RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 TMPRSS4Q9NRS4 437 aa9.24□□□□□ -0.93
SCFD1-212ENST00000554486 CEP152O94986 1710 aa9.24□□□□□ -0.93
SCFD1-212ENST00000554486 ARID4BQ4LE39 1312 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-212ENST00000554486 ABCC3O15438 1527 aa9.23□□□□□ -0.93
SCFD1-212ENST00000554486 SCTRP47872 440 aa9.23□□□□□ -0.93
SCFD1-212ENST00000554486 MLECQ14165 292 aa9.23□□□□□ -0.93
SCFD1-212ENST00000554486 MAP7D1Q3KQU3 841 aa9.23□□□□□ -0.93
SCFD1-212ENST00000554486 Q6ZVU0 165 aa9.23□□□□□ -0.93
SCFD1-212ENST00000554486 MPHOSPH9Q99550 1183 aa9.23□□□□□ -0.93
SCFD1-212ENST00000554486 KANK1Q14678 1352 aa9.23□□□□□ -0.93
SCFD1-212ENST00000554486 LMTK2Q8IWU2 1503 aa9.22□□□□□ -0.93
SCFD1-212ENST00000554486 DOLKQ9UPQ8 538 aa9.22□□□□□ -0.93
SCFD1-212ENST00000554486 PCDHB11Q9Y5F2 797 aa9.22□□□□□ -0.93
SCFD1-212ENST00000554486 TET3O43151 1660 aa9.22□□□□□ -0.93
SCFD1-212ENST00000554486 ZC3H13Q5T200 1668 aaKnown RBP9.21□□□□□ -0.93
SCFD1-212ENST00000554486 LILRA1O75019 489 aa9.21□□□□□ -0.94
SCFD1-212ENST00000554486 CBLBQ13191 982 aa9.21□□□□□ -0.94
SCFD1-212ENST00000554486 TREML4Q6UXN2 200 aa9.21□□□□□ -0.94
SCFD1-212ENST00000554486 E9PCH4 1651 aa9.2□□□□□ -0.94
SCFD1-212ENST00000554486 CLTCQ00610 1675 aaKnown RBP9.2□□□□□ -0.94
SCFD1-212ENST00000554486 MAN1A2O60476 641 aa9.2□□□□□ -0.94
SCFD1-212ENST00000554486 CDCA8Q53HL2 280 aa9.2□□□□□ -0.94
SCFD1-212ENST00000554486 ZNF784Q8NCA9 323 aaPredicted RBP9.2□□□□□ -0.94
SCFD1-212ENST00000554486 SLC16A10Q8TF71 515 aa9.2□□□□□ -0.94
SCFD1-212ENST00000554486 PBXIP1Q96AQ6 731 aa9.2□□□□□ -0.94
SCFD1-212ENST00000554486 CFAP65Q6ZU64 1925 aaKnown RBP9.2□□□□□ -0.94
SCFD1-212ENST00000554486 WASHC2CQ9Y4E1 1318 aa9.2□□□□□ -0.94
SCFD1-212ENST00000554486 EFCAB6Q5THR3 1501 aa9.2□□□□□ -0.94
SCFD1-212ENST00000554486 CAMSAP1Q5T5Y3 1602 aa9.2□□□□□ -0.94
SCFD1-212ENST00000554486 ADAMTSL3P82987 1691 aa9.2□□□□□ -0.94
SCFD1-212ENST00000554486 TERTO14746 1132 aaKnown RBP9.19□□□□□ -0.94
SCFD1-212ENST00000554486 ADD1P35611 737 aaKnown RBP9.19□□□□□ -0.94
SCFD1-212ENST00000554486 ERVK-9P63128 1117 aa9.19□□□□□ -0.94
SCFD1-212ENST00000554486 OXLD1Q5BKU9 147 aa9.19□□□□□ -0.94
SCFD1-212ENST00000554486 NXF1Q9UBU9 619 aaKnown RBP9.19□□□□□ -0.94
SCFD1-212ENST00000554486 MKRN1Q9UHC7 482 aaKnown RBP9.19□□□□□ -0.94
SCFD1-212ENST00000554486 FER1L4A9Z1Z3 1794 aa9.19□□□□□ -0.94
SCFD1-212ENST00000554486 LZTS3O60299 673 aaPredicted RBP9.18□□□□□ -0.94
SCFD1-212ENST00000554486 WFS1O76024 890 aa9.18□□□□□ -0.94
SCFD1-212ENST00000554486 DKK1O94907 266 aa9.18□□□□□ -0.94
SCFD1-212ENST00000554486 CLDN10P78369 228 aa9.18□□□□□ -0.94
SCFD1-212ENST00000554486 NPATQ14207 1427 aa9.18□□□□□ -0.94
SCFD1-212ENST00000554486 NPAS3Q8IXF0 933 aa9.18□□□□□ -0.94
SCFD1-212ENST00000554486 MADDQ8WXG6 1647 aa9.18□□□□□ -0.94
SCFD1-212ENST00000554486 ESF1Q9H501 851 aaKnown RBP9.18□□□□□ -0.94
SCFD1-212ENST00000554486 PCDHGA11Q9Y5H2 935 aa9.18□□□□□ -0.94
SCFD1-212ENST00000554486 MROH2AA6NES4 1674 aa9.17□□□□□ -0.94
SCFD1-212ENST00000554486 ARHGAP31Q2M1Z3 1444 aa9.17□□□□□ -0.94
SCFD1-212ENST00000554486 CNTLNQ9NXG0 1405 aa9.17□□□□□ -0.94
SCFD1-212ENST00000554486 ANKRD30BQ9BXX2 1392 aa9.17□□□□□ -0.94
SCFD1-212ENST00000554486 ZBTB7BO15156 539 aaPredicted RBP9.17□□□□□ -0.94
SCFD1-212ENST00000554486 CRTC2Q53ET0 693 aaPredicted RBP9.17□□□□□ -0.94
SCFD1-212ENST00000554486 CCER1Q8TC90 406 aaPredicted RBP9.17□□□□□ -0.94
SCFD1-212ENST00000554486 OSBPL3Q9H4L5 887 aa9.17□□□□□ -0.94
SCFD1-212ENST00000554486 CYLDQ9NQC7 956 aa9.17□□□□□ -0.94
SCFD1-212ENST00000554486 KIAA1024Q9UPX6 916 aa9.17□□□□□ -0.94
SCFD1-212ENST00000554486 PLA2R1Q13018 1463 aa9.16□□□□□ -0.94
SCFD1-212ENST00000554486 SOS2Q07890 1332 aaPredicted RBP9.16□□□□□ -0.94
SCFD1-212ENST00000554486 TTLL8A6PVC2 850 aa9.16□□□□□ -0.94
SCFD1-212ENST00000554486 SPINT1O43278 529 aa9.16□□□□□ -0.94
SCFD1-212ENST00000554486 PPP1R15AO75807 674 aaPredicted RBP9.16□□□□□ -0.94
SCFD1-212ENST00000554486 RELBQ01201 579 aa9.16□□□□□ -0.94
SCFD1-212ENST00000554486 EML3Q32P44 896 aa9.16□□□□□ -0.94
SCFD1-212ENST00000554486 KDF1Q8NAX2 398 aaPredicted RBP9.16□□□□□ -0.94
SCFD1-212ENST00000554486 VRTNQ9H8Y1 702 aa9.16□□□□□ -0.94
SCFD1-212ENST00000554486 SPHKAPQ2M3C7 1700 aa9.16□□□□□ -0.94
SCFD1-212ENST00000554486 RIMS1Q86UR5 1692 aaKnown RBP9.16□□□□□ -0.94
SCFD1-212ENST00000554486 RPRD2Q5VT52 1461 aaKnown RBP9.15□□□□□ -0.94
SCFD1-212ENST00000554486 PTPRTO14522 1441 aa9.15□□□□□ -0.94
SCFD1-212ENST00000554486 ZMYM3Q14202 1370 aa9.15□□□□□ -0.94
SCFD1-212ENST00000554486 ADH1AP07327 375 aa9.15□□□□□ -0.94
SCFD1-212ENST00000554486 NFX1Q12986 1120 aaKnown RBP9.15□□□□□ -0.94
SCFD1-212ENST00000554486 C3P01024 1663 aa9.15□□□□□ -0.94
SCFD1-212ENST00000554486 PREX1Q8TCU6 1659 aa9.14□□□□□ -0.95
SCFD1-212ENST00000554486 CLSPNQ9HAW4 1339 aa9.14□□□□□ -0.95
SCFD1-212ENST00000554486 ATG7O95352 703 aa9.14□□□□□ -0.95
SCFD1-212ENST00000554486 USP4Q13107 963 aa9.14□□□□□ -0.95
SCFD1-212ENST00000554486 PTK7Q13308 1070 aa9.14□□□□□ -0.95
SCFD1-212ENST00000554486 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.14□□□□□ -0.95
SCFD1-212ENST00000554486 CC2D2BQ6DHV5 1058 aa9.14□□□□□ -0.95
SCFD1-212ENST00000554486 AGBL1Q96MI9 1066 aa9.14□□□□□ -0.95
SCFD1-212ENST00000554486 NOD1Q9Y239 953 aa9.14□□□□□ -0.95
SCFD1-212ENST00000554486 ERVK-7P63135 1459 aa9.14□□□□□ -0.95
SCFD1-212ENST00000554486 NOS1P29475 1434 aa9.14□□□□□ -0.95
SCFD1-212ENST00000554486 SYNMO15061 1565 aa9.13□□□□□ -0.95
SCFD1-212ENST00000554486 SOBPA7XYQ1 873 aa9.13□□□□□ -0.95
SCFD1-212ENST00000554486 ATP5J2-PTCD1G3V325 749 aa9.13□□□□□ -0.95
SCFD1-212ENST00000554486 STAU1O95793 577 aaKnown RBP9.13□□□□□ -0.95
SCFD1-212ENST00000554486 PTGIRP43119 386 aa9.13□□□□□ -0.95
SCFD1-212ENST00000554486 GTF2IP78347 998 aa9.13□□□□□ -0.95
SCFD1-212ENST00000554486 OGFOD1Q8N543 542 aa9.13□□□□□ -0.95
SCFD1-212ENST00000554486 ARXQ96QS3 562 aa9.13□□□□□ -0.95
SCFD1-212ENST00000554486 ZMIZ1Q9ULJ6 1067 aa9.13□□□□□ -0.95
SCFD1-212ENST00000554486 TRPM2O94759 1503 aa9.13□□□□□ -0.95
SCFD1-212ENST00000554486 SPATA31D1Q6ZQQ2 1576 aa9.12□□□□□ -0.95
SCFD1-212ENST00000554486 FAM196BA6NMK8 535 aa9.12□□□□□ -0.95
SCFD1-212ENST00000554486 CEBPAP49715 358 aaPredicted RBP9.12□□□□□ -0.95
SCFD1-212ENST00000554486 SIN3AQ96ST3 1273 aa9.12□□□□□ -0.95
SCFD1-212ENST00000554486 ZNF395Q9H8N7 513 aaPredicted RBP9.12□□□□□ -0.95
SCFD1-212ENST00000554486 POLMQ9NP87 494 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms