RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 POLRMTO00411 1230 aaKnown RBP15.41■□□□□ 0.06
PFDN5-208ENST00000549995 SLFN5Q08AF3 891 aa15.41■□□□□ 0.06
PFDN5-208ENST00000549995 CHPF2Q9P2E5 772 aa15.41■□□□□ 0.06
PFDN5-208ENST00000549995 TBC1D2BQ9UPU7 963 aa15.41■□□□□ 0.06
PFDN5-208ENST00000549995 SALL2Q9Y467 1007 aaPredicted RBP15.41■□□□□ 0.06
PFDN5-208ENST00000549995 CARMIL3Q8ND23 1372 aa15.4■□□□□ 0.06
PFDN5-208ENST00000549995 EIF2S2P20042 333 aaKnown RBP15.4■□□□□ 0.06
PFDN5-208ENST00000549995 NFIXQ14938 502 aa15.4■□□□□ 0.06
PFDN5-208ENST00000549995 TWISTNBQ3B726 338 aaPredicted RBP15.4■□□□□ 0.06
PFDN5-208ENST00000549995 CD2APQ9Y5K6 639 aa15.4■□□□□ 0.06
PFDN5-208ENST00000549995 LAMB2P55268 1798 aa15.39■□□□□ 0.05
PFDN5-208ENST00000549995 VAMP4O75379 141 aa15.39■□□□□ 0.05
PFDN5-208ENST00000549995 TTLL7Q6ZT98 887 aa15.39■□□□□ 0.05
PFDN5-208ENST00000549995 HYPKQ9NX55 129 aa15.39■□□□□ 0.05
PFDN5-208ENST00000549995 ZNF652Q9Y2D9 606 aa15.39■□□□□ 0.05
PFDN5-208ENST00000549995 RIC1Q4ADV7 1423 aa15.39■□□□□ 0.05
PFDN5-208ENST00000549995 COL11A2P13942 1736 aaPredicted RBP15.39■□□□□ 0.05
PFDN5-208ENST00000549995 N4BP2Q86UW6 1770 aaPredicted RBP15.39■□□□□ 0.05
PFDN5-208ENST00000549995 MYL6BP14649 208 aa15.38■□□□□ 0.05
PFDN5-208ENST00000549995 EXOSC9Q06265 439 aaKnown RBP15.38■□□□□ 0.05
PFDN5-208ENST00000549995 CCDC30Q5VVM6 783 aa15.38■□□□□ 0.05
PFDN5-208ENST00000549995 NPM2Q86SE8 214 aaKnown RBP15.38■□□□□ 0.05
PFDN5-208ENST00000549995 SYT17Q9BSW7 474 aa15.38■□□□□ 0.05
PFDN5-208ENST00000549995 FHDC1Q9C0D6 1143 aaPredicted RBP15.38■□□□□ 0.05
PFDN5-208ENST00000549995 PPP1R1BQ9UD71 204 aaPredicted RBP15.38■□□□□ 0.05
PFDN5-208ENST00000549995 PXDNLA1KZ92 1463 aa15.38■□□□□ 0.05
PFDN5-208ENST00000549995 TBC1D9BQ66K14 1250 aa15.37■□□□□ 0.05
PFDN5-208ENST00000549995 GIGYF2Q6Y7W6 1299 aaKnown RBP15.37■□□□□ 0.05
PFDN5-208ENST00000549995 KIF6Q6ZMV9 814 aa15.37■□□□□ 0.05
PFDN5-208ENST00000549995 PARP3Q9Y6F1 533 aa15.37■□□□□ 0.05
PFDN5-208ENST00000549995 ARFGEF1Q9Y6D6 1849 aa15.37■□□□□ 0.05
PFDN5-208ENST00000549995 ZBED9Q6R2W3 1325 aa15.37■□□□□ 0.05
PFDN5-208ENST00000549995 ANXA1P04083 346 aa15.36■□□□□ 0.05
PFDN5-208ENST00000549995 HLFQ16534 295 aa15.36■□□□□ 0.05
PFDN5-208ENST00000549995 COPS6Q7L5N1 327 aa15.36■□□□□ 0.05
PFDN5-208ENST00000549995 ZNF34Q8IZ26 560 aa15.36■□□□□ 0.05
PFDN5-208ENST00000549995 ZNF330Q9Y3S2 320 aaPredicted RBP15.36■□□□□ 0.05
PFDN5-208ENST00000549995 TNRC6CQ9HCJ0 1690 aaKnown RBP15.35■□□□□ 0.05
PFDN5-208ENST00000549995 ELL2O00472 640 aaPredicted RBP15.35■□□□□ 0.05
PFDN5-208ENST00000549995 XAGE3Q8WTP9 111 aa15.35■□□□□ 0.05
PFDN5-208ENST00000549995 ZNF428Q96B54 188 aa15.35■□□□□ 0.05
PFDN5-208ENST00000549995 DDX60Q8IY21 1712 aaKnown RBP15.34■□□□□ 0.05
PFDN5-208ENST00000549995 SERPINB2P05120 415 aa15.34■□□□□ 0.05
PFDN5-208ENST00000549995 CT47B1P0C2W7 299 aaPredicted RBP15.34■□□□□ 0.05
PFDN5-208ENST00000549995 PLBD2Q8NHP8 589 aa15.34■□□□□ 0.05
PFDN5-208ENST00000549995 NECTIN2Q92692 538 aa15.34■□□□□ 0.05
PFDN5-208ENST00000549995 CDCA7LQ96GN5 454 aa15.34■□□□□ 0.05
PFDN5-208ENST00000549995 TGFB2P61812 414 aa15.33■□□□□ 0.04
PFDN5-208ENST00000549995 HSP90AB3PQ58FF7 597 aa15.33■□□□□ 0.04
PFDN5-208ENST00000549995 SETDB2Q96T68 719 aa15.33■□□□□ 0.04
PFDN5-208ENST00000549995 RNF123Q5XPI4 1314 aa15.33■□□□□ 0.04
PFDN5-208ENST00000549995 UBN2Q6ZU65 1347 aa15.33■□□□□ 0.04
PFDN5-208ENST00000549995 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.04
PFDN5-208ENST00000549995 PRR5LQ6MZQ0 368 aa15.32■□□□□ 0.04
PFDN5-208ENST00000549995 ANKRD13DQ6ZTN6 518 aa15.32■□□□□ 0.04
PFDN5-208ENST00000549995 NLGN2Q8NFZ4 835 aa15.32■□□□□ 0.04
PFDN5-208ENST00000549995 ZBTB3Q9H5J0 574 aa15.32■□□□□ 0.04
PFDN5-208ENST00000549995 PHAXQ9H814 394 aaKnown RBP15.32■□□□□ 0.04
PFDN5-208ENST00000549995 TRIM28Q13263 835 aaKnown RBP15.31■□□□□ 0.04
PFDN5-208ENST00000549995 PARP10Q53GL7 1025 aa15.31■□□□□ 0.04
PFDN5-208ENST00000549995 ISCA1Q9BUE6 129 aa15.31■□□□□ 0.04
PFDN5-208ENST00000549995 STK31Q9BXU1 1019 aa15.31■□□□□ 0.04
PFDN5-208ENST00000549995 NIP7Q9Y221 180 aaKnown RBP eCLIP15.31■□□□□ 0.04
PFDN5-208ENST00000549995 ADCY9O60503 1353 aa15.31■□□□□ 0.04
PFDN5-208ENST00000549995 KLRG2A4D1S0 409 aaPredicted RBP15.3■□□□□ 0.04
PFDN5-208ENST00000549995 TCIRG1Q13488 830 aa15.3■□□□□ 0.04
PFDN5-208ENST00000549995 PDZRN3Q9UPQ7 1066 aa15.3■□□□□ 0.04
PFDN5-208ENST00000549995 NTSR2O95665 410 aa15.29■□□□□ 0.04
PFDN5-208ENST00000549995 BRPF1P55201 1214 aaPredicted RBP15.29■□□□□ 0.04
PFDN5-208ENST00000549995 ALDH1L2Q3SY69 923 aa15.29■□□□□ 0.04
PFDN5-208ENST00000549995 BRIP1Q9BX63 1249 aa15.29■□□□□ 0.04
PFDN5-208ENST00000549995 NYXQ9GZU5 481 aa15.29■□□□□ 0.04
PFDN5-208ENST00000549995 DDX58O95786 925 aaKnown RBP15.28■□□□□ 0.04
PFDN5-208ENST00000549995 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
PFDN5-208ENST00000549995 KCNA3P22001 575 aa15.28■□□□□ 0.04
PFDN5-208ENST00000549995 AIMP1Q12904 312 aaKnown RBP15.28■□□□□ 0.04
PFDN5-208ENST00000549995 FLIIQ13045 1269 aa15.28■□□□□ 0.04
PFDN5-208ENST00000549995 BICDL1Q6ZP65 573 aa15.28■□□□□ 0.04
PFDN5-208ENST00000549995 G2E3Q7L622 706 aa15.28■□□□□ 0.04
PFDN5-208ENST00000549995 NLRP10Q86W26 655 aa15.28■□□□□ 0.04
PFDN5-208ENST00000549995 CNBD1Q8NA66 436 aa15.28■□□□□ 0.04
PFDN5-208ENST00000549995 CACNA1SQ13698 1873 aa15.27■□□□□ 0.04
PFDN5-208ENST00000549995 ABCC12Q96J65 1359 aa15.27■□□□□ 0.04
PFDN5-208ENST00000549995 KSR2Q6VAB6 950 aa15.27■□□□□ 0.04
PFDN5-208ENST00000549995 TPTE2Q6XPS3 522 aa15.27■□□□□ 0.04
PFDN5-208ENST00000549995 NBPF5PQ86XG9 351 aaPredicted RBP15.27■□□□□ 0.04
PFDN5-208ENST00000549995 MYH3P11055 1940 aa15.27■□□□□ 0.03
PFDN5-208ENST00000549995 CHD4Q14839 1912 aa15.26■□□□□ 0.03
PFDN5-208ENST00000549995 ST5P78524 1137 aa15.26■□□□□ 0.03
PFDN5-208ENST00000549995 SUSD4Q5VX71 490 aa15.26■□□□□ 0.03
PFDN5-208ENST00000549995 PPP1R42Q7Z4L9 355 aa15.26■□□□□ 0.03
PFDN5-208ENST00000549995 METTL22Q9BUU2 404 aaPredicted RBP15.26■□□□□ 0.03
PFDN5-208ENST00000549995 PDE6BP35913 854 aa15.25■□□□□ 0.03
PFDN5-208ENST00000549995 SLC10A5Q5PT55 438 aa15.25■□□□□ 0.03
PFDN5-208ENST00000549995 MRPL50Q8N5N7 158 aaKnown RBP15.25■□□□□ 0.03
PFDN5-208ENST00000549995 LRRC37AA6NMS7 1700 aa15.24■□□□□ 0.03
PFDN5-208ENST00000549995 PI4KAP2A4QPH2 592 aa15.24■□□□□ 0.03
PFDN5-208ENST00000549995 DPEP1P16444 411 aa15.24■□□□□ 0.03
PFDN5-208ENST00000549995 GPTP24298 496 aa15.24■□□□□ 0.03
PFDN5-208ENST00000549995 CRY2Q49AN0 593 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms