RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 CHPF2Q9P2E5 772 aa16.73■□□□□ 0.27
MTHFD1-209ENST00000554768 SETDB2Q96T68 719 aa16.72■□□□□ 0.27
MTHFD1-209ENST00000554768 DBF4Q9UBU7 674 aaPredicted RBP16.72■□□□□ 0.27
MTHFD1-209ENST00000554768 ZNF652Q9Y2D9 606 aa16.72■□□□□ 0.27
MTHFD1-209ENST00000554768 LAMB4A4D0S4 1761 aa16.72■□□□□ 0.27
MTHFD1-209ENST00000554768 MAP3K15Q6ZN16 1313 aa16.71■□□□□ 0.27
MTHFD1-209ENST00000554768 FANCIQ9NVI1 1328 aa16.71■□□□□ 0.27
MTHFD1-209ENST00000554768 TGFB2P61812 414 aa16.71■□□□□ 0.27
MTHFD1-209ENST00000554768 KIF6Q6ZMV9 814 aa16.71■□□□□ 0.27
MTHFD1-209ENST00000554768 COPS6Q7L5N1 327 aa16.71■□□□□ 0.27
MTHFD1-209ENST00000554768 C10orf71Q711Q0 1435 aa16.7■□□□□ 0.26
MTHFD1-209ENST00000554768 GOLGA2Q08379 1002 aa16.7■□□□□ 0.26
MTHFD1-209ENST00000554768 XAGE3Q8WTP9 111 aa16.7■□□□□ 0.26
MTHFD1-209ENST00000554768 ZBTB3Q9H5J0 574 aa16.7■□□□□ 0.26
MTHFD1-209ENST00000554768 CARMIL3Q8ND23 1372 aa16.69■□□□□ 0.26
MTHFD1-209ENST00000554768 DCAF8L1A6NGE4 600 aa16.69■□□□□ 0.26
MTHFD1-209ENST00000554768 CHMP4AQ9BY43 222 aa16.69■□□□□ 0.26
MTHFD1-209ENST00000554768 MYH16Q9H6N6 1097 aa16.69■□□□□ 0.26
MTHFD1-209ENST00000554768 HYPKQ9NX55 129 aa16.69■□□□□ 0.26
MTHFD1-209ENST00000554768 NIP7Q9Y221 180 aaKnown RBP eCLIP16.69■□□□□ 0.26
MTHFD1-209ENST00000554768 A0A0G2JLW4 131 aa16.68■□□□□ 0.26
MTHFD1-209ENST00000554768 AIMP1Q12904 312 aaKnown RBP16.68■□□□□ 0.26
MTHFD1-209ENST00000554768 TWISTNBQ3B726 338 aaPredicted RBP16.68■□□□□ 0.26
MTHFD1-209ENST00000554768 PRR5LQ6MZQ0 368 aa16.68■□□□□ 0.26
MTHFD1-209ENST00000554768 GIGYF2Q6Y7W6 1299 aaKnown RBP16.68■□□□□ 0.26
MTHFD1-209ENST00000554768 SCN7AQ01118 1682 aa16.67■□□□□ 0.26
MTHFD1-209ENST00000554768 DPEP1P16444 411 aa16.67■□□□□ 0.26
MTHFD1-209ENST00000554768 KCNA3P22001 575 aa16.67■□□□□ 0.26
MTHFD1-209ENST00000554768 EXOSC9Q06265 439 aaKnown RBP16.67■□□□□ 0.26
MTHFD1-209ENST00000554768 CCDC30Q5VVM6 783 aa16.67■□□□□ 0.26
MTHFD1-209ENST00000554768 VAMP4O75379 141 aa16.66■□□□□ 0.26
MTHFD1-209ENST00000554768 GPR162Q16538 588 aa16.66■□□□□ 0.26
MTHFD1-209ENST00000554768 ZNF34Q8IZ26 560 aa16.66■□□□□ 0.26
MTHFD1-209ENST00000554768 PXDNLA1KZ92 1463 aa16.66■□□□□ 0.26
MTHFD1-209ENST00000554768 YBX3P16989 372 aaKnown RBP eCLIP16.65■□□□□ 0.263e-7■□□□□ 10.1
MTHFD1-209ENST00000554768 TPTE2Q6XPS3 522 aa16.65■□□□□ 0.26
MTHFD1-209ENST00000554768 ANKRD13DQ6ZTN6 518 aa16.65■□□□□ 0.26
MTHFD1-209ENST00000554768 NBPF5PQ86XG9 351 aaPredicted RBP16.65■□□□□ 0.26
MTHFD1-209ENST00000554768 CCDC24Q8N4L8 307 aa16.65■□□□□ 0.26
MTHFD1-209ENST00000554768 CNBD1Q8NA66 436 aa16.65■□□□□ 0.26
MTHFD1-209ENST00000554768 BRIP1Q9BX63 1249 aa16.65■□□□□ 0.26
MTHFD1-209ENST00000554768 PHAXQ9H814 394 aaKnown RBP16.65■□□□□ 0.26
MTHFD1-209ENST00000554768 ATP10DQ9P241 1426 aa16.64■□□□□ 0.25
MTHFD1-209ENST00000554768 GPTP24298 496 aa16.64■□□□□ 0.25
MTHFD1-209ENST00000554768 CHRNA5P30532 468 aa16.64■□□□□ 0.25
MTHFD1-209ENST00000554768 SLFN5Q08AF3 891 aa16.64■□□□□ 0.25
MTHFD1-209ENST00000554768 PELP1Q8IZL8 1130 aaKnown RBP16.64■□□□□ 0.25
MTHFD1-209ENST00000554768 PLBD2Q8NHP8 589 aa16.64■□□□□ 0.25
MTHFD1-209ENST00000554768 E9PSI1 815 aa16.63■□□□□ 0.25
MTHFD1-209ENST00000554768 TCERG1O14776 1098 aaKnown RBP16.63■□□□□ 0.25
MTHFD1-209ENST00000554768 TCIRG1Q13488 830 aa16.63■□□□□ 0.25
MTHFD1-209ENST00000554768 CDCA7LQ96GN5 454 aa16.63■□□□□ 0.25
MTHFD1-209ENST00000554768 WWC3Q9ULE0 1092 aa16.63■□□□□ 0.25
MTHFD1-209ENST00000554768 BCORQ6W2J9 1755 aa16.63■□□□□ 0.25
MTHFD1-209ENST00000554768 UBN2Q6ZU65 1347 aa16.63■□□□□ 0.25
MTHFD1-209ENST00000554768 NRXN2Q9P2S2 1712 aa16.62■□□□□ 0.25
MTHFD1-209ENST00000554768 FAM177BA6PVY3 158 aa16.62■□□□□ 0.25
MTHFD1-209ENST00000554768 SLC4A2P04920 1241 aa16.62■□□□□ 0.25
MTHFD1-209ENST00000554768 PDE6BP35913 854 aa16.62■□□□□ 0.25
MTHFD1-209ENST00000554768 HSP90AB3PQ58FF7 597 aa16.62■□□□□ 0.25
MTHFD1-209ENST00000554768 SUSD4Q5VX71 490 aa16.62■□□□□ 0.25
MTHFD1-209ENST00000554768 TRMT2AQ8IZ69 625 aaKnown RBP16.62■□□□□ 0.25
MTHFD1-209ENST00000554768 STK31Q9BXU1 1019 aa16.62■□□□□ 0.25
MTHFD1-209ENST00000554768 PIM2Q9P1W9 311 aa16.62■□□□□ 0.25
MTHFD1-209ENST00000554768 H0YIN7 160 aa16.61■□□□□ 0.25
MTHFD1-209ENST00000554768 GRIN3BO60391 1043 aa16.61■□□□□ 0.25
MTHFD1-209ENST00000554768 ST5P78524 1137 aa16.61■□□□□ 0.25
MTHFD1-209ENST00000554768 PARP10Q53GL7 1025 aa16.61■□□□□ 0.25
MTHFD1-209ENST00000554768 C2CD5Q86YS7 1000 aa16.61■□□□□ 0.25
MTHFD1-209ENST00000554768 KIF13BQ9NQT8 1826 aa16.61■□□□□ 0.25
MTHFD1-209ENST00000554768 KLRG2A4D1S0 409 aaPredicted RBP16.6■□□□□ 0.25
MTHFD1-209ENST00000554768 NPHP1O15259 732 aa16.6■□□□□ 0.25
MTHFD1-209ENST00000554768 G2E3Q7L622 706 aa16.6■□□□□ 0.25
MTHFD1-209ENST00000554768 NYXQ9GZU5 481 aa16.6■□□□□ 0.25
MTHFD1-209ENST00000554768 PDZRN3Q9UPQ7 1066 aa16.6■□□□□ 0.25
MTHFD1-209ENST00000554768 NTSR2O95665 410 aa16.59■□□□□ 0.25
MTHFD1-209ENST00000554768 GTF2E1P29083 439 aaPredicted RBP16.59■□□□□ 0.25
MTHFD1-209ENST00000554768 ERFEQ4G0M1 354 aa16.59■□□□□ 0.25
MTHFD1-209ENST00000554768 RIC3Q7Z5B4 369 aa16.59■□□□□ 0.25
MTHFD1-209ENST00000554768 NLRP10Q86W26 655 aa16.59■□□□□ 0.25
MTHFD1-209ENST00000554768 NUTM1Q86Y26 1132 aa16.59■□□□□ 0.25
MTHFD1-209ENST00000554768 ISCA1Q9BUE6 129 aa16.59■□□□□ 0.25
MTHFD1-209ENST00000554768 BCS1LQ9Y276 419 aa16.59■□□□□ 0.25
MTHFD1-209ENST00000554768 AFDNP55196 1824 aaKnown RBP16.59■□□□□ 0.25
MTHFD1-209ENST00000554768 TRIM28Q13263 835 aaKnown RBP16.58■□□□□ 0.24
MTHFD1-209ENST00000554768 DALRD3Q5D0E6 543 aaKnown RBP16.58■□□□□ 0.24
MTHFD1-209ENST00000554768 PPP1R42Q7Z4L9 355 aa16.58■□□□□ 0.24
MTHFD1-209ENST00000554768 UTP14AQ9BVJ6 771 aaKnown RBP16.58■□□□□ 0.24
MTHFD1-209ENST00000554768 IBTKQ9P2D0 1353 aaPredicted RBP16.58■□□□□ 0.24
MTHFD1-209ENST00000554768 KIAA1551Q9HCM1 1747 aa16.58■□□□□ 0.24
MTHFD1-209ENST00000554768 DDX58O95786 925 aaKnown RBP16.57■□□□□ 0.24
MTHFD1-209ENST00000554768 SRGNP10124 158 aa16.57■□□□□ 0.24
MTHFD1-209ENST00000554768 SLC10A5Q5PT55 438 aa16.57■□□□□ 0.24
MTHFD1-209ENST00000554768 KSR2Q6VAB6 950 aa16.57■□□□□ 0.24
MTHFD1-209ENST00000554768 PI4KAP2A4QPH2 592 aa16.56■□□□□ 0.24
MTHFD1-209ENST00000554768 ATP5J2-PTCD1G3V325 749 aa16.56■□□□□ 0.24
MTHFD1-209ENST00000554768 HNRNPUQ00839 825 aaKnown RBP eCLIP16.56■□□□□ 0.24
MTHFD1-209ENST00000554768 PI4KAP1Q8N8J0 262 aa16.56■□□□□ 0.24
MTHFD1-209ENST00000554768 ABCC12Q96J65 1359 aa16.55■□□□□ 0.24
MTHFD1-209ENST00000554768 NUP98P52948 1817 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms