RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SRGNP10124 158 aa22.08■■□□□ 1.13
SSH1-208ENST00000548522 TAOK3Q9H2K8 898 aa22.08■■□□□ 1.13
SSH1-208ENST00000548522 POTEIP0CG38 1075 aa22.07■■□□□ 1.12
SSH1-208ENST00000548522 POTEJP0CG39 1038 aa22.07■■□□□ 1.12
SSH1-208ENST00000548522 ST5P78524 1137 aa22.07■■□□□ 1.12
SSH1-208ENST00000548522 DCTN1Q14203 1278 aa22.07■■□□□ 1.12
SSH1-208ENST00000548522 PDZRN3Q9UPQ7 1066 aa22.07■■□□□ 1.12
SSH1-208ENST00000548522 LTBP3Q9NS15 1303 aa22.06■■□□□ 1.12
SSH1-208ENST00000548522 STYK1Q6J9G0 422 aa22.06■■□□□ 1.12
SSH1-208ENST00000548522 NPM2Q86SE8 214 aaKnown RBP22.06■■□□□ 1.12
SSH1-208ENST00000548522 CACNA1SQ13698 1873 aa22.06■■□□□ 1.12
SSH1-208ENST00000548522 DDNO94850 711 aaPredicted RBP22.05■■□□□ 1.12
SSH1-208ENST00000548522 DPY19L2Q6NUT2 758 aa22.05■■□□□ 1.12
SSH1-208ENST00000548522 NBPF26B4DH59 902 aa22.04■■□□□ 1.12
SSH1-208ENST00000548522 U2AF1L5P0DN76 240 aaPredicted RBP22.04■■□□□ 1.12
SSH1-208ENST00000548522 U2AF1Q01081 240 aaKnown RBP eCLIP22.04■■□□□ 1.12
SSH1-208ENST00000548522 NBPF10Q6P3W6 841 aaKnown RBP22.04■■□□□ 1.12
SSH1-208ENST00000548522 NBPF5PQ86XG9 351 aaPredicted RBP22.04■■□□□ 1.12
SSH1-208ENST00000548522 NBPF15Q8N660 670 aa22.04■■□□□ 1.12
SSH1-208ENST00000548522 CNKSR1Q969H4 720 aa22.04■■□□□ 1.12
SSH1-208ENST00000548522 MASTLQ96GX5 879 aa22.04■■□□□ 1.12
SSH1-208ENST00000548522 CFAP53Q96M91 514 aa22.04■■□□□ 1.12
SSH1-208ENST00000548522 ARFGEF2Q9Y6D5 1785 aa22.03■■□□□ 1.12
SSH1-208ENST00000548522 HSPA1AP0DMV8 641 aaKnown RBP22.03■■□□□ 1.12
SSH1-208ENST00000548522 HSPA1BP0DMV9 641 aaKnown RBP22.03■■□□□ 1.12
SSH1-208ENST00000548522 OLFM4Q6UX06 510 aa22.03■■□□□ 1.12
SSH1-208ENST00000548522 DICER1Q9UPY3 1922 aaKnown RBP22.03■■□□□ 1.12
SSH1-208ENST00000548522 CAPN15O75808 1086 aa22.02■■□□□ 1.12
SSH1-208ENST00000548522 SNRPA1P09661 255 aaKnown RBP22.02■■□□□ 1.12
SSH1-208ENST00000548522 PPP2R1AP30153 589 aa22.02■■□□□ 1.12
SSH1-208ENST00000548522 C7orf43Q8WVR3 580 aa22.02■■□□□ 1.12
SSH1-208ENST00000548522 RTF1Q92541 710 aaKnown RBP22.01■■□□□ 1.11
SSH1-208ENST00000548522 FAM177BA6PVY3 158 aa22■■□□□ 1.11
SSH1-208ENST00000548522 CHADLQ6NUI6 762 aa21.99■■□□□ 1.11
SSH1-208ENST00000548522 CLEC4GQ6UXB4 293 aa21.99■■□□□ 1.11
SSH1-208ENST00000548522 TNS4Q8IZW8 715 aa21.99■■□□□ 1.11
SSH1-208ENST00000548522 MIS18AQ9NYP9 233 aa21.99■■□□□ 1.11
SSH1-208ENST00000548522 NIP7Q9Y221 180 aaKnown RBP eCLIP21.99■■□□□ 1.11
SSH1-208ENST00000548522 NUDCQ9Y266 331 aa21.99■■□□□ 1.11
SSH1-208ENST00000548522 ZNF652Q9Y2D9 606 aa21.99■■□□□ 1.11
SSH1-208ENST00000548522 HLFQ16534 295 aa21.98■■□□□ 1.11
SSH1-208ENST00000548522 ZNF541Q9H0D2 1346 aa21.98■■□□□ 1.11
SSH1-208ENST00000548522 NPR1P16066 1061 aa21.97■■□□□ 1.11
SSH1-208ENST00000548522 CCDC93Q567U6 631 aa21.97■■□□□ 1.11
SSH1-208ENST00000548522 SOGA3Q5TF21 947 aa21.97■■□□□ 1.11
SSH1-208ENST00000548522 ZNF277Q9NRM2 450 aaPredicted RBP21.97■■□□□ 1.11
SSH1-208ENST00000548522 MKRN1Q9UHC7 482 aaKnown RBP21.97■■□□□ 1.11
SSH1-208ENST00000548522 KLRG2A4D1S0 409 aaPredicted RBP21.96■■□□□ 1.11
SSH1-208ENST00000548522 ABCC12Q96J65 1359 aa21.96■■□□□ 1.11
SSH1-208ENST00000548522 CREBZFQ9NS37 354 aa21.95■■□□□ 1.1
SSH1-208ENST00000548522 FKBP4Q02790 459 aaKnown RBP eCLIP21.94■■□□□ 1.1
SSH1-208ENST00000548522 L3MBTL3Q96JM7 780 aaPredicted RBP21.94■■□□□ 1.1
SSH1-208ENST00000548522 TAF1DQ9H5J8 278 aaPredicted RBP21.94■■□□□ 1.1
SSH1-208ENST00000548522 LAMB4A4D0S4 1761 aa21.93■■□□□ 1.1
SSH1-208ENST00000548522 TPTE2Q6XPS3 522 aa21.93■■□□□ 1.1
SSH1-208ENST00000548522 SLC51AQ86UW1 340 aa21.93■■□□□ 1.1
SSH1-208ENST00000548522 SNED1Q8TER0 1413 aa21.92■■□□□ 1.1
SSH1-208ENST00000548522 PASKQ96RG2 1323 aa21.92■■□□□ 1.1
SSH1-208ENST00000548522 TAF7Q15545 349 aaPredicted RBP21.92■■□□□ 1.1
SSH1-208ENST00000548522 NGEFQ8N5V2 710 aa21.92■■□□□ 1.1
SSH1-208ENST00000548522 IQCA1LA6NCM1 817 aa21.91■■□□□ 1.1
SSH1-208ENST00000548522 HTATSF1O43719 755 aaKnown RBP21.91■■□□□ 1.1
SSH1-208ENST00000548522 LDHDQ86WU2 507 aa21.91■■□□□ 1.1
SSH1-208ENST00000548522 NUTM1Q86Y26 1132 aa21.91■■□□□ 1.1
SSH1-208ENST00000548522 THUMPD2Q9BTF0 503 aaKnown RBP21.9■■□□□ 1.1
SSH1-208ENST00000548522 COL4A5P29400 1685 aa21.9■■□□□ 1.1
SSH1-208ENST00000548522 CNTNAP1P78357 1384 aa21.89■■□□□ 1.1
SSH1-208ENST00000548522 RGL2O15211 777 aa21.89■■□□□ 1.09
SSH1-208ENST00000548522 EAPPQ56P03 285 aaPredicted RBP21.89■■□□□ 1.09
SSH1-208ENST00000548522 TTLL7Q6ZT98 887 aa21.89■■□□□ 1.09
SSH1-208ENST00000548522 KDM3BQ7LBC6 1761 aa21.89■■□□□ 1.09
SSH1-208ENST00000548522 RNF123Q5XPI4 1314 aa21.88■■□□□ 1.09
SSH1-208ENST00000548522 SCN4AP35499 1836 aa21.87■■□□□ 1.09
SSH1-208ENST00000548522 ADAMTSL1Q8N6G6 1762 aa21.87■■□□□ 1.09
SSH1-208ENST00000548522 UBN2Q6ZU65 1347 aa21.87■■□□□ 1.09
SSH1-208ENST00000548522 ITGBL1O95965 494 aaPredicted RBP21.87■■□□□ 1.09
SSH1-208ENST00000548522 GTF2E1P29083 439 aaPredicted RBP21.87■■□□□ 1.09
SSH1-208ENST00000548522 IARSP41252 1262 aaKnown RBP21.87■■□□□ 1.09
SSH1-208ENST00000548522 CRY2Q49AN0 593 aa21.87■■□□□ 1.09
SSH1-208ENST00000548522 RTKN2Q8IZC4 609 aa21.87■■□□□ 1.09
SSH1-208ENST00000548522 SYNE4Q8N205 404 aa21.87■■□□□ 1.09
SSH1-208ENST00000548522 GPTP24298 496 aa21.86■■□□□ 1.09
SSH1-208ENST00000548522 HACL1Q9UJ83 578 aa21.86■■□□□ 1.09
SSH1-208ENST00000548522 MAP3K15Q6ZN16 1313 aa21.85■■□□□ 1.09
SSH1-208ENST00000548522 FZD9O00144 591 aa21.85■■□□□ 1.09
SSH1-208ENST00000548522 MYL6BP14649 208 aa21.85■■□□□ 1.09
SSH1-208ENST00000548522 EPHX2P34913 555 aa21.85■■□□□ 1.09
SSH1-208ENST00000548522 EIF4A1P60842 406 aaKnown RBP21.85■■□□□ 1.09
SSH1-208ENST00000548522 PLEKHF1Q96S99 279 aa21.85■■□□□ 1.09
SSH1-208ENST00000548522 ZBTB3Q9H5J0 574 aa21.85■■□□□ 1.09
SSH1-208ENST00000548522 RRP7AQ9Y3A4 280 aaKnown RBP21.85■■□□□ 1.09
SSH1-208ENST00000548522 FOXN1O15353 648 aa21.84■■□□□ 1.09
SSH1-208ENST00000548522 ALDH1B1P30837 517 aa21.84■■□□□ 1.09
SSH1-208ENST00000548522 DLG5Q8TDM6 1919 aa21.84■■□□□ 1.09
SSH1-208ENST00000548522 MAP1SQ66K74 1059 aaPredicted RBP21.83■■□□□ 1.09
SSH1-208ENST00000548522 C3orf67Q6ZVT6 689 aa21.83■■□□□ 1.09
SSH1-208ENST00000548522 CLEC11AQ9Y240 323 aa21.83■■□□□ 1.09
SSH1-208ENST00000548522 ERVV-1B6SEH8 477 aa21.82■■□□□ 1.08
SSH1-208ENST00000548522 VEGFBP49765 207 aa21.82■■□□□ 1.08
SSH1-208ENST00000548522 KIF6Q6ZMV9 814 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms