RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 CYP19A1P11511 503 aaPredicted RBP17.37■□□□□ 0.37
SNRPF-204ENST00000552085 MTHFSP49914 203 aa17.37■□□□□ 0.37
SNRPF-204ENST00000552085 PLEKHO1Q53GL0 409 aaPredicted RBP17.37■□□□□ 0.37
SNRPF-204ENST00000552085 ZNF530Q6P9A1 599 aaPredicted RBP17.37■□□□□ 0.37
SNRPF-204ENST00000552085 CCDC24Q8N4L8 307 aa17.37■□□□□ 0.37
SNRPF-204ENST00000552085 TESK2Q96S53 571 aa17.37■□□□□ 0.37
SNRPF-204ENST00000552085 SIN3AQ96ST3 1273 aa17.37■□□□□ 0.37
SNRPF-204ENST00000552085 PRR5LQ6MZQ0 368 aa17.36■□□□□ 0.37
SNRPF-204ENST00000552085 ZBTB1Q9Y2K1 713 aa17.36■□□□□ 0.37
SNRPF-204ENST00000552085 CCDC93Q567U6 631 aa17.35■□□□□ 0.37
SNRPF-204ENST00000552085 GPC2Q8N158 579 aa17.35■□□□□ 0.37
SNRPF-204ENST00000552085 ZNF277Q9NRM2 450 aaPredicted RBP17.35■□□□□ 0.37
SNRPF-204ENST00000552085 SCN7AQ01118 1682 aa17.35■□□□□ 0.37
SNRPF-204ENST00000552085 FZD9O00144 591 aa17.34■□□□□ 0.37
SNRPF-204ENST00000552085 SRGNP10124 158 aa17.34■□□□□ 0.37
SNRPF-204ENST00000552085 FKBP4Q02790 459 aaKnown RBP eCLIP17.34■□□□□ 0.37
SNRPF-204ENST00000552085 TBC1D9BQ66K14 1250 aa17.34■□□□□ 0.37
SNRPF-204ENST00000552085 MASTLQ96GX5 879 aa17.34■□□□□ 0.37
SNRPF-204ENST00000552085 TRAF5O00463 557 aa17.33■□□□□ 0.36
SNRPF-204ENST00000552085 SLC24A1O60721 1099 aa17.33■□□□□ 0.36
SNRPF-204ENST00000552085 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
SNRPF-204ENST00000552085 EIF4A2Q14240 407 aaKnown RBP17.33■□□□□ 0.36
SNRPF-204ENST00000552085 AMOTQ4VCS5 1084 aa17.33■□□□□ 0.36
SNRPF-204ENST00000552085 CIAPIN1Q6FI81 312 aa17.33■□□□□ 0.36
SNRPF-204ENST00000552085 C7orf43Q8WVR3 580 aa17.33■□□□□ 0.36
SNRPF-204ENST00000552085 BCORQ6W2J9 1755 aa17.33■□□□□ 0.36
SNRPF-204ENST00000552085 C1orf141Q5JVX7 400 aa17.32■□□□□ 0.36
SNRPF-204ENST00000552085 SAPCD2Q86UD0 394 aa17.32■□□□□ 0.36
SNRPF-204ENST00000552085 HHIPL1Q96JK4 782 aa17.32■□□□□ 0.36
SNRPF-204ENST00000552085 NBPF15Q8N660 670 aa17.31■□□□□ 0.36
SNRPF-204ENST00000552085 LMOD1P29536 600 aaPredicted RBP17.3■□□□□ 0.36
SNRPF-204ENST00000552085 HABP4Q5JVS0 413 aaKnown RBP17.3■□□□□ 0.36
SNRPF-204ENST00000552085 CANXP27824 592 aaKnown RBP17.29■□□□□ 0.36
SNRPF-204ENST00000552085 IARSP41252 1262 aaKnown RBP17.29■□□□□ 0.36
SNRPF-204ENST00000552085 CNBD1Q8NA66 436 aa17.29■□□□□ 0.36
SNRPF-204ENST00000552085 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
SNRPF-204ENST00000552085 AKAP11Q9UKA4 1901 aa17.28■□□□□ 0.36
SNRPF-204ENST00000552085 A0A087WZG4 1122 aa17.28■□□□□ 0.36
SNRPF-204ENST00000552085 NPHP1O15259 732 aa17.28■□□□□ 0.36
SNRPF-204ENST00000552085 ST5P78524 1137 aa17.28■□□□□ 0.36
SNRPF-204ENST00000552085 RTKN2Q8IZC4 609 aa17.28■□□□□ 0.36
SNRPF-204ENST00000552085 CELF2O95319 508 aaKnown RBP17.27■□□□□ 0.36
SNRPF-204ENST00000552085 EPS15P42566 896 aa17.27■□□□□ 0.36
SNRPF-204ENST00000552085 EIF5P55010 431 aaKnown RBP17.27■□□□□ 0.36
SNRPF-204ENST00000552085 USP50Q70EL3 339 aaPredicted RBP17.27■□□□□ 0.36
SNRPF-204ENST00000552085 GJA3Q9Y6H8 435 aa17.27■□□□□ 0.36
SNRPF-204ENST00000552085 CARD14Q9BXL6 1004 aa17.26■□□□□ 0.35
SNRPF-204ENST00000552085 SCNN1DP51172 638 aa17.25■□□□□ 0.35
SNRPF-204ENST00000552085 EIF6P56537 245 aaKnown RBP17.25■□□□□ 0.35
SNRPF-204ENST00000552085 NOGQ13253 232 aa17.25■□□□□ 0.35
SNRPF-204ENST00000552085 SYNE4Q8N205 404 aa17.25■□□□□ 0.35
SNRPF-204ENST00000552085 JDP2Q8WYK2 163 aa17.25■□□□□ 0.35
SNRPF-204ENST00000552085 UBR2Q8IWV8 1755 aa17.25■□□□□ 0.35
SNRPF-204ENST00000552085 SLC39A6Q13433 755 aa17.24■□□□□ 0.35
SNRPF-204ENST00000552085 OLFM4Q6UX06 510 aa17.24■□□□□ 0.35
SNRPF-204ENST00000552085 VSIG10Q8N0Z9 540 aa17.24■□□□□ 0.35
SNRPF-204ENST00000552085 ZIC5Q96T25 663 aa17.24■□□□□ 0.35
SNRPF-204ENST00000552085 SETDB2Q96T68 719 aa17.24■□□□□ 0.35
SNRPF-204ENST00000552085 SLC52A2Q9HAB3 445 aa17.24■□□□□ 0.35
SNRPF-204ENST00000552085 SAGE1Q9NXZ1 904 aa17.24■□□□□ 0.35
SNRPF-204ENST00000552085 NPR1P16066 1061 aa17.23■□□□□ 0.35
SNRPF-204ENST00000552085 CTU1Q7Z7A3 348 aaKnown RBP17.22■□□□□ 0.35
SNRPF-204ENST00000552085 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
SNRPF-204ENST00000552085 MRC1P22897 1456 aa17.22■□□□□ 0.35
SNRPF-204ENST00000552085 COL4A5P29400 1685 aa17.22■□□□□ 0.35
SNRPF-204ENST00000552085 AKAP4Q5JQC9 854 aa17.2■□□□□ 0.34
SNRPF-204ENST00000552085 ZNF408Q9H9D4 720 aa17.2■□□□□ 0.34
SNRPF-204ENST00000552085 HPS5Q9UPZ3 1129 aa17.2■□□□□ 0.34
SNRPF-204ENST00000552085 STARD3NLO95772 234 aa17.19■□□□□ 0.34
SNRPF-204ENST00000552085 AEBP1Q8IUX7 1158 aa17.19■□□□□ 0.34
SNRPF-204ENST00000552085 PSMD1Q99460 953 aa17.19■□□□□ 0.34
SNRPF-204ENST00000552085 GLIS2Q9BZE0 524 aaPredicted RBP17.19■□□□□ 0.34
SNRPF-204ENST00000552085 FXR1P51114 621 aaKnown RBP eCLIP17.18■□□□□ 0.34
SNRPF-204ENST00000552085 LGR6Q9HBX8 967 aa17.18■□□□□ 0.34
SNRPF-204ENST00000552085 ADARB2Q9NS39 739 aaKnown RBP17.18■□□□□ 0.34
SNRPF-204ENST00000552085 ZNF330Q9Y3S2 320 aaPredicted RBP17.18■□□□□ 0.34
SNRPF-204ENST00000552085 SNED1Q8TER0 1413 aa17.18■□□□□ 0.34
SNRPF-204ENST00000552085 KLRG2A4D1S0 409 aaPredicted RBP17.17■□□□□ 0.34
SNRPF-204ENST00000552085 TRPA1O75762 1119 aa17.17■□□□□ 0.34
SNRPF-204ENST00000552085 RNF186Q9NXI6 227 aa17.17■□□□□ 0.34
SNRPF-204ENST00000552085 CAMTA2O94983 1202 aa17.16■□□□□ 0.34
SNRPF-204ENST00000552085 TNNT2P45379 298 aaPredicted RBP17.15■□□□□ 0.34
SNRPF-204ENST00000552085 HUNKP57058 714 aa17.15■□□□□ 0.34
SNRPF-204ENST00000552085 NBPF5PQ86XG9 351 aaPredicted RBP17.15■□□□□ 0.34
SNRPF-204ENST00000552085 GPRC5DQ9NZD1 345 aa17.15■□□□□ 0.34
SNRPF-204ENST00000552085 PGAP2Q9UHJ9 254 aa17.15■□□□□ 0.34
SNRPF-204ENST00000552085 FAM155AB1AL88 458 aaPredicted RBP17.14■□□□□ 0.33
SNRPF-204ENST00000552085 RNMTO43148 476 aaKnown RBP17.14■□□□□ 0.33
SNRPF-204ENST00000552085 ALDH1B1P30837 517 aa17.14■□□□□ 0.33
SNRPF-204ENST00000552085 IL6STP40189 918 aaPredicted RBP17.14■□□□□ 0.33
SNRPF-204ENST00000552085 PKN2Q16513 984 aaKnown RBP17.14■□□□□ 0.33
SNRPF-204ENST00000552085 CDCA8Q53HL2 280 aa17.14■□□□□ 0.33
SNRPF-204ENST00000552085 DLL1O00548 723 aa17.13■□□□□ 0.33
SNRPF-204ENST00000552085 KIF23Q02241 960 aaPredicted RBP17.13■□□□□ 0.33
SNRPF-204ENST00000552085 SULT6B1Q6IMI4 303 aa17.13■□□□□ 0.33
SNRPF-204ENST00000552085 RGMBQ6NW40 437 aa17.13■□□□□ 0.33
SNRPF-204ENST00000552085 LARGE2Q8N3Y3 721 aa17.13■□□□□ 0.33
SNRPF-204ENST00000552085 CDC37L1Q7L3B6 337 aa17.12■□□□□ 0.33
SNRPF-204ENST00000552085 NPM2Q86SE8 214 aaKnown RBP17.12■□□□□ 0.33
SNRPF-204ENST00000552085 ZC3H15Q8WU90 426 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms