RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 CACNA1FO60840 1977 aa14.22□□□□□ -0.13
GCN1-202ENST00000547263 COL11A2P13942 1736 aaPredicted RBP14.22□□□□□ -0.13
GCN1-202ENST00000547263 HLFQ16534 295 aa14.22□□□□□ -0.13
GCN1-202ENST00000547263 DIEXFQ68CQ4 756 aaKnown RBP14.22□□□□□ -0.13
GCN1-202ENST00000547263 TTLL7Q6ZT98 887 aa14.22□□□□□ -0.13
GCN1-202ENST00000547263 LAS1LQ9Y4W2 734 aaKnown RBP14.22□□□□□ -0.13
GCN1-202ENST00000547263 GIGYF2Q6Y7W6 1299 aaKnown RBP14.21□□□□□ -0.13
GCN1-202ENST00000547263 C8orf58Q8NAV2 365 aa14.21□□□□□ -0.13
GCN1-202ENST00000547263 ZNF652Q9Y2D9 606 aa14.21□□□□□ -0.13
GCN1-202ENST00000547263 RIC1Q4ADV7 1423 aa14.21□□□□□ -0.13
GCN1-202ENST00000547263 ARFGEF2Q9Y6D5 1785 aa14.2□□□□□ -0.14
GCN1-202ENST00000547263 YBX3P16989 372 aaKnown RBP eCLIP14.2□□□□□ -0.141e-7■□□□□ 8.1
GCN1-202ENST00000547263 EIF2S2P20042 333 aaKnown RBP14.2□□□□□ -0.14
GCN1-202ENST00000547263 HDGFL1Q5TGJ6 251 aa14.2□□□□□ -0.14
GCN1-202ENST00000547263 PRR5LQ6MZQ0 368 aa14.2□□□□□ -0.14
GCN1-202ENST00000547263 SPINK5Q9NQ38 1064 aaPredicted RBP14.2□□□□□ -0.14
GCN1-202ENST00000547263 ZNF330Q9Y3S2 320 aaPredicted RBP14.2□□□□□ -0.14
GCN1-202ENST00000547263 FANCIQ9NVI1 1328 aa14.19□□□□□ -0.14
GCN1-202ENST00000547263 MYL6BP14649 208 aa14.19□□□□□ -0.14
GCN1-202ENST00000547263 NPM2Q86SE8 214 aaKnown RBP14.19□□□□□ -0.14
GCN1-202ENST00000547263 ZNF34Q8IZ26 560 aa14.19□□□□□ -0.14
GCN1-202ENST00000547263 TSPYL6Q8N831 410 aa14.19□□□□□ -0.14
GCN1-202ENST00000547263 TSR2Q969E8 191 aaKnown RBP14.19□□□□□ -0.14
GCN1-202ENST00000547263 SETDB2Q96T68 719 aa14.19□□□□□ -0.14
GCN1-202ENST00000547263 CHPF2Q9P2E5 772 aa14.19□□□□□ -0.14
GCN1-202ENST00000547263 DBF4Q9UBU7 674 aaPredicted RBP14.19□□□□□ -0.14
GCN1-202ENST00000547263 KLRG2A4D1S0 409 aaPredicted RBP14.18□□□□□ -0.14
GCN1-202ENST00000547263 ANXA1P04083 346 aa14.18□□□□□ -0.14
GCN1-202ENST00000547263 COPS6Q7L5N1 327 aa14.18□□□□□ -0.14
GCN1-202ENST00000547263 KLHL34Q8N239 644 aa14.18□□□□□ -0.14
GCN1-202ENST00000547263 UBN2Q6ZU65 1347 aa14.17□□□□□ -0.14
GCN1-202ENST00000547263 TNRC6CQ9HCJ0 1690 aaKnown RBP14.17□□□□□ -0.14
GCN1-202ENST00000547263 DPEP1P16444 411 aa14.17□□□□□ -0.14
GCN1-202ENST00000547263 KIF6Q6ZMV9 814 aa14.17□□□□□ -0.14
GCN1-202ENST00000547263 MIER1Q8N108 512 aa14.17□□□□□ -0.14
GCN1-202ENST00000547263 BRIP1Q9BX63 1249 aa14.17□□□□□ -0.14
GCN1-202ENST00000547263 CHMP4AQ9BY43 222 aa14.17□□□□□ -0.14
GCN1-202ENST00000547263 HYPKQ9NX55 129 aa14.17□□□□□ -0.14
GCN1-202ENST00000547263 PDZRN3Q9UPQ7 1066 aa14.17□□□□□ -0.14
GCN1-202ENST00000547263 SENP3-EIF4A1A0A087X0R7 540 aa14.16□□□□□ -0.14
GCN1-202ENST00000547263 A0A0G2JLW4 131 aa14.16□□□□□ -0.14
GCN1-202ENST00000547263 BICDL1Q6ZP65 573 aa14.16□□□□□ -0.14
GCN1-202ENST00000547263 XAGE3Q8WTP9 111 aa14.16□□□□□ -0.14
GCN1-202ENST00000547263 NIP7Q9Y221 180 aaKnown RBP eCLIP14.16□□□□□ -0.14
GCN1-202ENST00000547263 GRIN3BO60391 1043 aa14.15□□□□□ -0.14
GCN1-202ENST00000547263 VAMP4O75379 141 aa14.15□□□□□ -0.14
GCN1-202ENST00000547263 TRMT2AQ8IZ69 625 aaKnown RBP14.15□□□□□ -0.14
GCN1-202ENST00000547263 PLBD2Q8NHP8 589 aa14.15□□□□□ -0.14
GCN1-202ENST00000547263 NECTIN2Q92692 538 aa14.15□□□□□ -0.14
GCN1-202ENST00000547263 ZBTB3Q9H5J0 574 aa14.15□□□□□ -0.14
GCN1-202ENST00000547263 DCAF8L1A6NGE4 600 aa14.14□□□□□ -0.15
GCN1-202ENST00000547263 NTSR2O95665 410 aa14.14□□□□□ -0.15
GCN1-202ENST00000547263 TWISTNBQ3B726 338 aaPredicted RBP14.14□□□□□ -0.15
GCN1-202ENST00000547263 PARP10Q53GL7 1025 aa14.14□□□□□ -0.15
GCN1-202ENST00000547263 CCDC30Q5VVM6 783 aa14.14□□□□□ -0.15
GCN1-202ENST00000547263 CNBD1Q8NA66 436 aa14.14□□□□□ -0.15
GCN1-202ENST00000547263 RNF123Q5XPI4 1314 aa14.14□□□□□ -0.15
GCN1-202ENST00000547263 ABCC12Q96J65 1359 aa14.13□□□□□ -0.15
GCN1-202ENST00000547263 ELL2O00472 640 aaPredicted RBP14.13□□□□□ -0.15
GCN1-202ENST00000547263 CHRNA5P30532 468 aa14.13□□□□□ -0.15
GCN1-202ENST00000547263 PDE6BP35913 854 aa14.13□□□□□ -0.15
GCN1-202ENST00000547263 TRIM28Q13263 835 aaKnown RBP14.13□□□□□ -0.15
GCN1-202ENST00000547263 TCIRG1Q13488 830 aa14.13□□□□□ -0.15
GCN1-202ENST00000547263 GPR162Q16538 588 aa14.13□□□□□ -0.15
GCN1-202ENST00000547263 CRY2Q49AN0 593 aa14.13□□□□□ -0.15
GCN1-202ENST00000547263 HSP90AB3PQ58FF7 597 aa14.13□□□□□ -0.15
GCN1-202ENST00000547263 SUSD4Q5VX71 490 aa14.13□□□□□ -0.15
GCN1-202ENST00000547263 TPTE2Q6XPS3 522 aa14.13□□□□□ -0.15
GCN1-202ENST00000547263 ISCA1Q9BUE6 129 aa14.13□□□□□ -0.15
GCN1-202ENST00000547263 MYH16Q9H6N6 1097 aa14.13□□□□□ -0.15
GCN1-202ENST00000547263 PIM2Q9P1W9 311 aa14.13□□□□□ -0.15
GCN1-202ENST00000547263 SALL2Q9Y467 1007 aaPredicted RBP14.13□□□□□ -0.15
GCN1-202ENST00000547263 LAMB2P55268 1798 aa14.13□□□□□ -0.15
GCN1-202ENST00000547263 SRGNP10124 158 aa14.12□□□□□ -0.15
GCN1-202ENST00000547263 EXOSC9Q06265 439 aaKnown RBP14.12□□□□□ -0.15
GCN1-202ENST00000547263 GOLGA2Q08379 1002 aa14.12□□□□□ -0.15
GCN1-202ENST00000547263 SLC10A5Q5PT55 438 aa14.12□□□□□ -0.15
GCN1-202ENST00000547263 ANKRD13DQ6ZTN6 518 aa14.12□□□□□ -0.15
GCN1-202ENST00000547263 NBPF5PQ86XG9 351 aaPredicted RBP14.12□□□□□ -0.15
GCN1-202ENST00000547263 NYXQ9GZU5 481 aa14.12□□□□□ -0.15
GCN1-202ENST00000547263 PHAXQ9H814 394 aaKnown RBP14.12□□□□□ -0.15
GCN1-202ENST00000547263 DDX60Q8IY21 1712 aaKnown RBP14.12□□□□□ -0.15
GCN1-202ENST00000547263 FER1L6Q2WGJ9 1857 aa14.12□□□□□ -0.15
GCN1-202ENST00000547263 ADCY9O60503 1353 aa14.11□□□□□ -0.15
GCN1-202ENST00000547263 SLX4Q8IY92 1834 aa14.11□□□□□ -0.15
GCN1-202ENST00000547263 SBF1O95248 1867 aa14.11□□□□□ -0.15
GCN1-202ENST00000547263 ST5P78524 1137 aa14.11□□□□□ -0.15
GCN1-202ENST00000547263 SLFN5Q08AF3 891 aa14.11□□□□□ -0.15
GCN1-202ENST00000547263 NLRP10Q86W26 655 aa14.11□□□□□ -0.15
GCN1-202ENST00000547263 SNED1Q8TER0 1413 aa14.1□□□□□ -0.15
GCN1-202ENST00000547263 E9PSI1 815 aa14.1□□□□□ -0.15
GCN1-202ENST00000547263 AIMP1Q12904 312 aaKnown RBP14.1□□□□□ -0.15
GCN1-202ENST00000547263 STYK1Q6J9G0 422 aa14.1□□□□□ -0.15
GCN1-202ENST00000547263 C2CD5Q86YS7 1000 aa14.1□□□□□ -0.15
GCN1-202ENST00000547263 CACNA1SQ13698 1873 aa14.1□□□□□ -0.15
GCN1-202ENST00000547263 UTRNP46939 3433 aa14.09□□□□□ -0.15
GCN1-202ENST00000547263 GOLGB1Q14789 3259 aaKnown RBP14.09□□□□□ -0.15
GCN1-202ENST00000547263 H0YIN7 160 aa14.09□□□□□ -0.15
GCN1-202ENST00000547263 GPTP24298 496 aa14.09□□□□□ -0.15
GCN1-202ENST00000547263 DALRD3Q5D0E6 543 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms