RNA–Protein interactions for RNA: ENST00000544866.5

PDCD2-213, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-213ENST00000544866 PARP3Q9Y6F1 533 aa21.77■■□□□ 1.08
PDCD2-213ENST00000544866 C10orf71Q711Q0 1435 aa21.77■■□□□ 1.08
PDCD2-213ENST00000544866 CACNA1FO60840 1977 aa21.77■■□□□ 1.08
PDCD2-213ENST00000544866 KLHL34Q8N239 644 aa21.76■■□□□ 1.07
PDCD2-213ENST00000544866 MYH16Q9H6N6 1097 aa21.76■■□□□ 1.07
PDCD2-213ENST00000544866 DBF4Q9UBU7 674 aaPredicted RBP21.76■■□□□ 1.07
PDCD2-213ENST00000544866 ANKRD36CQ5JPF3 1778 aa21.76■■□□□ 1.07
PDCD2-213ENST00000544866 MAP3K15Q6ZN16 1313 aa21.76■■□□□ 1.07
PDCD2-213ENST00000544866 EXOSC9Q06265 439 aaKnown RBP21.75■■□□□ 1.07
PDCD2-213ENST00000544866 GOLGA2Q08379 1002 aa21.75■■□□□ 1.07
PDCD2-213ENST00000544866 HLFQ16534 295 aa21.75■■□□□ 1.07
PDCD2-213ENST00000544866 TWISTNBQ3B726 338 aaPredicted RBP21.75■■□□□ 1.07
PDCD2-213ENST00000544866 CLEC4GQ6UXB4 293 aa21.75■■□□□ 1.07
PDCD2-213ENST00000544866 CD2APQ9Y5K6 639 aa21.75■■□□□ 1.07
PDCD2-213ENST00000544866 ERVV-1B6SEH8 477 aa21.74■■□□□ 1.07
PDCD2-213ENST00000544866 KIF6Q6ZMV9 814 aa21.74■■□□□ 1.07
PDCD2-213ENST00000544866 BICDL1Q6ZP65 573 aa21.74■■□□□ 1.07
PDCD2-213ENST00000544866 NLGN2Q8NFZ4 835 aa21.74■■□□□ 1.07
PDCD2-213ENST00000544866 COPS6Q7L5N1 327 aa21.73■■□□□ 1.07
PDCD2-213ENST00000544866 XAGE3Q8WTP9 111 aa21.73■■□□□ 1.07
PDCD2-213ENST00000544866 ZNF652Q9Y2D9 606 aa21.73■■□□□ 1.07
PDCD2-213ENST00000544866 N4BP2Q86UW6 1770 aaPredicted RBP21.73■■□□□ 1.07
PDCD2-213ENST00000544866 CARMIL3Q8ND23 1372 aa21.73■■□□□ 1.07
PDCD2-213ENST00000544866 ARFGEF2Q9Y6D5 1785 aa21.72■■□□□ 1.07
PDCD2-213ENST00000544866 E9PSI1 815 aa21.72■■□□□ 1.07
PDCD2-213ENST00000544866 SLFN5Q08AF3 891 aa21.72■■□□□ 1.07
PDCD2-213ENST00000544866 ZBTB3Q9H5J0 574 aa21.72■■□□□ 1.07
PDCD2-213ENST00000544866 ANKRD31Q8N7Z5 1873 aa21.72■■□□□ 1.07
PDCD2-213ENST00000544866 ATP10DQ9P241 1426 aa21.72■■□□□ 1.07
PDCD2-213ENST00000544866 SERPINB2P05120 415 aa21.71■■□□□ 1.07
PDCD2-213ENST00000544866 CCDC30Q5VVM6 783 aa21.71■■□□□ 1.07
PDCD2-213ENST00000544866 CDCA7LQ96GN5 454 aa21.71■■□□□ 1.07
PDCD2-213ENST00000544866 CHMP4AQ9BY43 222 aa21.71■■□□□ 1.07
PDCD2-213ENST00000544866 HYPKQ9NX55 129 aa21.71■■□□□ 1.07
PDCD2-213ENST00000544866 VAMP4O75379 141 aa21.7■■□□□ 1.06
PDCD2-213ENST00000544866 AIMP1Q12904 312 aaKnown RBP21.7■■□□□ 1.06
PDCD2-213ENST00000544866 SETDB2Q96T68 719 aa21.7■■□□□ 1.06
PDCD2-213ENST00000544866 BRCA1P38398 1863 aaKnown RBP21.7■■□□□ 1.06
PDCD2-213ENST00000544866 PXDNLA1KZ92 1463 aa21.69■■□□□ 1.06
PDCD2-213ENST00000544866 UTRNP46939 3433 aa21.68■■□□□ 1.06
PDCD2-213ENST00000544866 GIGYF2Q6Y7W6 1299 aaKnown RBP21.68■■□□□ 1.06
PDCD2-213ENST00000544866 TRMT2AQ8IZ69 625 aaKnown RBP21.68■■□□□ 1.06
PDCD2-213ENST00000544866 PHAXQ9H814 394 aaKnown RBP21.68■■□□□ 1.06
PDCD2-213ENST00000544866 NIP7Q9Y221 180 aaKnown RBP eCLIP21.68■■□□□ 1.06
PDCD2-213ENST00000544866 TCERG1O14776 1098 aaKnown RBP21.67■■□□□ 1.06
PDCD2-213ENST00000544866 HNRNPUQ00839 825 aaKnown RBP eCLIP21.67■■□□□ 1.06
PDCD2-213ENST00000544866 DLEC1Q9Y238 1755 aa21.66■■□□□ 1.06
PDCD2-213ENST00000544866 PRR5LQ6MZQ0 368 aa21.66■■□□□ 1.06
PDCD2-213ENST00000544866 ZNF34Q8IZ26 560 aa21.66■■□□□ 1.06
PDCD2-213ENST00000544866 UBN2Q6ZU65 1347 aa21.65■■□□□ 1.06
PDCD2-213ENST00000544866 ANKRD13DQ6ZTN6 518 aa21.65■■□□□ 1.06
PDCD2-213ENST00000544866 PLBD2Q8NHP8 589 aa21.65■■□□□ 1.06
PDCD2-213ENST00000544866 STK31Q9BXU1 1019 aa21.65■■□□□ 1.06
PDCD2-213ENST00000544866 COL11A2P13942 1736 aaPredicted RBP21.64■■□□□ 1.06
PDCD2-213ENST00000544866 GPTP24298 496 aa21.63■■□□□ 1.05
PDCD2-213ENST00000544866 TGFB2P61812 414 aa21.63■■□□□ 1.05
PDCD2-213ENST00000544866 NBPF5PQ86XG9 351 aaPredicted RBP21.63■■□□□ 1.05
PDCD2-213ENST00000544866 CNBD1Q8NA66 436 aa21.63■■□□□ 1.05
PDCD2-213ENST00000544866 IBTKQ9P2D0 1353 aaPredicted RBP21.62■■□□□ 1.05
PDCD2-213ENST00000544866 SLC4A2P04920 1241 aa21.62■■□□□ 1.05
PDCD2-213ENST00000544866 TCIRG1Q13488 830 aa21.62■■□□□ 1.05
PDCD2-213ENST00000544866 HSP90AB3PQ58FF7 597 aa21.62■■□□□ 1.05
PDCD2-213ENST00000544866 G2E3Q7L622 706 aa21.62■■□□□ 1.05
PDCD2-213ENST00000544866 CCDC24Q8N4L8 307 aa21.62■■□□□ 1.05
PDCD2-213ENST00000544866 TNRC6CQ9HCJ0 1690 aaKnown RBP21.61■■□□□ 1.05
PDCD2-213ENST00000544866 DPEP1P16444 411 aa21.61■■□□□ 1.05
PDCD2-213ENST00000544866 A0A0G2JLW4 131 aa21.6■■□□□ 1.05
PDCD2-213ENST00000544866 FAM177BA6PVY3 158 aa21.6■■□□□ 1.05
PDCD2-213ENST00000544866 KCNA3P22001 575 aa21.6■■□□□ 1.05
PDCD2-213ENST00000544866 ZBED9Q6R2W3 1325 aa21.59■■□□□ 1.05
PDCD2-213ENST00000544866 NTSR2O95665 410 aa21.59■■□□□ 1.05
PDCD2-213ENST00000544866 CHRNA5P30532 468 aa21.59■■□□□ 1.05
PDCD2-213ENST00000544866 ST5P78524 1137 aa21.59■■□□□ 1.05
PDCD2-213ENST00000544866 PARP10Q53GL7 1025 aa21.59■■□□□ 1.05
PDCD2-213ENST00000544866 SUSD4Q5VX71 490 aa21.59■■□□□ 1.05
PDCD2-213ENST00000544866 TPTE2Q6XPS3 522 aa21.59■■□□□ 1.05
PDCD2-213ENST00000544866 ISCA1Q9BUE6 129 aa21.59■■□□□ 1.05
PDCD2-213ENST00000544866 BRIP1Q9BX63 1249 aa21.59■■□□□ 1.05
PDCD2-213ENST00000544866 ADCY9O60503 1353 aa21.59■■□□□ 1.05
PDCD2-213ENST00000544866 ARFGEF1Q9Y6D6 1849 aa21.58■■□□□ 1.05
PDCD2-213ENST00000544866 FLIIQ13045 1269 aa21.58■■□□□ 1.05
PDCD2-213ENST00000544866 RIC3Q7Z5B4 369 aa21.58■■□□□ 1.05
PDCD2-213ENST00000544866 NLRP10Q86W26 655 aa21.58■■□□□ 1.05
PDCD2-213ENST00000544866 NYXQ9GZU5 481 aa21.58■■□□□ 1.05
PDCD2-213ENST00000544866 ABCC12Q96J65 1359 aa21.58■■□□□ 1.04
PDCD2-213ENST00000544866 NPHP1O15259 732 aa21.57■■□□□ 1.04
PDCD2-213ENST00000544866 DDX58O95786 925 aaKnown RBP21.57■■□□□ 1.04
PDCD2-213ENST00000544866 RIC1Q4ADV7 1423 aa21.56■■□□□ 1.04
PDCD2-213ENST00000544866 CACNA1SQ13698 1873 aa21.56■■□□□ 1.04
PDCD2-213ENST00000544866 YBX3P16989 372 aaKnown RBP eCLIP21.56■■□□□ 1.04
PDCD2-213ENST00000544866 KSR2Q6VAB6 950 aa21.56■■□□□ 1.04
PDCD2-213ENST00000544866 NUTM1Q86Y26 1132 aa21.56■■□□□ 1.04
PDCD2-213ENST00000544866 LAMB2P55268 1798 aa21.56■■□□□ 1.04
PDCD2-213ENST00000544866 DDX60Q8IY21 1712 aaKnown RBP21.55■■□□□ 1.04
PDCD2-213ENST00000544866 PI4KAP2A4QPH2 592 aa21.55■■□□□ 1.04
PDCD2-213ENST00000544866 ATP5J2-PTCD1G3V325 749 aa21.55■■□□□ 1.04
PDCD2-213ENST00000544866 ERFEQ4G0M1 354 aa21.55■■□□□ 1.04
PDCD2-213ENST00000544866 PPP1R42Q7Z4L9 355 aa21.55■■□□□ 1.04
PDCD2-213ENST00000544866 PI4KAP1Q8N8J0 262 aa21.55■■□□□ 1.04
PDCD2-213ENST00000544866 METTL22Q9BUU2 404 aaPredicted RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms