RNA–Protein interactions for RNA: ENST00000543957.5

ITM2C-209, Transcript of integral membrane protein 2C, humanhuman

TSL 5

Gene ITM2C, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-209ENST00000543957 CAPNS2Q96L46 248 aa16.67■□□□□ 0.26
ITM2C-209ENST00000543957 SLX4Q8IY92 1834 aa16.67■□□□□ 0.26
ITM2C-209ENST00000543957 STARD3NLO95772 234 aa16.66■□□□□ 0.26
ITM2C-209ENST00000543957 ECE1P42892 770 aa16.66■□□□□ 0.26
ITM2C-209ENST00000543957 CCDC93Q567U6 631 aa16.66■□□□□ 0.26
ITM2C-209ENST00000543957 CNBD1Q8NA66 436 aa16.66■□□□□ 0.26
ITM2C-209ENST00000543957 GPR101Q96P66 508 aaPredicted RBP16.66■□□□□ 0.26
ITM2C-209ENST00000543957 RNF123Q5XPI4 1314 aa16.66■□□□□ 0.26
ITM2C-209ENST00000543957 ADAMTSL1Q8N6G6 1762 aa16.65■□□□□ 0.26
ITM2C-209ENST00000543957 PAXIP1Q6ZW49 1069 aaPredicted RBP16.65■□□□□ 0.26
ITM2C-209ENST00000543957 C7orf43Q8WVR3 580 aa16.65■□□□□ 0.26
ITM2C-209ENST00000543957 PCGF6Q9BYE7 350 aa16.65■□□□□ 0.26
ITM2C-209ENST00000543957 DDX21Q9NR30 783 aaKnown RBP eCLIP16.65■□□□□ 0.26
ITM2C-209ENST00000543957 RNMTO43148 476 aaKnown RBP16.64■□□□□ 0.25
ITM2C-209ENST00000543957 ST5P78524 1137 aa16.64■□□□□ 0.25
ITM2C-209ENST00000543957 GRM1Q13255 1194 aa16.64■□□□□ 0.25
ITM2C-209ENST00000543957 SETDB2Q96T68 719 aa16.64■□□□□ 0.25
ITM2C-209ENST00000543957 ZNF277Q9NRM2 450 aaPredicted RBP16.64■□□□□ 0.25
ITM2C-209ENST00000543957 TSKSQ9UJT2 592 aa16.64■□□□□ 0.25
ITM2C-209ENST00000543957 TBC1D2BQ9UPU7 963 aa16.64■□□□□ 0.25
ITM2C-209ENST00000543957 FKBP4Q02790 459 aaKnown RBP eCLIP16.63■□□□□ 0.25
ITM2C-209ENST00000543957 CYP4F22Q6NT55 531 aa16.63■□□□□ 0.25
ITM2C-209ENST00000543957 MCOLN1Q9GZU1 580 aa16.63■□□□□ 0.25
ITM2C-209ENST00000543957 ZNF330Q9Y3S2 320 aaPredicted RBP16.63■□□□□ 0.25
ITM2C-209ENST00000543957 MRC1P22897 1456 aa16.62■□□□□ 0.25
ITM2C-209ENST00000543957 PDE4DIPQ5VU43 2346 aa16.62■□□□□ 0.25
ITM2C-209ENST00000543957 THSD7BQ9C0I4 1608 aa16.61■□□□□ 0.25
ITM2C-209ENST00000543957 FZD9O00144 591 aa16.61■□□□□ 0.25
ITM2C-209ENST00000543957 GPC2Q8N158 579 aa16.61■□□□□ 0.25
ITM2C-209ENST00000543957 CACNA1SQ13698 1873 aa16.61■□□□□ 0.25
ITM2C-209ENST00000543957 MAP2K2P36507 400 aa16.6■□□□□ 0.25
ITM2C-209ENST00000543957 FMR1Q06787 632 aaKnown RBP eCLIP16.6■□□□□ 0.25
ITM2C-209ENST00000543957 RTKN2Q8IZC4 609 aa16.6■□□□□ 0.25
ITM2C-209ENST00000543957 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
ITM2C-209ENST00000543957 ARFGEF2Q9Y6D5 1785 aa16.59■□□□□ 0.25
ITM2C-209ENST00000543957 NPR1P16066 1061 aa16.59■□□□□ 0.25
ITM2C-209ENST00000543957 IL13P35225 146 aa16.59■□□□□ 0.25
ITM2C-209ENST00000543957 IL6STP40189 918 aaPredicted RBP16.59■□□□□ 0.25
ITM2C-209ENST00000543957 POLR3GLQ9BT43 218 aa16.59■□□□□ 0.25
ITM2C-209ENST00000543957 CA12O43570 354 aa16.58■□□□□ 0.24
ITM2C-209ENST00000543957 CAMTA2O94983 1202 aa16.58■□□□□ 0.24
ITM2C-209ENST00000543957 IARSP41252 1262 aaKnown RBP16.58■□□□□ 0.24
ITM2C-209ENST00000543957 CST9Q5W186 159 aa16.58■□□□□ 0.24
ITM2C-209ENST00000543957 OLFM4Q6UX06 510 aa16.58■□□□□ 0.24
ITM2C-209ENST00000543957 NPM2Q86SE8 214 aaKnown RBP16.58■□□□□ 0.24
ITM2C-209ENST00000543957 TLL2Q9Y6L7 1015 aa16.58■□□□□ 0.24
ITM2C-209ENST00000543957 SCN7AQ01118 1682 aa16.58■□□□□ 0.24
ITM2C-209ENST00000543957 AOC2O75106 756 aa16.57■□□□□ 0.24
ITM2C-209ENST00000543957 DGKZQ13574 1117 aa16.57■□□□□ 0.24
ITM2C-209ENST00000543957 TEX13AQ9BXU3 409 aaPredicted RBP16.57■□□□□ 0.24
ITM2C-209ENST00000543957 LMOD1P29536 600 aaPredicted RBP16.56■□□□□ 0.24
ITM2C-209ENST00000543957 NBPF5PQ86XG9 351 aaPredicted RBP16.56■□□□□ 0.24
ITM2C-209ENST00000543957 SYNE4Q8N205 404 aa16.56■□□□□ 0.24
ITM2C-209ENST00000543957 JDP2Q8WYK2 163 aa16.56■□□□□ 0.24
ITM2C-209ENST00000543957 ZNF496Q96IT1 587 aaPredicted RBP16.56■□□□□ 0.24
ITM2C-209ENST00000543957 GJA3Q9Y6H8 435 aa16.56■□□□□ 0.24
ITM2C-209ENST00000543957 TRAF5O00463 557 aa16.55■□□□□ 0.24
ITM2C-209ENST00000543957 A1BGP04217 495 aa16.55■□□□□ 0.24
ITM2C-209ENST00000543957 MTHFSDQ2M296 383 aaKnown RBP16.55■□□□□ 0.24
ITM2C-209ENST00000543957 MORC1Q86VD1 984 aa16.55■□□□□ 0.24
ITM2C-209ENST00000543957 TNRC18O15417 2968 aaPredicted RBP16.54■□□□□ 0.24
ITM2C-209ENST00000543957 UBR2Q8IWV8 1755 aa16.54■□□□□ 0.24
ITM2C-209ENST00000543957 HEG1Q9ULI3 1381 aa16.54■□□□□ 0.24
ITM2C-209ENST00000543957 LTBP1Q14766 1721 aa16.54■□□□□ 0.24
ITM2C-209ENST00000543957 KLRG2A4D1S0 409 aaPredicted RBP16.54■□□□□ 0.24
ITM2C-209ENST00000543957 EPS15P42566 896 aa16.54■□□□□ 0.24
ITM2C-209ENST00000543957 EIF6P56537 245 aaKnown RBP16.54■□□□□ 0.24
ITM2C-209ENST00000543957 DZIP3Q86Y13 1208 aaKnown RBP16.54■□□□□ 0.24
ITM2C-209ENST00000543957 CASP8AP2Q9UKL3 1982 aa16.54■□□□□ 0.24
ITM2C-209ENST00000543957 HMOX1P09601 288 aa16.53■□□□□ 0.24
ITM2C-209ENST00000543957 BRPF1P55201 1214 aaPredicted RBP16.53■□□□□ 0.24
ITM2C-209ENST00000543957 ZNF790Q6PG37 636 aa16.53■□□□□ 0.24
ITM2C-209ENST00000543957 PANK3Q9H999 370 aa16.53■□□□□ 0.24
ITM2C-209ENST00000543957 SCNN1DP51172 638 aa16.52■□□□□ 0.24
ITM2C-209ENST00000543957 USP50Q70EL3 339 aaPredicted RBP16.52■□□□□ 0.24
ITM2C-209ENST00000543957 SAPCD2Q86UD0 394 aa16.52■□□□□ 0.24
ITM2C-209ENST00000543957 ALDH1B1P30837 517 aa16.51■□□□□ 0.23
ITM2C-209ENST00000543957 CLEC4GQ6UXB4 293 aa16.51■□□□□ 0.23
ITM2C-209ENST00000543957 TPTE2Q6XPS3 522 aa16.51■□□□□ 0.23
ITM2C-209ENST00000543957 PSMD1Q99460 953 aa16.51■□□□□ 0.23
ITM2C-209ENST00000543957 HHIPL1Q96JK4 782 aa16.5■□□□□ 0.23
ITM2C-209ENST00000543957 TRPM7Q96QT4 1865 aa16.5■□□□□ 0.23
ITM2C-209ENST00000543957 CELF2O95319 508 aaKnown RBP16.49■□□□□ 0.23
ITM2C-209ENST00000543957 TEFQ10587 303 aa16.49■□□□□ 0.23
ITM2C-209ENST00000543957 CIAPIN1Q6FI81 312 aa16.49■□□□□ 0.23
ITM2C-209ENST00000543957 FMNL2Q96PY5 1086 aa16.49■□□□□ 0.23
ITM2C-209ENST00000543957 ZNF652Q9Y2D9 606 aa16.49■□□□□ 0.23
ITM2C-209ENST00000543957 SOX10P56693 466 aa16.48■□□□□ 0.23
ITM2C-209ENST00000543957 PRPF38BQ5VTL8 546 aaKnown RBP16.48■□□□□ 0.23
ITM2C-209ENST00000543957 CLSPNQ9HAW4 1339 aa16.47■□□□□ 0.23
ITM2C-209ENST00000543957 SNED1Q8TER0 1413 aa16.47■□□□□ 0.23
ITM2C-209ENST00000543957 IL17REQ8NFR9 667 aa16.47■□□□□ 0.23
ITM2C-209ENST00000543957 NIP7Q9Y221 180 aaKnown RBP eCLIP16.47■□□□□ 0.23
ITM2C-209ENST00000543957 COL4A5P29400 1685 aa16.46■□□□□ 0.23
ITM2C-209ENST00000543957 FAM177BA6PVY3 158 aa16.46■□□□□ 0.23
ITM2C-209ENST00000543957 PIP4K2AP48426 406 aaPredicted RBP16.46■□□□□ 0.23
ITM2C-209ENST00000543957 CC2D2BQ6DHV5 1058 aa16.46■□□□□ 0.23
ITM2C-209ENST00000543957 LARGE2Q8N3Y3 721 aa16.46■□□□□ 0.23
ITM2C-209ENST00000543957 BCORQ6W2J9 1755 aa16.46■□□□□ 0.22
ITM2C-209ENST00000543957 ADARB2Q9NS39 739 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms