RNA–Protein interactions for RNA: ENST00000543419.5

ECHDC2-224, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-224ENST00000543419 FOXN1O15353 648 aa11.34□□□□□ -0.59
ECHDC2-224ENST00000543419 KCNQ3O43525 872 aa11.34□□□□□ -0.59
ECHDC2-224ENST00000543419 TTC5Q8N0Z6 440 aa11.34□□□□□ -0.59
ECHDC2-224ENST00000543419 CNKSR1Q969H4 720 aa11.34□□□□□ -0.59
ECHDC2-224ENST00000543419 TAF1DQ9H5J8 278 aaPredicted RBP11.34□□□□□ -0.59
ECHDC2-224ENST00000543419 SCN4AP35499 1836 aa11.34□□□□□ -0.59
ECHDC2-224ENST00000543419 GNAT3A8MTJ3 354 aa11.33□□□□□ -0.6
ECHDC2-224ENST00000543419 LDHDQ86WU2 507 aa11.33□□□□□ -0.6
ECHDC2-224ENST00000543419 CNBD1Q8NA66 436 aa11.33□□□□□ -0.6
ECHDC2-224ENST00000543419 MASTLQ96GX5 879 aa11.33□□□□□ -0.6
ECHDC2-224ENST00000543419 SETDB2Q96T68 719 aa11.33□□□□□ -0.6
ECHDC2-224ENST00000543419 ZNF219Q9P2Y4 722 aaPredicted RBP11.33□□□□□ -0.6
ECHDC2-224ENST00000543419 MKRN1Q9UHC7 482 aaKnown RBP11.33□□□□□ -0.6
ECHDC2-224ENST00000543419 USP16Q9Y5T5 823 aa11.33□□□□□ -0.6
ECHDC2-224ENST00000543419 RGL2O15211 777 aa11.32□□□□□ -0.6
ECHDC2-224ENST00000543419 SOGA3Q5TF21 947 aa11.32□□□□□ -0.6
ECHDC2-224ENST00000543419 CLEC4GQ6UXB4 293 aa11.32□□□□□ -0.6
ECHDC2-224ENST00000543419 GAS2L2Q8NHY3 880 aa11.32□□□□□ -0.6
ECHDC2-224ENST00000543419 PHACTR3Q96KR7 559 aa11.32□□□□□ -0.6
ECHDC2-224ENST00000543419 FMNL2Q96PY5 1086 aa11.32□□□□□ -0.6
ECHDC2-224ENST00000543419 PRDM10Q9NQV6 1147 aa11.32□□□□□ -0.6
ECHDC2-224ENST00000543419 CACNA1SQ13698 1873 aa11.32□□□□□ -0.6
ECHDC2-224ENST00000543419 PRAMEF22A3QJZ6 481 aa11.31□□□□□ -0.6
ECHDC2-224ENST00000543419 TEFQ10587 303 aa11.31□□□□□ -0.6
ECHDC2-224ENST00000543419 DZIP3Q86Y13 1208 aaKnown RBP11.31□□□□□ -0.6
ECHDC2-224ENST00000543419 WBP1LQ9NX94 342 aa11.31□□□□□ -0.6
ECHDC2-224ENST00000543419 ZNF541Q9H0D2 1346 aa11.31□□□□□ -0.6
ECHDC2-224ENST00000543419 IQCA1LA6NCM1 817 aa11.3□□□□□ -0.6
ECHDC2-224ENST00000543419 NBPF26B4DH59 902 aa11.3□□□□□ -0.6
ECHDC2-224ENST00000543419 FZD9O00144 591 aa11.3□□□□□ -0.6
ECHDC2-224ENST00000543419 VEGFBP49765 207 aa11.3□□□□□ -0.6
ECHDC2-224ENST00000543419 CC2D1BQ5T0F9 858 aaKnown RBP11.3□□□□□ -0.6
ECHDC2-224ENST00000543419 NBPF10Q6P3W6 841 aaKnown RBP11.3□□□□□ -0.6
ECHDC2-224ENST00000543419 OLFM4Q6UX06 510 aa11.3□□□□□ -0.6
ECHDC2-224ENST00000543419 NBPF15Q8N660 670 aa11.3□□□□□ -0.6
ECHDC2-224ENST00000543419 RSPH6AQ9H0K4 717 aa11.3□□□□□ -0.6
ECHDC2-224ENST00000543419 NPR1P16066 1061 aa11.29□□□□□ -0.6
ECHDC2-224ENST00000543419 PIP4K2AP48426 406 aaPredicted RBP11.29□□□□□ -0.6
ECHDC2-224ENST00000543419 ST5P78524 1137 aa11.29□□□□□ -0.6
ECHDC2-224ENST00000543419 FKBP4Q02790 459 aaKnown RBP eCLIP11.29□□□□□ -0.6
ECHDC2-224ENST00000543419 CCDC93Q567U6 631 aa11.29□□□□□ -0.6
ECHDC2-224ENST00000543419 COL4A5P29400 1685 aa11.29□□□□□ -0.6
ECHDC2-224ENST00000543419 RASSF10A6NK89 507 aa11.28□□□□□ -0.6
ECHDC2-224ENST00000543419 TMEM88BA6NKF7 163 aa11.28□□□□□ -0.6
ECHDC2-224ENST00000543419 BTBD11A6QL63 1104 aa11.28□□□□□ -0.6
ECHDC2-224ENST00000543419 CRY2Q49AN0 593 aa11.28□□□□□ -0.6
ECHDC2-224ENST00000543419 PCGF6Q9BYE7 350 aa11.28□□□□□ -0.6
ECHDC2-224ENST00000543419 ZNF277Q9NRM2 450 aaPredicted RBP11.28□□□□□ -0.6
ECHDC2-224ENST00000543419 ZNF330Q9Y3S2 320 aaPredicted RBP11.28□□□□□ -0.6
ECHDC2-224ENST00000543419 LTBP1Q14766 1721 aa11.27□□□□□ -0.61
ECHDC2-224ENST00000543419 NBPF5PQ86XG9 351 aaPredicted RBP11.27□□□□□ -0.61
ECHDC2-224ENST00000543419 THSD7BQ9C0I4 1608 aa11.27□□□□□ -0.61
ECHDC2-224ENST00000543419 U2SURPO15042 1029 aaKnown RBP11.26□□□□□ -0.61
ECHDC2-224ENST00000543419 SNRPA1P09661 255 aaKnown RBP11.26□□□□□ -0.61
ECHDC2-224ENST00000543419 PRKAR2BP31323 418 aa11.26□□□□□ -0.61
ECHDC2-224ENST00000543419 EPHX2P34913 555 aa11.26□□□□□ -0.61
ECHDC2-224ENST00000543419 CTCFP49711 727 aaPredicted RBP11.26□□□□□ -0.61
ECHDC2-224ENST00000543419 HLFQ16534 295 aa11.26□□□□□ -0.61
ECHDC2-224ENST00000543419 RTKN2Q8IZC4 609 aa11.26□□□□□ -0.61
ECHDC2-224ENST00000543419 PSMD1Q99460 953 aa11.26□□□□□ -0.61
ECHDC2-224ENST00000543419 HACL1Q9UJ83 578 aa11.26□□□□□ -0.61
ECHDC2-224ENST00000543419 HSPA8P11142 646 aaKnown RBP11.25□□□□□ -0.61
ECHDC2-224ENST00000543419 IARSP41252 1262 aaKnown RBP11.25□□□□□ -0.61
ECHDC2-224ENST00000543419 TPTE2Q6XPS3 522 aa11.25□□□□□ -0.61
ECHDC2-224ENST00000543419 CNTROBQ8N137 903 aa11.25□□□□□ -0.61
ECHDC2-224ENST00000543419 RNF123Q5XPI4 1314 aa11.25□□□□□ -0.61
ECHDC2-224ENST00000543419 ABCC12Q96J65 1359 aa11.25□□□□□ -0.61
ECHDC2-224ENST00000543419 LBX1P52954 281 aa11.24□□□□□ -0.61
ECHDC2-224ENST00000543419 MAP1SQ66K74 1059 aaPredicted RBP11.24□□□□□ -0.61
ECHDC2-224ENST00000543419 PNMA8AQ86V59 439 aaPredicted RBP11.24□□□□□ -0.61
ECHDC2-224ENST00000543419 GPC2Q8N158 579 aa11.24□□□□□ -0.61
ECHDC2-224ENST00000543419 SYNE4Q8N205 404 aa11.24□□□□□ -0.61
ECHDC2-224ENST00000543419 NIP7Q9Y221 180 aaKnown RBP eCLIP11.24□□□□□ -0.61
ECHDC2-224ENST00000543419 ZNF652Q9Y2D9 606 aa11.24□□□□□ -0.61
ECHDC2-224ENST00000543419 RIC1Q4ADV7 1423 aa11.24□□□□□ -0.61
ECHDC2-224ENST00000543419 ALDH1B1P30837 517 aa11.23□□□□□ -0.61
ECHDC2-224ENST00000543419 HOXA10P31260 410 aaPredicted RBP11.23□□□□□ -0.61
ECHDC2-224ENST00000543419 SCNN1DP51172 638 aa11.23□□□□□ -0.61
ECHDC2-224ENST00000543419 DEFB115Q30KQ5 88 aa11.23□□□□□ -0.61
ECHDC2-224ENST00000543419 EAPPQ56P03 285 aaPredicted RBP11.23□□□□□ -0.61
ECHDC2-224ENST00000543419 MCM10Q7L590 875 aa11.23□□□□□ -0.61
ECHDC2-224ENST00000543419 SLC51AQ86UW1 340 aa11.23□□□□□ -0.61
ECHDC2-224ENST00000543419 NPHP1O15259 732 aa11.22□□□□□ -0.61
ECHDC2-224ENST00000543419 HTATSF1O43719 755 aaKnown RBP11.22□□□□□ -0.61
ECHDC2-224ENST00000543419 SLC34A2O95436 690 aa11.22□□□□□ -0.61
ECHDC2-224ENST00000543419 DCTN1Q14203 1278 aa11.22□□□□□ -0.61
ECHDC2-224ENST00000543419 NPM2Q86SE8 214 aaKnown RBP11.22□□□□□ -0.61
ECHDC2-224ENST00000543419 WDR33Q9C0J8 1336 aaKnown RBP11.22□□□□□ -0.61
ECHDC2-224ENST00000543419 DDX21Q9NR30 783 aaKnown RBP eCLIP11.22□□□□□ -0.61
ECHDC2-224ENST00000543419 IBTKQ9P2D0 1353 aaPredicted RBP11.22□□□□□ -0.61
ECHDC2-224ENST00000543419 LAMB4A4D0S4 1761 aa11.21□□□□□ -0.61
ECHDC2-224ENST00000543419 UBN2Q6ZU65 1347 aa11.21□□□□□ -0.61
ECHDC2-224ENST00000543419 ERVV-1B6SEH8 477 aa11.21□□□□□ -0.61
ECHDC2-224ENST00000543419 FMR1Q06787 632 aaKnown RBP eCLIP11.21□□□□□ -0.61
ECHDC2-224ENST00000543419 CST9Q5W186 159 aa11.21□□□□□ -0.61
ECHDC2-224ENST00000543419 CC2D2BQ6DHV5 1058 aa11.21□□□□□ -0.61
ECHDC2-224ENST00000543419 AIDAQ96BJ3 306 aa11.21□□□□□ -0.61
ECHDC2-224ENST00000543419 ABHD8Q96I13 439 aa11.21□□□□□ -0.61
ECHDC2-224ENST00000543419 NUP98P52948 1817 aa11.21□□□□□ -0.62
ECHDC2-224ENST00000543419 EPS15P42566 896 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms