RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 TWISTNBQ3B726 338 aaPredicted RBP22.56■■□□□ 1.2
CDK4-207ENST00000550419 KIF6Q6ZMV9 814 aa22.56■■□□□ 1.2
CDK4-207ENST00000550419 NECTIN2Q92692 538 aa22.56■■□□□ 1.2
CDK4-207ENST00000550419 HYPKQ9NX55 129 aa22.56■■□□□ 1.2
CDK4-207ENST00000550419 MAP3K15Q6ZN16 1313 aa22.56■■□□□ 1.2
CDK4-207ENST00000550419 CCDC30Q5VVM6 783 aa22.55■■□□□ 1.2
CDK4-207ENST00000550419 TTLL7Q6ZT98 887 aa22.55■■□□□ 1.2
CDK4-207ENST00000550419 TBC1D9BQ66K14 1250 aa22.54■■□□□ 1.2
CDK4-207ENST00000550419 CARMIL3Q8ND23 1372 aa22.53■■□□□ 1.2
CDK4-207ENST00000550419 ANXA1P04083 346 aa22.53■■□□□ 1.2
CDK4-207ENST00000550419 EXOSC9Q06265 439 aaKnown RBP22.53■■□□□ 1.2
CDK4-207ENST00000550419 C10orf71Q711Q0 1435 aa22.53■■□□□ 1.2
CDK4-207ENST00000550419 NRXN2Q9P2S2 1712 aa22.53■■□□□ 1.2
CDK4-207ENST00000550419 ATP10DQ9P241 1426 aa22.52■■□□□ 1.2
CDK4-207ENST00000550419 SLFN5Q08AF3 891 aa22.52■■□□□ 1.2
CDK4-207ENST00000550419 COPS6Q7L5N1 327 aa22.52■■□□□ 1.2
CDK4-207ENST00000550419 SETDB2Q96T68 719 aa22.52■■□□□ 1.2
CDK4-207ENST00000550419 VAMP4O75379 141 aa22.51■■□□□ 1.19
CDK4-207ENST00000550419 SERPINB2P05120 415 aa22.51■■□□□ 1.19
CDK4-207ENST00000550419 HLFQ16534 295 aa22.51■■□□□ 1.19
CDK4-207ENST00000550419 GIGYF2Q6Y7W6 1299 aaKnown RBP22.51■■□□□ 1.19
CDK4-207ENST00000550419 TRMT2AQ8IZ69 625 aaKnown RBP22.51■■□□□ 1.19
CDK4-207ENST00000550419 XAGE3Q8WTP9 111 aa22.51■■□□□ 1.19
CDK4-207ENST00000550419 KIF13BQ9NQT8 1826 aa22.51■■□□□ 1.19
CDK4-207ENST00000550419 BICDL1Q6ZP65 573 aa22.49■■□□□ 1.19
CDK4-207ENST00000550419 STK31Q9BXU1 1019 aa22.49■■□□□ 1.19
CDK4-207ENST00000550419 ZBTB3Q9H5J0 574 aa22.49■■□□□ 1.19
CDK4-207ENST00000550419 TGFB2P61812 414 aa22.48■■□□□ 1.19
CDK4-207ENST00000550419 KLHL34Q8N239 644 aa22.48■■□□□ 1.19
CDK4-207ENST00000550419 PLBD2Q8NHP8 589 aa22.48■■□□□ 1.19
CDK4-207ENST00000550419 NIP7Q9Y221 180 aaKnown RBP eCLIP22.48■■□□□ 1.19
CDK4-207ENST00000550419 HNRNPUQ00839 825 aaKnown RBP eCLIP22.47■■□□□ 1.19
CDK4-207ENST00000550419 AIMP1Q12904 312 aaKnown RBP22.47■■□□□ 1.19
CDK4-207ENST00000550419 ANKRD13DQ6ZTN6 518 aa22.47■■□□□ 1.19
CDK4-207ENST00000550419 NUP98P52948 1817 aa22.47■■□□□ 1.19
CDK4-207ENST00000550419 AFDNP55196 1824 aaKnown RBP22.47■■□□□ 1.19
CDK4-207ENST00000550419 HSP90AB3PQ58FF7 597 aa22.46■■□□□ 1.19
CDK4-207ENST00000550419 ZNF34Q8IZ26 560 aa22.46■■□□□ 1.19
CDK4-207ENST00000550419 NLGN2Q8NFZ4 835 aa22.46■■□□□ 1.19
CDK4-207ENST00000550419 CDCA7LQ96GN5 454 aa22.46■■□□□ 1.19
CDK4-207ENST00000550419 IBTKQ9P2D0 1353 aaPredicted RBP22.45■■□□□ 1.18
CDK4-207ENST00000550419 PARP10Q53GL7 1025 aa22.44■■□□□ 1.18
CDK4-207ENST00000550419 PRR5LQ6MZQ0 368 aa22.44■■□□□ 1.18
CDK4-207ENST00000550419 TPTE2Q6XPS3 522 aa22.44■■□□□ 1.18
CDK4-207ENST00000550419 CNBD1Q8NA66 436 aa22.44■■□□□ 1.18
CDK4-207ENST00000550419 ZNF428Q96B54 188 aa22.44■■□□□ 1.18
CDK4-207ENST00000550419 PHAXQ9H814 394 aaKnown RBP22.44■■□□□ 1.18
CDK4-207ENST00000550419 PXDNLA1KZ92 1463 aa22.43■■□□□ 1.18
CDK4-207ENST00000550419 DDX58O95786 925 aaKnown RBP22.43■■□□□ 1.18
CDK4-207ENST00000550419 SLC4A2P04920 1241 aa22.43■■□□□ 1.18
CDK4-207ENST00000550419 NBPF5PQ86XG9 351 aaPredicted RBP22.43■■□□□ 1.18
CDK4-207ENST00000550419 CT47B1P0C2W7 299 aaPredicted RBP22.42■■□□□ 1.18
CDK4-207ENST00000550419 TCIRG1Q13488 830 aa22.42■■□□□ 1.18
CDK4-207ENST00000550419 BRIP1Q9BX63 1249 aa22.42■■□□□ 1.18
CDK4-207ENST00000550419 NYXQ9GZU5 481 aa22.42■■□□□ 1.18
CDK4-207ENST00000550419 PDZRN3Q9UPQ7 1066 aa22.42■■□□□ 1.18
CDK4-207ENST00000550419 KIAA1551Q9HCM1 1747 aa22.42■■□□□ 1.18
CDK4-207ENST00000550419 CACNA1FO60840 1977 aa22.41■■□□□ 1.18
CDK4-207ENST00000550419 ZBED9Q6R2W3 1325 aa22.41■■□□□ 1.18
CDK4-207ENST00000550419 UBN2Q6ZU65 1347 aa22.41■■□□□ 1.18
CDK4-207ENST00000550419 RNF123Q5XPI4 1314 aa22.4■■□□□ 1.18
CDK4-207ENST00000550419 ST5P78524 1137 aa22.4■■□□□ 1.18
CDK4-207ENST00000550419 TRIM28Q13263 835 aaKnown RBP22.4■■□□□ 1.18
CDK4-207ENST00000550419 ANKRD36CQ5JPF3 1778 aa22.4■■□□□ 1.18
CDK4-207ENST00000550419 DCAF8L1A6NGE4 600 aa22.39■■□□□ 1.17
CDK4-207ENST00000550419 GPTP24298 496 aa22.39■■□□□ 1.17
CDK4-207ENST00000550419 RIC3Q7Z5B4 369 aa22.39■■□□□ 1.17
CDK4-207ENST00000550419 TCERG1O14776 1098 aaKnown RBP22.38■■□□□ 1.17
CDK4-207ENST00000550419 NPHP1O15259 732 aa22.38■■□□□ 1.17
CDK4-207ENST00000550419 PDE6BP35913 854 aa22.38■■□□□ 1.17
CDK4-207ENST00000550419 KSR2Q6VAB6 950 aa22.38■■□□□ 1.17
CDK4-207ENST00000550419 PPP1R42Q7Z4L9 355 aa22.38■■□□□ 1.17
CDK4-207ENST00000550419 ISCA1Q9BUE6 129 aa22.38■■□□□ 1.17
CDK4-207ENST00000550419 RIC1Q4ADV7 1423 aa22.38■■□□□ 1.17
CDK4-207ENST00000550419 ARFGEF2Q9Y6D5 1785 aa22.38■■□□□ 1.17
CDK4-207ENST00000550419 A0A0G2JLW4 131 aa22.37■■□□□ 1.17
CDK4-207ENST00000550419 DPEP1P16444 411 aa22.37■■□□□ 1.17
CDK4-207ENST00000550419 KCNA3P22001 575 aa22.37■■□□□ 1.17
CDK4-207ENST00000550419 FLIIQ13045 1269 aa22.37■■□□□ 1.17
CDK4-207ENST00000550419 SUSD4Q5VX71 490 aa22.37■■□□□ 1.17
CDK4-207ENST00000550419 NLRP10Q86W26 655 aa22.37■■□□□ 1.17
CDK4-207ENST00000550419 KLRG2A4D1S0 409 aaPredicted RBP22.36■■□□□ 1.17
CDK4-207ENST00000550419 NTSR2O95665 410 aa22.36■■□□□ 1.17
CDK4-207ENST00000550419 G2E3Q7L622 706 aa22.36■■□□□ 1.17
CDK4-207ENST00000550419 ANKRD31Q8N7Z5 1873 aa22.35■■□□□ 1.17
CDK4-207ENST00000550419 PI4KAP2A4QPH2 592 aa22.35■■□□□ 1.17
CDK4-207ENST00000550419 GTF2E1P29083 439 aaPredicted RBP22.35■■□□□ 1.17
CDK4-207ENST00000550419 PI4KAP1Q8N8J0 262 aa22.35■■□□□ 1.17
CDK4-207ENST00000550419 METTL22Q9BUU2 404 aaPredicted RBP22.35■■□□□ 1.17
CDK4-207ENST00000550419 UTP14AQ9BVJ6 771 aaKnown RBP22.35■■□□□ 1.17
CDK4-207ENST00000550419 ADCY9O60503 1353 aa22.35■■□□□ 1.17
CDK4-207ENST00000550419 H0YIN7 160 aa22.34■■□□□ 1.17
CDK4-207ENST00000550419 ALDH1L2Q3SY69 923 aa22.34■■□□□ 1.17
CDK4-207ENST00000550419 PIM2Q9P1W9 311 aa22.34■■□□□ 1.17
CDK4-207ENST00000550419 MAP3K2Q9Y2U5 619 aa22.34■■□□□ 1.17
CDK4-207ENST00000550419 N4BP2Q86UW6 1770 aaPredicted RBP22.34■■□□□ 1.17
CDK4-207ENST00000550419 FAM177BA6PVY3 158 aa22.33■■□□□ 1.17
CDK4-207ENST00000550419 CHRNA5P30532 468 aa22.33■■□□□ 1.17
CDK4-207ENST00000550419 SLC10A5Q5PT55 438 aa22.33■■□□□ 1.17
CDK4-207ENST00000550419 BRCA1P38398 1863 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms