RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 BCORQ6W2J9 1755 aa17.76■□□□□ 0.43
TUBB3-202ENST00000553656 ERVV-1B6SEH8 477 aa17.76■□□□□ 0.43
TUBB3-202ENST00000553656 TCERG1O14776 1098 aaKnown RBP17.76■□□□□ 0.43
TUBB3-202ENST00000553656 RGL2O15211 777 aa17.76■□□□□ 0.43
TUBB3-202ENST00000553656 PTGER2P43116 358 aa17.76■□□□□ 0.43
TUBB3-202ENST00000553656 TTLL7Q6ZT98 887 aa17.76■□□□□ 0.43
TUBB3-202ENST00000553656 LRP10Q7Z4F1 713 aa17.76■□□□□ 0.43
TUBB3-202ENST00000553656 ZBTB3Q9H5J0 574 aa17.76■□□□□ 0.43
TUBB3-202ENST00000553656 PARP3Q9Y6F1 533 aa17.76■□□□□ 0.43
TUBB3-202ENST00000553656 CLEC4GQ6UXB4 293 aa17.75■□□□□ 0.43
TUBB3-202ENST00000553656 BICDL1Q6ZP65 573 aa17.75■□□□□ 0.43
TUBB3-202ENST00000553656 BCL2L12Q9HB09 334 aa17.75■□□□□ 0.43
TUBB3-202ENST00000553656 COL24A1Q17RW2 1714 aa17.75■□□□□ 0.43
TUBB3-202ENST00000553656 DDX58O95786 925 aaKnown RBP17.74■□□□□ 0.43
TUBB3-202ENST00000553656 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
TUBB3-202ENST00000553656 CT47B1P0C2W7 299 aaPredicted RBP17.74■□□□□ 0.43
TUBB3-202ENST00000553656 ZNF428Q96B54 188 aa17.74■□□□□ 0.43
TUBB3-202ENST00000553656 YTHDC1Q96MU7 727 aaKnown RBP17.74■□□□□ 0.43
TUBB3-202ENST00000553656 SGIP1Q9BQI5 828 aa17.74■□□□□ 0.43
TUBB3-202ENST00000553656 NFIXQ14938 502 aa17.73■□□□□ 0.43
TUBB3-202ENST00000553656 SETDB2Q96T68 719 aa17.73■□□□□ 0.43
TUBB3-202ENST00000553656 HSP90AB3PQ58FF7 597 aa17.72■□□□□ 0.43
TUBB3-202ENST00000553656 TBC1D9BQ66K14 1250 aa17.72■□□□□ 0.43
TUBB3-202ENST00000553656 ANKRD13DQ6ZTN6 518 aa17.72■□□□□ 0.43
TUBB3-202ENST00000553656 RIC3Q7Z5B4 369 aa17.72■□□□□ 0.43
TUBB3-202ENST00000553656 KLHL34Q8N239 644 aa17.72■□□□□ 0.43
TUBB3-202ENST00000553656 PLBD2Q8NHP8 589 aa17.72■□□□□ 0.43
TUBB3-202ENST00000553656 CARMIL3Q8ND23 1372 aa17.71■□□□□ 0.43
TUBB3-202ENST00000553656 NPHP1O15259 732 aa17.71■□□□□ 0.43
TUBB3-202ENST00000553656 TM4SF1P30408 202 aa17.71■□□□□ 0.43
TUBB3-202ENST00000553656 HLFQ16534 295 aa17.71■□□□□ 0.43
TUBB3-202ENST00000553656 GIGYF2Q6Y7W6 1299 aaKnown RBP17.71■□□□□ 0.43
TUBB3-202ENST00000553656 PHAXQ9H814 394 aaKnown RBP17.71■□□□□ 0.43
TUBB3-202ENST00000553656 NIP7Q9Y221 180 aaKnown RBP eCLIP17.71■□□□□ 0.43
TUBB3-202ENST00000553656 DDR1Q08345 913 aa17.7■□□□□ 0.42
TUBB3-202ENST00000553656 ATP10DQ9P241 1426 aa17.7■□□□□ 0.42
TUBB3-202ENST00000553656 POLRMTO00411 1230 aaKnown RBP17.69■□□□□ 0.42
TUBB3-202ENST00000553656 FLIIQ13045 1269 aa17.69■□□□□ 0.42
TUBB3-202ENST00000553656 FKBP5Q13451 457 aaPredicted RBP17.69■□□□□ 0.42
TUBB3-202ENST00000553656 CACNA1FO60840 1977 aa17.68■□□□□ 0.42
TUBB3-202ENST00000553656 SERPINB2P05120 415 aa17.68■□□□□ 0.42
TUBB3-202ENST00000553656 GPTP24298 496 aa17.68■□□□□ 0.42
TUBB3-202ENST00000553656 ALDH1L2Q3SY69 923 aa17.68■□□□□ 0.42
TUBB3-202ENST00000553656 SMC4Q9NTJ3 1288 aa17.68■□□□□ 0.42
TUBB3-202ENST00000553656 G2E3Q7L622 706 aa17.67■□□□□ 0.42
TUBB3-202ENST00000553656 NBPF5PQ86XG9 351 aaPredicted RBP17.67■□□□□ 0.42
TUBB3-202ENST00000553656 NUP98P52948 1817 aa17.67■□□□□ 0.42
TUBB3-202ENST00000553656 GTF2E1P29083 439 aaPredicted RBP17.66■□□□□ 0.42
TUBB3-202ENST00000553656 TCIRG1Q13488 830 aa17.66■□□□□ 0.42
TUBB3-202ENST00000553656 PARP10Q53GL7 1025 aa17.66■□□□□ 0.42
TUBB3-202ENST00000553656 KSR2Q6VAB6 950 aa17.66■□□□□ 0.42
TUBB3-202ENST00000553656 CNBD1Q8NA66 436 aa17.66■□□□□ 0.42
TUBB3-202ENST00000553656 SSH1Q8WYL5 1049 aa17.66■□□□□ 0.42
TUBB3-202ENST00000553656 BCL2L13Q9BXK5 485 aa17.66■□□□□ 0.42
TUBB3-202ENST00000553656 FHDC1Q9C0D6 1143 aaPredicted RBP17.66■□□□□ 0.42
TUBB3-202ENST00000553656 NYXQ9GZU5 481 aa17.66■□□□□ 0.42
TUBB3-202ENST00000553656 MAP3K2Q9Y2U5 619 aa17.66■□□□□ 0.42
TUBB3-202ENST00000553656 ARFGEF2Q9Y6D5 1785 aa17.66■□□□□ 0.42
TUBB3-202ENST00000553656 PI4KAP2A4QPH2 592 aa17.65■□□□□ 0.42
TUBB3-202ENST00000553656 FAM177BA6PVY3 158 aa17.65■□□□□ 0.42
TUBB3-202ENST00000553656 ST5P78524 1137 aa17.65■□□□□ 0.42
TUBB3-202ENST00000553656 NEXNQ0ZGT2 675 aa17.65■□□□□ 0.42
TUBB3-202ENST00000553656 TPTE2Q6XPS3 522 aa17.65■□□□□ 0.42
TUBB3-202ENST00000553656 ZNF34Q8IZ26 560 aa17.65■□□□□ 0.42
TUBB3-202ENST00000553656 MRPL50Q8N5N7 158 aaKnown RBP17.65■□□□□ 0.42
TUBB3-202ENST00000553656 PI4KAP1Q8N8J0 262 aa17.65■□□□□ 0.42
TUBB3-202ENST00000553656 CD2APQ9Y5K6 639 aa17.65■□□□□ 0.42
TUBB3-202ENST00000553656 ANKRD36CQ5JPF3 1778 aa17.64■□□□□ 0.41
TUBB3-202ENST00000553656 PPP1R42Q7Z4L9 355 aa17.64■□□□□ 0.41
TUBB3-202ENST00000553656 MYD88Q99836 296 aa17.64■□□□□ 0.41
TUBB3-202ENST00000553656 C10orf71Q711Q0 1435 aa17.64■□□□□ 0.41
TUBB3-202ENST00000553656 RARSP54136 660 aaKnown RBP17.63■□□□□ 0.41
TUBB3-202ENST00000553656 METTL22Q9BUU2 404 aaPredicted RBP17.63■□□□□ 0.41
TUBB3-202ENST00000553656 PTPRCP08575 1304 aa17.63■□□□□ 0.41
TUBB3-202ENST00000553656 UBN2Q6ZU65 1347 aa17.63■□□□□ 0.41
TUBB3-202ENST00000553656 ADCY9O60503 1353 aa17.63■□□□□ 0.41
TUBB3-202ENST00000553656 IBTKQ9P2D0 1353 aaPredicted RBP17.63■□□□□ 0.41
TUBB3-202ENST00000553656 ATP5J2-PTCD1G3V325 749 aa17.62■□□□□ 0.41
TUBB3-202ENST00000553656 PRR5LQ6MZQ0 368 aa17.62■□□□□ 0.41
TUBB3-202ENST00000553656 DNAAF4Q8WXU2 420 aa17.62■□□□□ 0.41
TUBB3-202ENST00000553656 SYT17Q9BSW7 474 aa17.62■□□□□ 0.41
TUBB3-202ENST00000553656 UTP14AQ9BVJ6 771 aaKnown RBP17.62■□□□□ 0.41
TUBB3-202ENST00000553656 AFDNP55196 1824 aaKnown RBP17.62■□□□□ 0.41
TUBB3-202ENST00000553656 NRXN2Q9P2S2 1712 aa17.61■□□□□ 0.41
TUBB3-202ENST00000553656 SUSD4Q5VX71 490 aa17.61■□□□□ 0.41
TUBB3-202ENST00000553656 NLRP10Q86W26 655 aa17.61■□□□□ 0.41
TUBB3-202ENST00000553656 ISCA1Q9BUE6 129 aa17.61■□□□□ 0.41
TUBB3-202ENST00000553656 KIF16BQ96L93 1317 aa17.61■□□□□ 0.41
TUBB3-202ENST00000553656 TRMT112Q9UI30 125 aaKnown RBP17.6■□□□□ 0.41
TUBB3-202ENST00000553656 RNF123Q5XPI4 1314 aa17.6■□□□□ 0.41
TUBB3-202ENST00000553656 TGFB2P61812 414 aa17.59■□□□□ 0.41
TUBB3-202ENST00000553656 TRIM28Q13263 835 aaKnown RBP17.59■□□□□ 0.41
TUBB3-202ENST00000553656 CCDC24Q8N4L8 307 aa17.59■□□□□ 0.41
TUBB3-202ENST00000553656 CCDC191Q8NCU4 936 aa17.59■□□□□ 0.41
TUBB3-202ENST00000553656 BRIP1Q9BX63 1249 aa17.59■□□□□ 0.41
TUBB3-202ENST00000553656 CWC25Q9NXE8 425 aaPredicted RBP17.59■□□□□ 0.41
TUBB3-202ENST00000553656 SH3TC1Q8TE82 1336 aa17.58■□□□□ 0.4
TUBB3-202ENST00000553656 F6X3S4 739 aa17.58■□□□□ 0.4
TUBB3-202ENST00000553656 NTSR2O95665 410 aa17.58■□□□□ 0.4
TUBB3-202ENST00000553656 PDE6BP35913 854 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms