RNA–Protein interactions for RNA: ENST00000549633.5

SLC38A1-207, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best)

Gene SLC38A1, Length 1,076 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-207ENST00000549633 NPHP1O15259 732 aa28.26■■■□□ 2.11
SLC38A1-207ENST00000549633 TEX13AQ9BXU3 409 aaPredicted RBP28.26■■■□□ 2.11
SLC38A1-207ENST00000549633 SRGNP10124 158 aa28.25■■■□□ 2.11
SLC38A1-207ENST00000549633 FMNL2Q96PY5 1086 aa28.25■■■□□ 2.11
SLC38A1-207ENST00000549633 CREBZFQ9NS37 354 aa28.25■■■□□ 2.11
SLC38A1-207ENST00000549633 STYK1Q6J9G0 422 aa28.24■■■□□ 2.11
SLC38A1-207ENST00000549633 CNKSR1Q969H4 720 aa28.24■■■□□ 2.11
SLC38A1-207ENST00000549633 ST5P78524 1137 aa28.23■■■□□ 2.11
SLC38A1-207ENST00000549633 DZIP3Q86Y13 1208 aaKnown RBP28.23■■■□□ 2.11
SLC38A1-207ENST00000549633 GAS2L2Q8NHY3 880 aa28.23■■■□□ 2.11
SLC38A1-207ENST00000549633 PRAMEF22A3QJZ6 481 aa28.21■■■□□ 2.11
SLC38A1-207ENST00000549633 NPM2Q86SE8 214 aaKnown RBP28.21■■■□□ 2.11
SLC38A1-207ENST00000549633 MASTLQ96GX5 879 aa28.21■■■□□ 2.11
SLC38A1-207ENST00000549633 USP16Q9Y5T5 823 aa28.21■■■□□ 2.11
SLC38A1-207ENST00000549633 CEMIPQ8WUJ3 1361 aa28.2■■■□□ 2.1
SLC38A1-207ENST00000549633 BTBD11A6QL63 1104 aa28.19■■■□□ 2.1
SLC38A1-207ENST00000549633 PHACTR3Q96KR7 559 aa28.19■■■□□ 2.1
SLC38A1-207ENST00000549633 SCN4AP35499 1836 aa28.19■■■□□ 2.1
SLC38A1-207ENST00000549633 FOXN1O15353 648 aa28.18■■■□□ 2.1
SLC38A1-207ENST00000549633 OLFM4Q6UX06 510 aa28.18■■■□□ 2.1
SLC38A1-207ENST00000549633 CNTNAP1P78357 1384 aa28.17■■■□□ 2.1
SLC38A1-207ENST00000549633 C7orf43Q8WVR3 580 aa28.17■■■□□ 2.1
SLC38A1-207ENST00000549633 PASKQ96RG2 1323 aa28.17■■■□□ 2.1
SLC38A1-207ENST00000549633 ZNF541Q9H0D2 1346 aa28.17■■■□□ 2.1
SLC38A1-207ENST00000549633 SOGA3Q5TF21 947 aa28.16■■■□□ 2.1
SLC38A1-207ENST00000549633 NBPF5PQ86XG9 351 aaPredicted RBP28.16■■■□□ 2.1
SLC38A1-207ENST00000549633 CCER1Q8TC90 406 aaPredicted RBP28.16■■■□□ 2.1
SLC38A1-207ENST00000549633 TAF1DQ9H5J8 278 aaPredicted RBP28.16■■■□□ 2.1
SLC38A1-207ENST00000549633 PRKAR2BP31323 418 aa28.14■■■□□ 2.1
SLC38A1-207ENST00000549633 CCDC93Q567U6 631 aa28.14■■■□□ 2.1
SLC38A1-207ENST00000549633 LDHDQ86WU2 507 aa28.14■■■□□ 2.1
SLC38A1-207ENST00000549633 L3MBTL3Q96JM7 780 aaPredicted RBP28.14■■■□□ 2.1
SLC38A1-207ENST00000549633 ZNF277Q9NRM2 450 aaPredicted RBP28.14■■■□□ 2.1
SLC38A1-207ENST00000549633 IQCA1LA6NCM1 817 aa28.13■■■□□ 2.09
SLC38A1-207ENST00000549633 FAM177BA6PVY3 158 aa28.13■■■□□ 2.09
SLC38A1-207ENST00000549633 EAPPQ56P03 285 aaPredicted RBP28.13■■■□□ 2.09
SLC38A1-207ENST00000549633 ADAMTSL1Q8N6G6 1762 aa28.11■■■□□ 2.09
SLC38A1-207ENST00000549633 ITGBL1O95965 494 aaPredicted RBP28.1■■■□□ 2.09
SLC38A1-207ENST00000549633 NPR1P16066 1061 aa28.1■■■□□ 2.09
SLC38A1-207ENST00000549633 VEGFBP49765 207 aa28.1■■■□□ 2.09
SLC38A1-207ENST00000549633 FKBP4Q02790 459 aaKnown RBP eCLIP28.1■■■□□ 2.09
SLC38A1-207ENST00000549633 RSPH6AQ9H0K4 717 aa28.1■■■□□ 2.09
SLC38A1-207ENST00000549633 CLEC4GQ6UXB4 293 aa28.09■■■□□ 2.09
SLC38A1-207ENST00000549633 MCM10Q7L590 875 aa28.09■■■□□ 2.09
SLC38A1-207ENST00000549633 NBPF26B4DH59 902 aa28.08■■■□□ 2.09
SLC38A1-207ENST00000549633 NBPF10Q6P3W6 841 aaKnown RBP28.08■■■□□ 2.09
SLC38A1-207ENST00000549633 NBPF15Q8N660 670 aa28.08■■■□□ 2.09
SLC38A1-207ENST00000549633 NIP7Q9Y221 180 aaKnown RBP eCLIP28.08■■■□□ 2.09
SLC38A1-207ENST00000549633 CLEC11AQ9Y240 323 aa28.08■■■□□ 2.09
SLC38A1-207ENST00000549633 NPC1L1Q9UHC9 1359 aa28.08■■■□□ 2.09
SLC38A1-207ENST00000549633 TMEM88BA6NKF7 163 aa28.07■■■□□ 2.08
SLC38A1-207ENST00000549633 ZNF652Q9Y2D9 606 aa28.07■■■□□ 2.08
SLC38A1-207ENST00000549633 KLRG2A4D1S0 409 aaPredicted RBP28.06■■■□□ 2.08
SLC38A1-207ENST00000549633 SNRPA1P09661 255 aaKnown RBP28.06■■■□□ 2.08
SLC38A1-207ENST00000549633 DCTN1Q14203 1278 aa28.06■■■□□ 2.08
SLC38A1-207ENST00000549633 HACL1Q9UJ83 578 aa28.06■■■□□ 2.08
SLC38A1-207ENST00000549633 RNF123Q5XPI4 1314 aa28.06■■■□□ 2.08
SLC38A1-207ENST00000549633 EPHX2P34913 555 aa28.05■■■□□ 2.08
SLC38A1-207ENST00000549633 TPTE2Q6XPS3 522 aa28.05■■■□□ 2.08
SLC38A1-207ENST00000549633 HLFQ16534 295 aa28.04■■■□□ 2.08
SLC38A1-207ENST00000549633 MAP1SQ66K74 1059 aaPredicted RBP28.03■■■□□ 2.08
SLC38A1-207ENST00000549633 SYNE4Q8N205 404 aa28.03■■■□□ 2.08
SLC38A1-207ENST00000549633 AIDAQ96BJ3 306 aa28.03■■■□□ 2.08
SLC38A1-207ENST00000549633 PRDM10Q9NQV6 1147 aa28.03■■■□□ 2.08
SLC38A1-207ENST00000549633 IARSP41252 1262 aaKnown RBP28.02■■■□□ 2.08
SLC38A1-207ENST00000549633 CTCFP49711 727 aaPredicted RBP28.02■■■□□ 2.08
SLC38A1-207ENST00000549633 COL4A5P29400 1685 aa28.02■■■□□ 2.08
SLC38A1-207ENST00000549633 LAMB4A4D0S4 1761 aa28.01■■■□□ 2.08
SLC38A1-207ENST00000549633 RTKN2Q8IZC4 609 aa28.01■■■□□ 2.07
SLC38A1-207ENST00000549633 RTF1Q92541 710 aaKnown RBP28.01■■■□□ 2.07
SLC38A1-207ENST00000549633 FZD9O00144 591 aa28■■■□□ 2.07
SLC38A1-207ENST00000549633 LBX1P52954 281 aa28■■■□□ 2.07
SLC38A1-207ENST00000549633 WBP1LQ9NX94 342 aa28■■■□□ 2.07
SLC38A1-207ENST00000549633 LTBP1Q14766 1721 aa28■■■□□ 2.07
SLC38A1-207ENST00000549633 SNED1Q8TER0 1413 aa28■■■□□ 2.07
SLC38A1-207ENST00000549633 ABCC12Q96J65 1359 aa27.99■■■□□ 2.07
SLC38A1-207ENST00000549633 SLC51AQ86UW1 340 aa27.99■■■□□ 2.07
SLC38A1-207ENST00000549633 CNTROBQ8N137 903 aa27.99■■■□□ 2.07
SLC38A1-207ENST00000549633 CFAP53Q96M91 514 aa27.99■■■□□ 2.07
SLC38A1-207ENST00000549633 U2AF1L5P0DN76 240 aaPredicted RBP27.98■■■□□ 2.07
SLC38A1-207ENST00000549633 U2AF1Q01081 240 aaKnown RBP eCLIP27.98■■■□□ 2.07
SLC38A1-207ENST00000549633 MIS18AQ9NYP9 233 aa27.98■■■□□ 2.07
SLC38A1-207ENST00000549633 GTF2E1P29083 439 aaPredicted RBP27.97■■■□□ 2.07
SLC38A1-207ENST00000549633 ALDH1B1P30837 517 aa27.97■■■□□ 2.07
SLC38A1-207ENST00000549633 NUTM1Q86Y26 1132 aa27.97■■■□□ 2.07
SLC38A1-207ENST00000549633 NGEFQ8N5V2 710 aa27.97■■■□□ 2.07
SLC38A1-207ENST00000549633 NUP98P52948 1817 aa27.97■■■□□ 2.07
SLC38A1-207ENST00000549633 DEFB115Q30KQ5 88 aa27.96■■■□□ 2.07
SLC38A1-207ENST00000549633 PNMA8AQ86V59 439 aaPredicted RBP27.96■■■□□ 2.07
SLC38A1-207ENST00000549633 RASSF10A6NK89 507 aa27.95■■■□□ 2.06
SLC38A1-207ENST00000549633 FMR1Q06787 632 aaKnown RBP eCLIP27.95■■■□□ 2.06
SLC38A1-207ENST00000549633 GPC2Q8N158 579 aa27.95■■■□□ 2.06
SLC38A1-207ENST00000549633 GJA3Q9Y6H8 435 aa27.95■■■□□ 2.06
SLC38A1-207ENST00000549633 NUDCQ9Y266 331 aa27.94■■■□□ 2.06
SLC38A1-207ENST00000549633 RGL2O15211 777 aa27.93■■■□□ 2.06
SLC38A1-207ENST00000549633 HSPA8P11142 646 aaKnown RBP27.93■■■□□ 2.06
SLC38A1-207ENST00000549633 ABT1Q9ULW3 272 aaKnown RBP27.93■■■□□ 2.06
SLC38A1-207ENST00000549633 WDR33Q9C0J8 1336 aaKnown RBP27.92■■■□□ 2.06
SLC38A1-207ENST00000549633 KDM3BQ7LBC6 1761 aa27.92■■■□□ 2.06
SLC38A1-207ENST00000549633 CRY2Q49AN0 593 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms