RNA–Protein interactions for RNA: ENST00000553699.5

GSKIP-202, Transcript of GSK3B interacting protein, humanhuman

TSL 4

Gene GSKIP, Length 501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-202ENST00000553699 BEGAINQ9BUH8 593 aa12.67□□□□□ -0.38
GSKIP-202ENST00000553699 LAMB4A4D0S4 1761 aa12.66□□□□□ -0.38
GSKIP-202ENST00000553699 KDM3BQ7LBC6 1761 aa12.66□□□□□ -0.38
GSKIP-202ENST00000553699 NRXN2Q9P2S2 1712 aa12.66□□□□□ -0.38
GSKIP-202ENST00000553699 SNRPA1P09661 255 aaKnown RBP12.66□□□□□ -0.38
GSKIP-202ENST00000553699 DPEP1P16444 411 aa12.66□□□□□ -0.38
GSKIP-202ENST00000553699 PNISRQ8TF01 805 aaKnown RBP12.66□□□□□ -0.38
GSKIP-202ENST00000553699 ZNF330Q9Y3S2 320 aaPredicted RBP12.66□□□□□ -0.38
GSKIP-202ENST00000553699 NFIXQ14938 502 aa12.65□□□□□ -0.38
GSKIP-202ENST00000553699 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.38
GSKIP-202ENST00000553699 BCORQ6W2J9 1755 aa12.65□□□□□ -0.38
GSKIP-202ENST00000553699 BRCA1P38398 1863 aaKnown RBP12.65□□□□□ -0.38
GSKIP-202ENST00000553699 TMEM88BA6NKF7 163 aa12.64□□□□□ -0.39
GSKIP-202ENST00000553699 A1BGP04217 495 aa12.64□□□□□ -0.39
GSKIP-202ENST00000553699 DEFB115Q30KQ5 88 aa12.64□□□□□ -0.39
GSKIP-202ENST00000553699 USP16Q9Y5T5 823 aa12.64□□□□□ -0.39
GSKIP-202ENST00000553699 AFDNP55196 1824 aaKnown RBP12.63□□□□□ -0.39
GSKIP-202ENST00000553699 PRAMEF22A3QJZ6 481 aa12.63□□□□□ -0.39
GSKIP-202ENST00000553699 POTECB2RU33 542 aa12.63□□□□□ -0.39
GSKIP-202ENST00000553699 SERPINB2P05120 415 aa12.63□□□□□ -0.39
GSKIP-202ENST00000553699 WDR43Q15061 677 aaKnown RBP eCLIP12.63□□□□□ -0.39
GSKIP-202ENST00000553699 PRKRIP1Q9H875 184 aaPredicted RBP12.63□□□□□ -0.39
GSKIP-202ENST00000553699 TBC1D2BQ9UPU7 963 aa12.63□□□□□ -0.39
GSKIP-202ENST00000553699 CARMIL3Q8ND23 1372 aa12.63□□□□□ -0.39
GSKIP-202ENST00000553699 WDR33Q9C0J8 1336 aaKnown RBP12.62□□□□□ -0.39
GSKIP-202ENST00000553699 LMOD3Q0VAK6 560 aa12.62□□□□□ -0.39
GSKIP-202ENST00000553699 BICDL1Q6ZP65 573 aa12.62□□□□□ -0.39
GSKIP-202ENST00000553699 DZIP3Q86Y13 1208 aaKnown RBP12.62□□□□□ -0.39
GSKIP-202ENST00000553699 THUMPD2Q9BTF0 503 aaKnown RBP12.62□□□□□ -0.39
GSKIP-202ENST00000553699 MIS18AQ9NYP9 233 aa12.62□□□□□ -0.39
GSKIP-202ENST00000553699 PIM2Q9P1W9 311 aa12.62□□□□□ -0.39
GSKIP-202ENST00000553699 ARFGEF1Q9Y6D6 1849 aa12.61□□□□□ -0.39
GSKIP-202ENST00000553699 CAMTA2O94983 1202 aa12.61□□□□□ -0.39
GSKIP-202ENST00000553699 KCNA3P22001 575 aa12.61□□□□□ -0.39
GSKIP-202ENST00000553699 SOX10P56693 466 aa12.61□□□□□ -0.39
GSKIP-202ENST00000553699 RIPK4P57078 832 aa12.61□□□□□ -0.39
GSKIP-202ENST00000553699 DGKZQ13574 1117 aa12.61□□□□□ -0.39
GSKIP-202ENST00000553699 DALRD3Q5D0E6 543 aaKnown RBP12.61□□□□□ -0.39
GSKIP-202ENST00000553699 TBC1D9BQ66K14 1250 aa12.61□□□□□ -0.39
GSKIP-202ENST00000553699 DLEC1Q9Y238 1755 aa12.61□□□□□ -0.39
GSKIP-202ENST00000553699 PASKQ96RG2 1323 aa12.61□□□□□ -0.39
GSKIP-202ENST00000553699 RASSF10A6NK89 507 aa12.6□□□□□ -0.39
GSKIP-202ENST00000553699 CHRNA5P30532 468 aa12.6□□□□□ -0.39
GSKIP-202ENST00000553699 TMPOP42166 694 aaKnown RBP12.6□□□□□ -0.39
GSKIP-202ENST00000553699 PIP4K2AP48426 406 aaPredicted RBP12.6□□□□□ -0.39
GSKIP-202ENST00000553699 ZNF652Q9Y2D9 606 aa12.6□□□□□ -0.39
GSKIP-202ENST00000553699 EIF4A1P60842 406 aaKnown RBP12.59□□□□□ -0.39
GSKIP-202ENST00000553699 DPY19L2Q6NUT2 758 aa12.59□□□□□ -0.39
GSKIP-202ENST00000553699 NBPF15Q8N660 670 aa12.59□□□□□ -0.39
GSKIP-202ENST00000553699 RUNDC1Q96C34 613 aa12.59□□□□□ -0.39
GSKIP-202ENST00000553699 SETDB2Q96T68 719 aa12.59□□□□□ -0.39
GSKIP-202ENST00000553699 ZNF219Q9P2Y4 722 aaPredicted RBP12.59□□□□□ -0.39
GSKIP-202ENST00000553699 TSPYL4Q9UJ04 414 aa12.59□□□□□ -0.39
GSKIP-202ENST00000553699 NBPF26B4DH59 902 aa12.58□□□□□ -0.4
GSKIP-202ENST00000553699 RGL2O15211 777 aa12.58□□□□□ -0.4
GSKIP-202ENST00000553699 LMNB1P20700 586 aa12.58□□□□□ -0.4
GSKIP-202ENST00000553699 NBPF10Q6P3W6 841 aaKnown RBP12.58□□□□□ -0.4
GSKIP-202ENST00000553699 CLEC4GQ6UXB4 293 aa12.58□□□□□ -0.4
GSKIP-202ENST00000553699 CCDC146Q8IYE0 955 aa12.58□□□□□ -0.4
GSKIP-202ENST00000553699 SLC17A8Q8NDX2 589 aa12.58□□□□□ -0.4
GSKIP-202ENST00000553699 BABAM1Q9NWV8 329 aa12.58□□□□□ -0.4
GSKIP-202ENST00000553699 PITPNM2Q9BZ72 1349 aa12.58□□□□□ -0.4
GSKIP-202ENST00000553699 NPHP1O15259 732 aa12.57□□□□□ -0.4
GSKIP-202ENST00000553699 PRR5LQ6MZQ0 368 aa12.57□□□□□ -0.4
GSKIP-202ENST00000553699 CNBD1Q8NA66 436 aa12.57□□□□□ -0.4
GSKIP-202ENST00000553699 PDZRN3Q9UPQ7 1066 aa12.57□□□□□ -0.4
GSKIP-202ENST00000553699 RRP7AQ9Y3A4 280 aaKnown RBP12.57□□□□□ -0.4
GSKIP-202ENST00000553699 ANKRD31Q8N7Z5 1873 aa12.57□□□□□ -0.4
GSKIP-202ENST00000553699 H0YIN7 160 aa12.56□□□□□ -0.4
GSKIP-202ENST00000553699 PDE6BP35913 854 aa12.56□□□□□ -0.4
GSKIP-202ENST00000553699 ST5P78524 1137 aa12.56□□□□□ -0.4
GSKIP-202ENST00000553699 NEUROD2Q15784 382 aa12.56□□□□□ -0.4
GSKIP-202ENST00000553699 C2CD5Q86YS7 1000 aa12.56□□□□□ -0.4
GSKIP-202ENST00000553699 BRIP1Q9BX63 1249 aa12.56□□□□□ -0.4
GSKIP-202ENST00000553699 ADAMTS8Q9UP79 889 aa12.56□□□□□ -0.4
GSKIP-202ENST00000553699 COL11A2P13942 1736 aaPredicted RBP12.56□□□□□ -0.4
GSKIP-202ENST00000553699 ERBB4Q15303 1308 aa12.56□□□□□ -0.4
GSKIP-202ENST00000553699 FXR1P51114 621 aaKnown RBP eCLIP12.55□□□□□ -0.4
GSKIP-202ENST00000553699 TTLL6Q8N841 843 aa12.55□□□□□ -0.4
GSKIP-202ENST00000553699 POTEIP0CG38 1075 aa12.54□□□□□ -0.4
GSKIP-202ENST00000553699 POTEJP0CG39 1038 aa12.54□□□□□ -0.4
GSKIP-202ENST00000553699 KIF6Q6ZMV9 814 aa12.54□□□□□ -0.4
GSKIP-202ENST00000553699 NBPF5PQ86XG9 351 aaPredicted RBP12.54□□□□□ -0.4
GSKIP-202ENST00000553699 TSKSQ9UJT2 592 aa12.54□□□□□ -0.4
GSKIP-202ENST00000553699 NIP7Q9Y221 180 aaKnown RBP eCLIP12.54□□□□□ -0.4
GSKIP-202ENST00000553699 SBF1O95248 1867 aa12.54□□□□□ -0.4
GSKIP-202ENST00000553699 ERVV-1B6SEH8 477 aa12.53□□□□□ -0.4
GSKIP-202ENST00000553699 MYL6BP14649 208 aa12.53□□□□□ -0.4
GSKIP-202ENST00000553699 TRIM35Q9UPQ4 493 aa12.53□□□□□ -0.4
GSKIP-202ENST00000553699 MAP3K15Q6ZN16 1313 aa12.53□□□□□ -0.4
GSKIP-202ENST00000553699 ZNF316A6NFI3 1004 aaPredicted RBP12.52□□□□□ -0.41
GSKIP-202ENST00000553699 CA12O43570 354 aa12.52□□□□□ -0.41
GSKIP-202ENST00000553699 ITGBL1O95965 494 aaPredicted RBP12.52□□□□□ -0.41
GSKIP-202ENST00000553699 ECE1P42892 770 aa12.52□□□□□ -0.41
GSKIP-202ENST00000553699 RASSF7Q02833 373 aa12.52□□□□□ -0.41
GSKIP-202ENST00000553699 HLFQ16534 295 aa12.52□□□□□ -0.41
GSKIP-202ENST00000553699 TPTE2Q6XPS3 522 aa12.52□□□□□ -0.41
GSKIP-202ENST00000553699 LDHDQ86WU2 507 aa12.52□□□□□ -0.41
GSKIP-202ENST00000553699 CCDC24Q8N4L8 307 aa12.52□□□□□ -0.41
GSKIP-202ENST00000553699 NGEFQ8N5V2 710 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms