ -0.15
XRCC3-208ENST00000554811 UBE2HP62256 183 aa14.11□□□□□ -0.15
XRCC3-208ENST00000554811 CREB3L3Q68CJ9 461 aa14.11□□□□□ -0.15
XRCC3-208ENST00000554811 LUZP1Q86V48 1076 aa14.11□□□□□ -0.15
XRCC3-208ENST00000554811 KLHL34Q8N239 644 aa14.11□□□□□ -0.15
XRCC3-208ENST00000554811 ERCC4Q92889 916 aaPredicted RBP14.11□□□□□ -0.15
XRCC3-208ENST00000554811 INTS4Q96HW7 963 aaKnown RBP14.11□□□□□ -0.15
XRCC3-208ENST00000554811 SEC62Q99442 399 aaKnown RBP14.11□□□□□ -0.15
XRCC3-208ENST00000554811 KNDC1Q76NI1 1749 aa14.11□□□□□ -0.15
XRCC3-208ENST00000554811 A0A0D9SFI3 127 aa14.11□□□□□ -0.15
XRCC3-208ENST00000554811 CUL4AQ13619 759 aa14.11□□□□□ -0.15
XRCC3-208ENST00000554811 ZRSR1Q15695 479 aaKnown RBP14.11□□□□□ -0.15
XRCC3-208ENST00000554811 NFATC2IPQ8NCF5 419 aa14.11□□□□□ -0.15
XRCC3-208ENST00000554811 CEP170BQ9Y4F5 1589 aaPredicted RBP14.11□□□□□ -0.15
XRCC3-208ENST00000554811 NPHP1O15259 732 aa14.11□□□□□ -0.15
XRCC3-208ENST00000554811 HSP90AB3PQ58FF7 597 aa14.11□□□□□ -0.15
XRCC3-208ENST00000554811 NUP62CLQ9H1M0 184 aa14.11□□□□□ -0.15
XRCC3-208ENST00000554811 TAF6LQ9Y6J9 622 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms