RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 TAF1LQ8IZX4 1826 aa14.86□□□□□ -0.03
NEK9-202ENST00000553823 RREB1Q92766 1687 aa14.86□□□□□ -0.03
NEK9-202ENST00000553823 ZBTB7BO15156 539 aaPredicted RBP14.85□□□□□ -0.03
NEK9-202ENST00000553823 IL6STP40189 918 aaPredicted RBP14.85□□□□□ -0.03
NEK9-202ENST00000553823 INTS5Q6P9B9 1019 aaKnown RBP14.85□□□□□ -0.03
NEK9-202ENST00000553823 PLBD2Q8NHP8 589 aa14.85□□□□□ -0.03
NEK9-202ENST00000553823 ARFGEF2Q9Y6D5 1785 aa14.85□□□□□ -0.03
NEK9-202ENST00000553823 ATP10DQ9P241 1426 aa14.84□□□□□ -0.03
NEK9-202ENST00000553823 TTLL7Q6ZT98 887 aa14.84□□□□□ -0.03
NEK9-202ENST00000553823 LINC00116Q8NCU8 138 aa14.84□□□□□ -0.03
NEK9-202ENST00000553823 CCDC136Q96JN2 1154 aa14.84□□□□□ -0.03
NEK9-202ENST00000553823 SRCIN1Q9C0H9 1055 aa14.84□□□□□ -0.03
NEK9-202ENST00000553823 ZBTB40Q9NUA8 1239 aa14.84□□□□□ -0.03
NEK9-202ENST00000553823 ZNF330Q9Y3S2 320 aaPredicted RBP14.84□□□□□ -0.03
NEK9-202ENST00000553823 CNTNAP4Q9C0A0 1308 aa14.84□□□□□ -0.03
NEK9-202ENST00000553823 KCNQ4P56696 695 aa14.83□□□□□ -0.04
NEK9-202ENST00000553823 BEND3Q5T5X7 828 aa14.83□□□□□ -0.04
NEK9-202ENST00000553823 B4GALNT3Q6L9W6 998 aa14.83□□□□□ -0.04
NEK9-202ENST00000553823 NPM2Q86SE8 214 aaKnown RBP14.83□□□□□ -0.04
NEK9-202ENST00000553823 METTL22Q9BUU2 404 aaPredicted RBP14.83□□□□□ -0.04
NEK9-202ENST00000553823 NUP188Q5SRE5 1749 aa14.83□□□□□ -0.04
NEK9-202ENST00000553823 EIF5P55010 431 aaKnown RBP14.82□□□□□ -0.04
NEK9-202ENST00000553823 NEXNQ0ZGT2 675 aa14.82□□□□□ -0.04
NEK9-202ENST00000553823 SLC27A3Q5K4L6 730 aa14.82□□□□□ -0.04
NEK9-202ENST00000553823 RC3H1Q5TC82 1133 aaKnown RBP14.82□□□□□ -0.04
NEK9-202ENST00000553823 KIF6Q6ZMV9 814 aa14.82□□□□□ -0.04
NEK9-202ENST00000553823 TNS1Q9HBL0 1735 aaKnown RBP14.81□□□□□ -0.04
NEK9-202ENST00000553823 PLSCR1O15162 318 aa14.81□□□□□ -0.04
NEK9-202ENST00000553823 ALDH1L1O75891 902 aa14.81□□□□□ -0.04
NEK9-202ENST00000553823 APBA3O96018 575 aa14.81□□□□□ -0.04
NEK9-202ENST00000553823 LINS1Q8NG48 757 aa14.81□□□□□ -0.04
NEK9-202ENST00000553823 AFDNP55196 1824 aaKnown RBP14.8□□□□□ -0.04
NEK9-202ENST00000553823 HMGB2P26583 209 aaKnown RBP14.8□□□□□ -0.04
NEK9-202ENST00000553823 ARXQ96QS3 562 aa14.8□□□□□ -0.04
NEK9-202ENST00000553823 MEIS3Q99687 375 aa14.8□□□□□ -0.04
NEK9-202ENST00000553823 MYD88Q99836 296 aa14.8□□□□□ -0.04
NEK9-202ENST00000553823 ZBTB3Q9H5J0 574 aa14.8□□□□□ -0.04
NEK9-202ENST00000553823 MAP3K15Q6ZN16 1313 aa14.8□□□□□ -0.04
NEK9-202ENST00000553823 NUP98P52948 1817 aa14.8□□□□□ -0.04
NEK9-202ENST00000553823 GNAI3P08754 354 aa14.79□□□□□ -0.04
NEK9-202ENST00000553823 C4BP0C0L5 1744 aa14.79□□□□□ -0.04
NEK9-202ENST00000553823 DZIP3Q86Y13 1208 aaKnown RBP14.79□□□□□ -0.04
NEK9-202ENST00000553823 USP44Q9H0E7 712 aa14.79□□□□□ -0.04
NEK9-202ENST00000553823 LRRC4BQ9NT99 713 aa14.79□□□□□ -0.04
NEK9-202ENST00000553823 PCDHB15Q9Y5E8 787 aa14.79□□□□□ -0.04
NEK9-202ENST00000553823 IBTKQ9P2D0 1353 aaPredicted RBP14.78□□□□□ -0.04
NEK9-202ENST00000553823 A0A087WZG4 1122 aa14.78□□□□□ -0.04
NEK9-202ENST00000553823 NEURL1BA8MQ27 555 aa14.78□□□□□ -0.04
NEK9-202ENST00000553823 ERVV-1B6SEH8 477 aa14.78□□□□□ -0.04
NEK9-202ENST00000553823 RPS6KA4O75676 772 aa14.78□□□□□ -0.04
NEK9-202ENST00000553823 IGKV5-2P06315 115 aa14.78□□□□□ -0.04
NEK9-202ENST00000553823 TXNRD1Q16881 649 aa14.78□□□□□ -0.04
NEK9-202ENST00000553823 CWF19L2Q2TBE0 894 aaKnown RBP14.78□□□□□ -0.04
NEK9-202ENST00000553823 TBC1D2BQ9UPU7 963 aa14.78□□□□□ -0.04
NEK9-202ENST00000553823 RGPD3A6NKT7 1758 aaPredicted RBP14.78□□□□□ -0.04
NEK9-202ENST00000553823 RGPD4Q7Z3J3 1758 aa14.78□□□□□ -0.04
NEK9-202ENST00000553823 COL15A1P39059 1388 aa14.77□□□□□ -0.04
NEK9-202ENST00000553823 GIGYF2Q6Y7W6 1299 aaKnown RBP14.77□□□□□ -0.05
NEK9-202ENST00000553823 C1orf115Q9H7X2 142 aa14.77□□□□□ -0.05
NEK9-202ENST00000553823 ANKRD36CQ5JPF3 1778 aa14.76□□□□□ -0.05
NEK9-202ENST00000553823 ATP5J2-PTCD1G3V325 749 aa14.76□□□□□ -0.05
NEK9-202ENST00000553823 GNPATO15228 680 aa14.76□□□□□ -0.05
NEK9-202ENST00000553823 GNAI2P04899 355 aa14.76□□□□□ -0.05
NEK9-202ENST00000553823 UBTFL1P0CB47 393 aaPredicted RBP14.76□□□□□ -0.05
NEK9-202ENST00000553823 TCIRG1Q13488 830 aa14.76□□□□□ -0.05
NEK9-202ENST00000553823 GCKRQ14397 625 aa14.76□□□□□ -0.05
NEK9-202ENST00000553823 HSP90AB3PQ58FF7 597 aa14.76□□□□□ -0.05
NEK9-202ENST00000553823 PROM2Q8N271 834 aa14.76□□□□□ -0.05
NEK9-202ENST00000553823 AK7Q96M32 723 aa14.76□□□□□ -0.05
NEK9-202ENST00000553823 C9orf78Q9NZ63 289 aaPredicted RBP14.76□□□□□ -0.05
NEK9-202ENST00000553823 RTCBQ9Y3I0 505 aaKnown RBP14.76□□□□□ -0.05
NEK9-202ENST00000553823 GRM8O00222 908 aa14.75□□□□□ -0.05
NEK9-202ENST00000553823 HLFQ16534 295 aa14.75□□□□□ -0.05
NEK9-202ENST00000553823 ISCA1Q9BUE6 129 aa14.75□□□□□ -0.05
NEK9-202ENST00000553823 UBR3Q6ZT12 1888 aa14.75□□□□□ -0.05
NEK9-202ENST00000553823 UTYO14607 1347 aa14.74□□□□□ -0.05
NEK9-202ENST00000553823 CAMTA2O94983 1202 aa14.74□□□□□ -0.05
NEK9-202ENST00000553823 NBPF7P0C2Y1 421 aaPredicted RBP14.74□□□□□ -0.05
NEK9-202ENST00000553823 TRIM28Q13263 835 aaKnown RBP14.74□□□□□ -0.05
NEK9-202ENST00000553823 CCDC191Q8NCU4 936 aa14.74□□□□□ -0.05
NEK9-202ENST00000553823 RWDD1Q9H446 243 aaPredicted RBP14.74□□□□□ -0.05
NEK9-202ENST00000553823 CWC25Q9NXE8 425 aaPredicted RBP14.74□□□□□ -0.05
NEK9-202ENST00000553823 HDAC5Q9UQL6 1122 aa14.74□□□□□ -0.05
NEK9-202ENST00000553823 BCORQ6W2J9 1755 aa14.74□□□□□ -0.05
NEK9-202ENST00000553823 KDM2BQ8NHM5 1336 aa14.73□□□□□ -0.05
NEK9-202ENST00000553823 IGHDP01880 384 aa14.73□□□□□ -0.05
NEK9-202ENST00000553823 SF3B2Q13435 895 aaKnown RBP14.73□□□□□ -0.05
NEK9-202ENST00000553823 HDAC1Q13547 482 aaPredicted RBP14.73□□□□□ -0.05
NEK9-202ENST00000553823 CENPQQ7L2Z9 268 aaPredicted RBP14.73□□□□□ -0.05
NEK9-202ENST00000553823 RPAP2Q8IXW5 612 aaPredicted RBP14.73□□□□□ -0.05
NEK9-202ENST00000553823 LRRFIP2Q9Y608 721 aaKnown RBP14.73□□□□□ -0.05
NEK9-202ENST00000553823 RGL2O15211 777 aa14.72□□□□□ -0.05
NEK9-202ENST00000553823 TRAPPC3LQ5T215 181 aa14.72□□□□□ -0.05
NEK9-202ENST00000553823 CEP85Q6P2H3 762 aa14.72□□□□□ -0.05
NEK9-202ENST00000553823 ANKRD44Q8N8A2 993 aa14.72□□□□□ -0.05
NEK9-202ENST00000553823 NARFQ9UHQ1 456 aa14.72□□□□□ -0.05
NEK9-202ENST00000553823 ZNF652Q9Y2D9 606 aa14.72□□□□□ -0.05
NEK9-202ENST00000553823 GPTP24298 496 aa14.71□□□□□ -0.05
NEK9-202ENST00000553823 CLEC4GQ6UXB4 293 aa14.71□□□□□ -0.05
NEK9-202ENST00000553823 SMIM5Q71RC9 77 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms