RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 SMIM5Q71RC9 77 aa7.49□□□□□ -1.21
ABCF1-207ENST00000542772 DZIP3Q86Y13 1208 aaKnown RBP7.49□□□□□ -1.21
ABCF1-207ENST00000542772 PI4KAP1Q8N8J0 262 aa7.49□□□□□ -1.21
ABCF1-207ENST00000542772 SLC16A10Q8TF71 515 aa7.49□□□□□ -1.21
ABCF1-207ENST00000542772 METTL22Q9BUU2 404 aaPredicted RBP7.49□□□□□ -1.21
ABCF1-207ENST00000542772 BCL2L12Q9HB09 334 aa7.49□□□□□ -1.21
ABCF1-207ENST00000542772 TFCP2L1Q9NZI6 479 aa7.49□□□□□ -1.21
ABCF1-207ENST00000542772 TBC1D2BQ9UPU7 963 aa7.49□□□□□ -1.21
ABCF1-207ENST00000542772 PNPLA7Q6ZV29 1317 aa7.49□□□□□ -1.21
ABCF1-207ENST00000542772 KIF16BQ96L93 1317 aa7.49□□□□□ -1.21
ABCF1-207ENST00000542772 COL15A1P39059 1388 aa7.48□□□□□ -1.21
ABCF1-207ENST00000542772 GYS1P13807 737 aa7.48□□□□□ -1.21
ABCF1-207ENST00000542772 RFC4P35249 363 aa7.48□□□□□ -1.21
ABCF1-207ENST00000542772 TCIRG1Q13488 830 aa7.48□□□□□ -1.21
ABCF1-207ENST00000542772 HLFQ16534 295 aa7.48□□□□□ -1.21
ABCF1-207ENST00000542772 ZKSCAN2Q63HK3 967 aa7.48□□□□□ -1.21
ABCF1-207ENST00000542772 INTS3Q68E01 1043 aaKnown RBP7.48□□□□□ -1.21
ABCF1-207ENST00000542772 RIC3Q7Z5B4 369 aa7.48□□□□□ -1.21
ABCF1-207ENST00000542772 NPM2Q86SE8 214 aaKnown RBP7.48□□□□□ -1.21
ABCF1-207ENST00000542772 ZNF34Q8IZ26 560 aa7.48□□□□□ -1.21
ABCF1-207ENST00000542772 DNAAF4Q8WXU2 420 aa7.48□□□□□ -1.21
ABCF1-207ENST00000542772 ISCA1Q9BUE6 129 aa7.48□□□□□ -1.21
ABCF1-207ENST00000542772 BCL2L13Q9BXK5 485 aa7.48□□□□□ -1.21
ABCF1-207ENST00000542772 API5Q9BZZ5 524 aaKnown RBP7.48□□□□□ -1.21
ABCF1-207ENST00000542772 USP42Q9H9J4 1324 aaKnown RBP7.48□□□□□ -1.21
ABCF1-207ENST00000542772 NUP98P52948 1817 aa7.48□□□□□ -1.21
ABCF1-207ENST00000542772 ADCY9O60503 1353 aa7.47□□□□□ -1.21
ABCF1-207ENST00000542772 ZPR1O75312 459 aa7.47□□□□□ -1.21
ABCF1-207ENST00000542772 CENPBP07199 599 aaPredicted RBP7.47□□□□□ -1.21
ABCF1-207ENST00000542772 MS4A1P11836 297 aa7.47□□□□□ -1.21
ABCF1-207ENST00000542772 TRIM27P14373 513 aa7.47□□□□□ -1.21
ABCF1-207ENST00000542772 FKBP5Q13451 457 aaPredicted RBP7.47□□□□□ -1.21
ABCF1-207ENST00000542772 HSP90AB3PQ58FF7 597 aa7.47□□□□□ -1.21
ABCF1-207ENST00000542772 BEND3Q5T5X7 828 aa7.47□□□□□ -1.21
ABCF1-207ENST00000542772 USPL1Q5W0Q7 1092 aa7.47□□□□□ -1.21
ABCF1-207ENST00000542772 NLGN1Q8N2Q7 840 aa7.47□□□□□ -1.21
ABCF1-207ENST00000542772 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.47□□□□□ -1.21
ABCF1-207ENST00000542772 MAP3K2Q9Y2U5 619 aa7.47□□□□□ -1.21
ABCF1-207ENST00000542772 SUPT16HQ9Y5B9 1047 aaKnown RBP7.47□□□□□ -1.21
ABCF1-207ENST00000542772 TUBGCP6Q96RT7 1819 aa7.47□□□□□ -1.21
ABCF1-207ENST00000542772 F6X3S4 739 aa7.46□□□□□ -1.22
ABCF1-207ENST00000542772 ALDH1L1O75891 902 aa7.46□□□□□ -1.22
ABCF1-207ENST00000542772 IGKV5-2P06315 115 aa7.46□□□□□ -1.22
ABCF1-207ENST00000542772 KIF6Q6ZMV9 814 aa7.46□□□□□ -1.22
ABCF1-207ENST00000542772 DZIP1LQ8IYY4 767 aaKnown RBP7.46□□□□□ -1.22
ABCF1-207ENST00000542772 CCDC191Q8NCU4 936 aa7.46□□□□□ -1.22
ABCF1-207ENST00000542772 LINS1Q8NG48 757 aa7.46□□□□□ -1.22
ABCF1-207ENST00000542772 FRAT1Q92837 279 aaPredicted RBP7.46□□□□□ -1.22
ABCF1-207ENST00000542772 PDGFDQ9GZP0 370 aaPredicted RBP7.46□□□□□ -1.22
ABCF1-207ENST00000542772 SRP68Q9UHB9 627 aaKnown RBP7.46□□□□□ -1.22
ABCF1-207ENST00000542772 COL24A1Q17RW2 1714 aa7.46□□□□□ -1.22
ABCF1-207ENST00000542772 ABCC4O15439 1325 aa7.46□□□□□ -1.22
ABCF1-207ENST00000542772 ATP10DQ9P241 1426 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 C4AP0C0L4 1744 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 NEURL1BA8MQ27 555 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 H7C1W4 665 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 ZBTB7BO15156 539 aaPredicted RBP7.45□□□□□ -1.22
ABCF1-207ENST00000542772 PLIN1O60240 522 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 PHF14O94880 888 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 CCT4P50991 539 aaKnown RBP7.45□□□□□ -1.22
ABCF1-207ENST00000542772 RRP1P56182 461 aaKnown RBP7.45□□□□□ -1.22
ABCF1-207ENST00000542772 FKBP8Q14318 412 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 PARP10Q53GL7 1025 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 SLC10A5Q5PT55 438 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 TBC1D9BQ66K14 1250 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 NLRP10Q86W26 655 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 ZBTB3Q9H5J0 574 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 TNNQ9UQP3 1299 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 ZNF652Q9Y2D9 606 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 ZNF330Q9Y3S2 320 aaPredicted RBP7.45□□□□□ -1.22
ABCF1-207ENST00000542772 BCORQ6W2J9 1755 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 UTYO14607 1347 aa7.45□□□□□ -1.22
ABCF1-207ENST00000542772 ARFGEF2Q9Y6D5 1785 aa7.44□□□□□ -1.22
ABCF1-207ENST00000542772 RLBP1P12271 317 aa7.44□□□□□ -1.22
ABCF1-207ENST00000542772 CASP7P55210 303 aa7.44□□□□□ -1.22
ABCF1-207ENST00000542772 NEXNQ0ZGT2 675 aa7.44□□□□□ -1.22
ABCF1-207ENST00000542772 GCKRQ14397 625 aa7.44□□□□□ -1.22
ABCF1-207ENST00000542772 NFIXQ14938 502 aa7.44□□□□□ -1.22
ABCF1-207ENST00000542772 R3HDM1Q15032 1099 aaKnown RBP7.44□□□□□ -1.22
ABCF1-207ENST00000542772 SUSD4Q5VX71 490 aa7.44□□□□□ -1.22
ABCF1-207ENST00000542772 ARXQ96QS3 562 aa7.44□□□□□ -1.22
ABCF1-207ENST00000542772 MYD88Q99836 296 aa7.44□□□□□ -1.22
ABCF1-207ENST00000542772 SRCIN1Q9C0H9 1055 aa7.44□□□□□ -1.22
ABCF1-207ENST00000542772 USP44Q9H0E7 712 aa7.44□□□□□ -1.22
ABCF1-207ENST00000542772 PXDNLA1KZ92 1463 aa7.43□□□□□ -1.22
ABCF1-207ENST00000542772 ATP5J2-PTCD1G3V325 749 aa7.43□□□□□ -1.22
ABCF1-207ENST00000542772 POLRMTO00411 1230 aaKnown RBP7.43□□□□□ -1.22
ABCF1-207ENST00000542772 PCCAP05165 728 aaPredicted RBP7.43□□□□□ -1.22
ABCF1-207ENST00000542772 CWF19L2Q2TBE0 894 aaKnown RBP7.43□□□□□ -1.22
ABCF1-207ENST00000542772 C20orf194Q5TEA3 1177 aa7.43□□□□□ -1.22
ABCF1-207ENST00000542772 TPTE2Q6XPS3 522 aa7.43□□□□□ -1.22
ABCF1-207ENST00000542772 TMEM57Q8N5G2 664 aa7.43□□□□□ -1.22
ABCF1-207ENST00000542772 CLUAP1Q96AJ1 413 aa7.43□□□□□ -1.22
ABCF1-207ENST00000542772 SETDB2Q96T68 719 aa7.43□□□□□ -1.22
ABCF1-207ENST00000542772 SGIP1Q9BQI5 828 aa7.43□□□□□ -1.22
ABCF1-207ENST00000542772 MTFR1LQ9H019 292 aa7.43□□□□□ -1.22
ABCF1-207ENST00000542772 NIP7Q9Y221 180 aaKnown RBP eCLIP7.43□□□□□ -1.22
ABCF1-207ENST00000542772 UBN2Q6ZU65 1347 aa7.43□□□□□ -1.22
ABCF1-207ENST00000542772 CASZ1Q86V15 1759 aa7.43□□□□□ -1.22
ABCF1-207ENST00000542772 SCN7AQ01118 1682 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms