RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 USP44Q9H0E7 712 aa20.15■□□□□ 0.82
XRCC1-202ENST00000543982 TBC1D2BQ9UPU7 963 aa20.15■□□□□ 0.82
XRCC1-202ENST00000543982 MYH14Q7Z406 1995 aaKnown RBP20.15■□□□□ 0.82
XRCC1-202ENST00000543982 IGHDP01880 384 aa20.15■□□□□ 0.82
XRCC1-202ENST00000543982 HLFQ16534 295 aa20.15■□□□□ 0.82
XRCC1-202ENST00000543982 MYD88Q99836 296 aa20.15■□□□□ 0.82
XRCC1-202ENST00000543982 ATP5J2-PTCD1G3V325 749 aa20.14■□□□□ 0.81
XRCC1-202ENST00000543982 IL6STP40189 918 aaPredicted RBP20.14■□□□□ 0.81
XRCC1-202ENST00000543982 ARXQ96QS3 562 aa20.14■□□□□ 0.81
XRCC1-202ENST00000543982 SRCIN1Q9C0H9 1055 aa20.14■□□□□ 0.81
XRCC1-202ENST00000543982 CICQ96RK0 1608 aaPredicted RBP20.12■□□□□ 0.81
XRCC1-202ENST00000543982 TXNRD1Q16881 649 aa20.12■□□□□ 0.81
XRCC1-202ENST00000543982 ATP10DQ9P241 1426 aa20.12■□□□□ 0.81
XRCC1-202ENST00000543982 LY75O60449 1722 aa20.12■□□□□ 0.81
XRCC1-202ENST00000543982 NBPF7P0C2Y1 421 aaPredicted RBP20.12■□□□□ 0.81
XRCC1-202ENST00000543982 SIRT2Q8IXJ6 389 aa20.12■□□□□ 0.81
XRCC1-202ENST00000543982 JARID2Q92833 1246 aaPredicted RBP20.12■□□□□ 0.81
XRCC1-202ENST00000543982 CNTNAP4Q9C0A0 1308 aa20.11■□□□□ 0.81
XRCC1-202ENST00000543982 PXDNLA1KZ92 1463 aa20.11■□□□□ 0.81
XRCC1-202ENST00000543982 NEURL1BA8MQ27 555 aa20.11■□□□□ 0.81
XRCC1-202ENST00000543982 DZIP3Q86Y13 1208 aaKnown RBP20.11■□□□□ 0.81
XRCC1-202ENST00000543982 LINS1Q8NG48 757 aa20.11■□□□□ 0.81
XRCC1-202ENST00000543982 ZNF831Q5JPB2 1677 aa20.11■□□□□ 0.81
XRCC1-202ENST00000543982 RC3H1Q5TC82 1133 aaKnown RBP20.1■□□□□ 0.81
XRCC1-202ENST00000543982 COL5A3P25940 1745 aaPredicted RBP20.1■□□□□ 0.81
XRCC1-202ENST00000543982 MAP3K15Q6ZN16 1313 aa20.1■□□□□ 0.81
XRCC1-202ENST00000543982 PLSCR1O15162 318 aa20.1■□□□□ 0.81
XRCC1-202ENST00000543982 RREB1Q92766 1687 aa20.09■□□□□ 0.81
XRCC1-202ENST00000543982 GNPATO15228 680 aa20.09■□□□□ 0.81
XRCC1-202ENST00000543982 RPS6KA4O75676 772 aa20.08■□□□□ 0.81
XRCC1-202ENST00000543982 CAMTA2O94983 1202 aa20.08■□□□□ 0.81
XRCC1-202ENST00000543982 KDM2BQ8NHM5 1336 aa20.08■□□□□ 0.8
XRCC1-202ENST00000543982 ALDH1L1O75891 902 aa20.08■□□□□ 0.8
XRCC1-202ENST00000543982 GCKRQ14397 625 aa20.08■□□□□ 0.8
XRCC1-202ENST00000543982 SLC27A3Q5K4L6 730 aa20.08■□□□□ 0.8
XRCC1-202ENST00000543982 KIF6Q6ZMV9 814 aa20.08■□□□□ 0.8
XRCC1-202ENST00000543982 TCIRG1Q13488 830 aa20.07■□□□□ 0.8
XRCC1-202ENST00000543982 COL15A1P39059 1388 aa20.07■□□□□ 0.8
XRCC1-202ENST00000543982 AAMPQ13685 434 aa20.06■□□□□ 0.8
XRCC1-202ENST00000543982 GIGYF2Q6Y7W6 1299 aaKnown RBP20.06■□□□□ 0.8
XRCC1-202ENST00000543982 SKAP1Q86WV1 359 aa20.06■□□□□ 0.8
XRCC1-202ENST00000543982 ISCA1Q9BUE6 129 aa20.06■□□□□ 0.8
XRCC1-202ENST00000543982 EN1Q05925 392 aaPredicted RBP20.06■□□□□ 0.8
XRCC1-202ENST00000543982 NEXNQ0ZGT2 675 aa20.06■□□□□ 0.8
XRCC1-202ENST00000543982 KAZALD1Q96I82 304 aa20.06■□□□□ 0.8
XRCC1-202ENST00000543982 LRRFIP2Q9Y608 721 aaKnown RBP20.06■□□□□ 0.8
XRCC1-202ENST00000543982 SRP68Q9UHB9 627 aaKnown RBP20.05■□□□□ 0.8
XRCC1-202ENST00000543982 ARFGEF2Q9Y6D5 1785 aa20.05■□□□□ 0.8
XRCC1-202ENST00000543982 NUP188Q5SRE5 1749 aa20.05■□□□□ 0.8
XRCC1-202ENST00000543982 ERVV-1B6SEH8 477 aa20.04■□□□□ 0.8
XRCC1-202ENST00000543982 GPTP24298 496 aa20.04■□□□□ 0.8
XRCC1-202ENST00000543982 ARHGEF1Q92888 912 aaKnown RBP20.04■□□□□ 0.8
XRCC1-202ENST00000543982 GRM8O00222 908 aa20.04■□□□□ 0.8
XRCC1-202ENST00000543982 PHF14O94880 888 aa20.04■□□□□ 0.8
XRCC1-202ENST00000543982 EZH2Q15910 746 aaKnown RBP20.04■□□□□ 0.8
XRCC1-202ENST00000543982 ZNF827Q17R98 1081 aa20.04■□□□□ 0.8
XRCC1-202ENST00000543982 CEP85Q6P2H3 762 aa20.04■□□□□ 0.8
XRCC1-202ENST00000543982 DEFB132Q7Z7B7 95 aa20.04■□□□□ 0.8
XRCC1-202ENST00000543982 CAMKK2Q96RR4 588 aa20.04■□□□□ 0.8
XRCC1-202ENST00000543982 BCL2L12Q9HB09 334 aa20.04■□□□□ 0.8
XRCC1-202ENST00000543982 TNS1Q9HBL0 1735 aaKnown RBP20.04■□□□□ 0.8
XRCC1-202ENST00000543982 UTYO14607 1347 aa20.03■□□□□ 0.8
XRCC1-202ENST00000543982 GNAI2P04899 355 aa20.03■□□□□ 0.8
XRCC1-202ENST00000543982 GNAI3P08754 354 aa20.03■□□□□ 0.8
XRCC1-202ENST00000543982 UBTFL1P0CB47 393 aaPredicted RBP20.03■□□□□ 0.8
XRCC1-202ENST00000543982 CASP7P55210 303 aa20.03■□□□□ 0.8
XRCC1-202ENST00000543982 RTL5Q5HYW3 569 aaPredicted RBP20.03■□□□□ 0.8
XRCC1-202ENST00000543982 SYNE4Q8N205 404 aa20.03■□□□□ 0.8
XRCC1-202ENST00000543982 SUCLG2Q96I99 432 aa20.03■□□□□ 0.8
XRCC1-202ENST00000543982 C9orf78Q9NZ63 289 aaPredicted RBP20.03■□□□□ 0.8
XRCC1-202ENST00000543982 RTCBQ9Y3I0 505 aaKnown RBP20.03■□□□□ 0.8
XRCC1-202ENST00000543982 C4BP0C0L5 1744 aa20.03■□□□□ 0.8
XRCC1-202ENST00000543982 EPHA10Q5JZY3 1008 aa20.03■□□□□ 0.8
XRCC1-202ENST00000543982 TAF1LQ8IZX4 1826 aa20.03■□□□□ 0.8
XRCC1-202ENST00000543982 UBN2Q6ZU65 1347 aa20.02■□□□□ 0.8
XRCC1-202ENST00000543982 AK7Q96M32 723 aa20.02■□□□□ 0.8
XRCC1-202ENST00000543982 N4BP2Q86UW6 1770 aaPredicted RBP20.01■□□□□ 0.79
XRCC1-202ENST00000543982 A0A087WZG4 1122 aa20.01■□□□□ 0.79
XRCC1-202ENST00000543982 NPM2Q86SE8 214 aaKnown RBP20.01■□□□□ 0.79
XRCC1-202ENST00000543982 ZNF34Q8IZ26 560 aa20.01■□□□□ 0.79
XRCC1-202ENST00000543982 ANKRD44Q8N8A2 993 aa20.01■□□□□ 0.79
XRCC1-202ENST00000543982 CHMP4BQ9H444 224 aaKnown RBP20.01■□□□□ 0.79
XRCC1-202ENST00000543982 PNMA6EA0A0J9YXQ4 647 aa20.01■□□□□ 0.79
XRCC1-202ENST00000543982 H7C1W4 665 aa20.01■□□□□ 0.79
XRCC1-202ENST00000543982 TRIM28Q13263 835 aaKnown RBP20.01■□□□□ 0.79
XRCC1-202ENST00000543982 HDAC1Q13547 482 aaPredicted RBP20.01■□□□□ 0.79
XRCC1-202ENST00000543982 USPL1Q5W0Q7 1092 aa20.01■□□□□ 0.79
XRCC1-202ENST00000543982 UBE3BQ7Z3V4 1068 aa20.01■□□□□ 0.79
XRCC1-202ENST00000543982 NLRP10Q86W26 655 aa20.01■□□□□ 0.79
XRCC1-202ENST00000543982 CCDC191Q8NCU4 936 aa20■□□□□ 0.79
XRCC1-202ENST00000543982 AKT1S1Q96B36 256 aa20■□□□□ 0.79
XRCC1-202ENST00000543982 CWC25Q9NXE8 425 aaPredicted RBP20■□□□□ 0.79
XRCC1-202ENST00000543982 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.99■□□□□ 0.79
XRCC1-202ENST00000543982 NARFQ9UHQ1 456 aa19.99■□□□□ 0.79
XRCC1-202ENST00000543982 TRAPPC3LQ5T215 181 aa19.98■□□□□ 0.79
XRCC1-202ENST00000543982 FAM89AQ96GI7 184 aa19.98■□□□□ 0.79
XRCC1-202ENST00000543982 RWDD1Q9H446 243 aaPredicted RBP19.98■□□□□ 0.79
XRCC1-202ENST00000543982 ATP8B2P98198 1209 aa19.97■□□□□ 0.79
XRCC1-202ENST00000543982 SUSD4Q5VX71 490 aa19.97■□□□□ 0.79
XRCC1-202ENST00000543982 ANO8Q9HCE9 1232 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms