RNA–Protein interactions for RNA: ENST00000541973.5

RAB6A-209, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB6A, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-209ENST00000541973 IL16Q14005 1332 aa12.25□□□□□ -0.45
RAB6A-209ENST00000541973 SIPA1L3O60292 1781 aaPredicted RBP12.25□□□□□ -0.45
RAB6A-209ENST00000541973 KIF3CO14782 793 aa12.24□□□□□ -0.45
RAB6A-209ENST00000541973 GNAI1P63096 354 aa12.24□□□□□ -0.45
RAB6A-209ENST00000541973 TTC5Q8N0Z6 440 aa12.24□□□□□ -0.45
RAB6A-209ENST00000541973 UPF1Q92900 1129 aaKnown RBP eCLIP12.24□□□□□ -0.45
RAB6A-209ENST00000541973 TNS1Q9HBL0 1735 aaKnown RBP12.23□□□□□ -0.45
RAB6A-209ENST00000541973 PDE4AP27815 886 aa12.23□□□□□ -0.45
RAB6A-209ENST00000541973 LARP6Q9BRS8 491 aaKnown RBP12.23□□□□□ -0.45
RAB6A-209ENST00000541973 IFT57Q9NWB7 429 aa12.23□□□□□ -0.45
RAB6A-209ENST00000541973 RGPD3A6NKT7 1758 aaPredicted RBP12.23□□□□□ -0.45
RAB6A-209ENST00000541973 RGPD4Q7Z3J3 1758 aa12.23□□□□□ -0.45
RAB6A-209ENST00000541973 HNRNPUQ00839 825 aaKnown RBP eCLIP12.22□□□□□ -0.45
RAB6A-209ENST00000541973 MFSD10Q14728 455 aa12.22□□□□□ -0.45
RAB6A-209ENST00000541973 SLC27A3Q5K4L6 730 aa12.22□□□□□ -0.45
RAB6A-209ENST00000541973 ZNF790Q6PG37 636 aa12.22□□□□□ -0.45
RAB6A-209ENST00000541973 CRISPLD2Q9H0B8 497 aa12.22□□□□□ -0.45
RAB6A-209ENST00000541973 ATG3Q9NT62 314 aa12.22□□□□□ -0.45
RAB6A-209ENST00000541973 SALL2Q9Y467 1007 aaPredicted RBP12.22□□□□□ -0.45
RAB6A-209ENST00000541973 PALLDQ8WX93 1383 aa12.21□□□□□ -0.45
RAB6A-209ENST00000541973 CHL1O00533 1208 aa12.21□□□□□ -0.45
RAB6A-209ENST00000541973 VARS2Q5ST30 1063 aaKnown RBP12.21□□□□□ -0.45
RAB6A-209ENST00000541973 THUMPD2Q9BTF0 503 aaKnown RBP12.21□□□□□ -0.45
RAB6A-209ENST00000541973 TSPYL4Q9UJ04 414 aa12.21□□□□□ -0.45
RAB6A-209ENST00000541973 ASAP1Q9ULH1 1129 aa12.21□□□□□ -0.45
RAB6A-209ENST00000541973 PTF1AQ7RTS3 328 aa12.2□□□□□ -0.46
RAB6A-209ENST00000541973 FMNL2Q96PY5 1086 aa12.2□□□□□ -0.46
RAB6A-209ENST00000541973 TEX13AQ9BXU3 409 aaPredicted RBP12.2□□□□□ -0.46
RAB6A-209ENST00000541973 CHMP4AQ9BY43 222 aa12.2□□□□□ -0.46
RAB6A-209ENST00000541973 MYH16Q9H6N6 1097 aa12.2□□□□□ -0.46
RAB6A-209ENST00000541973 LAS1LQ9Y4W2 734 aaKnown RBP12.2□□□□□ -0.46
RAB6A-209ENST00000541973 LY75O60449 1722 aa12.2□□□□□ -0.46
RAB6A-209ENST00000541973 PAPPAQ13219 1627 aa12.19□□□□□ -0.46
RAB6A-209ENST00000541973 ZNF521Q96K83 1311 aa12.19□□□□□ -0.46
RAB6A-209ENST00000541973 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
RAB6A-209ENST00000541973 SOCS7O14512 581 aa12.19□□□□□ -0.46
RAB6A-209ENST00000541973 ZNF853P0CG23 659 aa12.19□□□□□ -0.46
RAB6A-209ENST00000541973 SIK1P57059 783 aa12.19□□□□□ -0.46
RAB6A-209ENST00000541973 SLC39A6Q13433 755 aa12.19□□□□□ -0.46
RAB6A-209ENST00000541973 CAMKK2Q96RR4 588 aa12.19□□□□□ -0.46
RAB6A-209ENST00000541973 ZNF831Q5JPB2 1677 aa12.19□□□□□ -0.46
RAB6A-209ENST00000541973 KDM3BQ7LBC6 1761 aa12.18□□□□□ -0.46
RAB6A-209ENST00000541973 UBR2Q8IWV8 1755 aa12.18□□□□□ -0.46
RAB6A-209ENST00000541973 ZBED9Q6R2W3 1325 aa12.18□□□□□ -0.46
RAB6A-209ENST00000541973 E9PSI1 815 aa12.18□□□□□ -0.46
RAB6A-209ENST00000541973 PTCD1O75127 700 aaKnown RBP12.18□□□□□ -0.46
RAB6A-209ENST00000541973 EN1Q05925 392 aaPredicted RBP12.18□□□□□ -0.46
RAB6A-209ENST00000541973 TXNRD1Q16881 649 aa12.18□□□□□ -0.46
RAB6A-209ENST00000541973 CCNL1Q9UK58 526 aaPredicted RBP12.18□□□□□ -0.46
RAB6A-209ENST00000541973 SOS1Q07889 1333 aaPredicted RBP12.17□□□□□ -0.46
RAB6A-209ENST00000541973 SENP3-EIF4A1A0A087X0R7 540 aa12.17□□□□□ -0.46
RAB6A-209ENST00000541973 C2orf72A6NCS6 295 aa12.17□□□□□ -0.46
RAB6A-209ENST00000541973 SNRPA1P09661 255 aaKnown RBP12.17□□□□□ -0.46
RAB6A-209ENST00000541973 ATP6V1AP38606 617 aa12.17□□□□□ -0.46
RAB6A-209ENST00000541973 EIF4A1P60842 406 aaKnown RBP12.17□□□□□ -0.46
RAB6A-209ENST00000541973 ZNF496Q96IT1 587 aaPredicted RBP12.17□□□□□ -0.46
RAB6A-209ENST00000541973 MIS18AQ9NYP9 233 aa12.17□□□□□ -0.46
RAB6A-209ENST00000541973 HEG1Q9ULI3 1381 aa12.17□□□□□ -0.46
RAB6A-209ENST00000541973 STARD3NLO95772 234 aa12.16□□□□□ -0.46
RAB6A-209ENST00000541973 HOXB7P09629 217 aa12.16□□□□□ -0.46
RAB6A-209ENST00000541973 EZH2Q15910 746 aaKnown RBP12.16□□□□□ -0.46
RAB6A-209ENST00000541973 ARSIQ5FYB1 569 aa12.16□□□□□ -0.46
RAB6A-209ENST00000541973 DEFB132Q7Z7B7 95 aa12.16□□□□□ -0.46
RAB6A-209ENST00000541973 ZNF687Q8N1G0 1237 aa12.16□□□□□ -0.46
RAB6A-209ENST00000541973 MBIPQ9NS73 344 aa12.16□□□□□ -0.46
RAB6A-209ENST00000541973 SEMA3EO15041 775 aa12.15□□□□□ -0.46
RAB6A-209ENST00000541973 NBPF14Q5TI25 921 aa12.15□□□□□ -0.46
RAB6A-209ENST00000541973 DDX27Q96GQ7 796 aaKnown RBP12.15□□□□□ -0.46
RAB6A-209ENST00000541973 KCPQ6ZWJ8 1503 aa12.15□□□□□ -0.46
RAB6A-209ENST00000541973 CICQ96RK0 1608 aaPredicted RBP12.15□□□□□ -0.47
RAB6A-209ENST00000541973 TESPA1A2RU30 521 aaPredicted RBP12.14□□□□□ -0.47
RAB6A-209ENST00000541973 KCNQ3O43525 872 aa12.14□□□□□ -0.47
RAB6A-209ENST00000541973 GIGYF1O75420 1035 aaPredicted RBP12.14□□□□□ -0.47
RAB6A-209ENST00000541973 SLFN5Q08AF3 891 aa12.14□□□□□ -0.47
RAB6A-209ENST00000541973 RC3H1Q5TC82 1133 aaKnown RBP12.14□□□□□ -0.47
RAB6A-209ENST00000541973 RREB1Q92766 1687 aa12.13□□□□□ -0.47
RAB6A-209ENST00000541973 TAF1LQ8IZX4 1826 aa12.13□□□□□ -0.47
RAB6A-209ENST00000541973 FANCIQ9NVI1 1328 aa12.12□□□□□ -0.47
RAB6A-209ENST00000541973 CAMK2BQ13554 666 aa12.12□□□□□ -0.47
RAB6A-209ENST00000541973 DNAJC10Q8IXB1 793 aa12.12□□□□□ -0.47
RAB6A-209ENST00000541973 TRMT2AQ8IZ69 625 aaKnown RBP12.12□□□□□ -0.47
RAB6A-209ENST00000541973 KHSRPQ92945 711 aaKnown RBP eCLIP12.12□□□□□ -0.472e-7■■■□□ 16.4
RAB6A-209ENST00000541973 SLC4A9Q96Q91 983 aa12.12□□□□□ -0.47
RAB6A-209ENST00000541973 LRRC4BQ9NT99 713 aa12.12□□□□□ -0.47
RAB6A-209ENST00000541973 ARIH1Q9Y4X5 557 aaPredicted RBP12.12□□□□□ -0.47
RAB6A-209ENST00000541973 C5P01031 1676 aa12.12□□□□□ -0.47
RAB6A-209ENST00000541973 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
RAB6A-209ENST00000541973 CNTNAP4Q9C0A0 1308 aa12.11□□□□□ -0.47
RAB6A-209ENST00000541973 TULP1O00294 542 aaPredicted RBP12.11□□□□□ -0.47
RAB6A-209ENST00000541973 CT47B1P0C2W7 299 aaPredicted RBP12.11□□□□□ -0.47
RAB6A-209ENST00000541973 CYP19A1P11511 503 aaPredicted RBP12.11□□□□□ -0.47
RAB6A-209ENST00000541973 ITPK1Q13572 414 aa12.11□□□□□ -0.47
RAB6A-209ENST00000541973 DUSP27Q5VZP5 1158 aa12.11□□□□□ -0.47
RAB6A-209ENST00000541973 NPM2Q86SE8 214 aaKnown RBP12.11□□□□□ -0.47
RAB6A-209ENST00000541973 FLAD1Q8NFF5 587 aa12.11□□□□□ -0.47
RAB6A-209ENST00000541973 TSR2Q969E8 191 aaKnown RBP12.11□□□□□ -0.47
RAB6A-209ENST00000541973 ZNF428Q96B54 188 aa12.11□□□□□ -0.47
RAB6A-209ENST00000541973 STK32BQ9NY57 414 aa12.11□□□□□ -0.47
RAB6A-209ENST00000541973 COL5A3P25940 1745 aaPredicted RBP12.11□□□□□ -0.47
RAB6A-209ENST00000541973 LINC00116Q8NCU8 138 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms