RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CABP1Q9NZU7 370 aa6.78□□□□□ -1.32
VTI1B-203ENST00000554636 MKRN1Q9UHC7 482 aaKnown RBP6.78□□□□□ -1.32
VTI1B-203ENST00000554636 ZNF777Q9ULD5 760 aaPredicted RBP6.78□□□□□ -1.32
VTI1B-203ENST00000554636 PARP3Q9Y6F1 533 aa6.78□□□□□ -1.32
VTI1B-203ENST00000554636 PCF11O94913 1555 aaKnown RBP6.78□□□□□ -1.32
VTI1B-203ENST00000554636 TTC37Q6PGP7 1564 aa6.78□□□□□ -1.32
VTI1B-203ENST00000554636 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.77□□□□□ -1.33
VTI1B-203ENST00000554636 ARAP3Q8WWN8 1544 aa6.77□□□□□ -1.33
VTI1B-203ENST00000554636 FAM181BA6NEQ2 426 aa6.77□□□□□ -1.33
VTI1B-203ENST00000554636 A6NJY4 79 aa6.77□□□□□ -1.33
VTI1B-203ENST00000554636 CSB-PGBD3P0DP91 1061 aa6.77□□□□□ -1.33
VTI1B-203ENST00000554636 TRIM50Q86XT4 487 aa6.77□□□□□ -1.33
VTI1B-203ENST00000554636 PLEKHM2Q8IWE5 1019 aa6.77□□□□□ -1.33
VTI1B-203ENST00000554636 PGBD3Q8N328 593 aa6.77□□□□□ -1.33
VTI1B-203ENST00000554636 OGFOD1Q8N543 542 aa6.77□□□□□ -1.33
VTI1B-203ENST00000554636 TRERF1Q96PN7 1200 aa6.77□□□□□ -1.33
VTI1B-203ENST00000554636 NEO1Q92859 1461 aa6.77□□□□□ -1.33
VTI1B-203ENST00000554636 FRMPD1Q5SYB0 1578 aa6.77□□□□□ -1.33
VTI1B-203ENST00000554636 PALM3A6NDB9 673 aaPredicted RBP6.76□□□□□ -1.33
VTI1B-203ENST00000554636 BACH1O14867 736 aa6.76□□□□□ -1.33
VTI1B-203ENST00000554636 ADAMTS2O95450 1211 aa6.76□□□□□ -1.33
VTI1B-203ENST00000554636 THBS1P07996 1170 aa6.76□□□□□ -1.33
VTI1B-203ENST00000554636 CCDC102BQ68D86 513 aa6.76□□□□□ -1.33
VTI1B-203ENST00000554636 TNS4Q8IZW8 715 aa6.76□□□□□ -1.33
VTI1B-203ENST00000554636 SVOPQ8N4V2 548 aa6.76□□□□□ -1.33
VTI1B-203ENST00000554636 WHAMMQ8TF30 809 aa6.76□□□□□ -1.33
VTI1B-203ENST00000554636 NIFKQ9BYG3 293 aaKnown RBP6.76□□□□□ -1.33
VTI1B-203ENST00000554636 DNAAF2Q9NVR5 837 aaKnown RBP6.76□□□□□ -1.33
VTI1B-203ENST00000554636 MAFBQ9Y5Q3 323 aaPredicted RBP6.76□□□□□ -1.33
VTI1B-203ENST00000554636 ATP1A2P50993 1020 aa6.75□□□□□ -1.33
VTI1B-203ENST00000554636 GMCL1Q96IK5 515 aa6.75□□□□□ -1.33
VTI1B-203ENST00000554636 SLC4A9Q96Q91 983 aa6.75□□□□□ -1.33
VTI1B-203ENST00000554636 KIF14Q15058 1648 aa6.75□□□□□ -1.33
VTI1B-203ENST00000554636 CASKIN1Q8WXD9 1431 aa6.75□□□□□ -1.33
VTI1B-203ENST00000554636 CFAP74Q9C0B2 1584 aa6.74□□□□□ -1.33
VTI1B-203ENST00000554636 ADGRL1O94910 1474 aa6.74□□□□□ -1.33
VTI1B-203ENST00000554636 PHLDB1Q86UU1 1377 aa6.74□□□□□ -1.33
VTI1B-203ENST00000554636 PLEKHD1A6NEE1 506 aa6.74□□□□□ -1.33
VTI1B-203ENST00000554636 SFI1A8K8P3 1242 aa6.74□□□□□ -1.33
VTI1B-203ENST00000554636 RASA1P20936 1047 aa6.74□□□□□ -1.33
VTI1B-203ENST00000554636 LMOD1P29536 600 aaPredicted RBP6.74□□□□□ -1.33
VTI1B-203ENST00000554636 MTFR1Q15390 333 aa6.74□□□□□ -1.33
VTI1B-203ENST00000554636 EFHC2Q5JST6 749 aa6.74□□□□□ -1.33
VTI1B-203ENST00000554636 PPP1R12CQ9BZL4 782 aa6.74□□□□□ -1.33
VTI1B-203ENST00000554636 MBIPQ9NS73 344 aa6.74□□□□□ -1.33
VTI1B-203ENST00000554636 IQSEC3Q9UPP2 1182 aaPredicted RBP6.74□□□□□ -1.33
VTI1B-203ENST00000554636 CLIP1P30622 1438 aa6.74□□□□□ -1.33
VTI1B-203ENST00000554636 TROQ12816 1431 aaPredicted RBP6.74□□□□□ -1.33
VTI1B-203ENST00000554636 FYCO1Q9BQS8 1478 aa6.73□□□□□ -1.33
VTI1B-203ENST00000554636 RICTORQ6R327 1708 aa6.73□□□□□ -1.33
VTI1B-203ENST00000554636 CDK2AP1O14519 115 aa6.73□□□□□ -1.33
VTI1B-203ENST00000554636 ZBTB7BO15156 539 aaPredicted RBP6.73□□□□□ -1.33
VTI1B-203ENST00000554636 LGR5O75473 907 aa6.73□□□□□ -1.33
VTI1B-203ENST00000554636 ATP4AP20648 1035 aa6.73□□□□□ -1.33
VTI1B-203ENST00000554636 NBPF1Q3BBV0 1214 aa6.73□□□□□ -1.33
VTI1B-203ENST00000554636 ARSJQ5FYB0 599 aaPredicted RBP6.73□□□□□ -1.33
VTI1B-203ENST00000554636 ZNF385CQ66K41 422 aaPredicted RBP6.73□□□□□ -1.33
VTI1B-203ENST00000554636 SLC9A9Q8IVB4 645 aa6.73□□□□□ -1.33
VTI1B-203ENST00000554636 TSEN2Q8NCE0 465 aaKnown RBP6.73□□□□□ -1.33
VTI1B-203ENST00000554636 SCHIP1Q9P0W5 487 aaPredicted RBP6.73□□□□□ -1.33
VTI1B-203ENST00000554636 ZNF232Q9UNY5 417 aa6.73□□□□□ -1.33
VTI1B-203ENST00000554636 RBM19Q9Y4C8 960 aaKnown RBP6.73□□□□□ -1.33
VTI1B-203ENST00000554636 FANCAO15360 1455 aa6.73□□□□□ -1.33
VTI1B-203ENST00000554636 CCDC18Q5T9S5 1454 aa6.73□□□□□ -1.33
VTI1B-203ENST00000554636 MX2P20592 715 aa6.72□□□□□ -1.33
VTI1B-203ENST00000554636 TXLNAP40222 546 aa6.72□□□□□ -1.33
VTI1B-203ENST00000554636 SRSF11Q05519 484 aaKnown RBP6.72□□□□□ -1.33
VTI1B-203ENST00000554636 ABHD17AQ96GS6 310 aa6.72□□□□□ -1.33
VTI1B-203ENST00000554636 PLCH2O75038 1416 aa6.72□□□□□ -1.33
VTI1B-203ENST00000554636 AKNAQ7Z591 1439 aa6.72□□□□□ -1.33
VTI1B-203ENST00000554636 MYO5CQ9NQX4 1742 aa6.72□□□□□ -1.33
VTI1B-203ENST00000554636 ZMYM4Q5VZL5 1548 aa6.71□□□□□ -1.33
VTI1B-203ENST00000554636 ARHGEF40Q8TER5 1519 aa6.71□□□□□ -1.33
VTI1B-203ENST00000554636 SLURP2P0DP57 97 aa6.71□□□□□ -1.34
VTI1B-203ENST00000554636 TATP17735 454 aaPredicted RBP6.71□□□□□ -1.34
VTI1B-203ENST00000554636 RFX1P22670 979 aa6.71□□□□□ -1.34
VTI1B-203ENST00000554636 EPHA4P54764 986 aa6.71□□□□□ -1.34
VTI1B-203ENST00000554636 CRTC2Q53ET0 693 aaPredicted RBP6.71□□□□□ -1.34
VTI1B-203ENST00000554636 CDCA8Q53HL2 280 aa6.71□□□□□ -1.34
VTI1B-203ENST00000554636 SH3PXD2AQ5TCZ1 1133 aa6.71□□□□□ -1.34
VTI1B-203ENST00000554636 LYPD4Q6UWN0 246 aa6.71□□□□□ -1.34
VTI1B-203ENST00000554636 BICDL1Q6ZP65 573 aa6.71□□□□□ -1.34
VTI1B-203ENST00000554636 ZNF295-AS1Q8N0V1 137 aa6.71□□□□□ -1.34
VTI1B-203ENST00000554636 LARGE2Q8N3Y3 721 aa6.71□□□□□ -1.34
VTI1B-203ENST00000554636 ZDHHC1Q8WTX9 485 aa6.71□□□□□ -1.34
VTI1B-203ENST00000554636 TSPAN10Q9H1Z9 355 aaPredicted RBP6.71□□□□□ -1.34
VTI1B-203ENST00000554636 DENND4BO75064 1496 aaPredicted RBP6.71□□□□□ -1.34
VTI1B-203ENST00000554636 A0A1W2PNR3 127 aa6.7□□□□□ -1.34
VTI1B-203ENST00000554636 DCDC2BA2VCK2 349 aa6.7□□□□□ -1.34
VTI1B-203ENST00000554636 FOXK2Q01167 660 aa6.7□□□□□ -1.34
VTI1B-203ENST00000554636 LARP1Q6PKG0 1096 aaKnown RBP6.7□□□□□ -1.34
VTI1B-203ENST00000554636 SIX5Q8N196 739 aa6.7□□□□□ -1.34
VTI1B-203ENST00000554636 L3MBTL2Q969R5 705 aa6.7□□□□□ -1.34
VTI1B-203ENST00000554636 GJA3Q9Y6H8 435 aa6.7□□□□□ -1.34
VTI1B-203ENST00000554636 PREX2Q70Z35 1606 aa6.69□□□□□ -1.34
VTI1B-203ENST00000554636 CEP162Q5TB80 1403 aa6.69□□□□□ -1.34
VTI1B-203ENST00000554636 POGZQ7Z3K3 1410 aa6.69□□□□□ -1.34
VTI1B-203ENST00000554636 BNIP3LO60238 219 aa6.69□□□□□ -1.34
VTI1B-203ENST00000554636 RAPGEF3O95398 923 aa6.69□□□□□ -1.34
VTI1B-203ENST00000554636 MAP3K10Q02779 954 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms