RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 POLRMTO00411 1230 aaKnown RBP28.5■■■□□ 2.15
TRIM65-202ENST00000540128 EXOSC9Q06265 439 aaKnown RBP28.5■■■□□ 2.15
TRIM65-202ENST00000540128 CCDC30Q5VVM6 783 aa28.5■■■□□ 2.15
TRIM65-202ENST00000540128 SYT17Q9BSW7 474 aa28.5■■■□□ 2.15
TRIM65-202ENST00000540128 VAMP4O75379 141 aa28.49■■■□□ 2.15
TRIM65-202ENST00000540128 TBC1D9BQ66K14 1250 aa28.49■■■□□ 2.15
TRIM65-202ENST00000540128 HYPKQ9NX55 129 aa28.49■■■□□ 2.15
TRIM65-202ENST00000540128 ZNF652Q9Y2D9 606 aa28.49■■■□□ 2.15
TRIM65-202ENST00000540128 CD2APQ9Y5K6 639 aa28.49■■■□□ 2.15
TRIM65-202ENST00000540128 SCN7AQ01118 1682 aa28.48■■■□□ 2.15
TRIM65-202ENST00000540128 KIF6Q6ZMV9 814 aa28.48■■■□□ 2.15
TRIM65-202ENST00000540128 COPS6Q7L5N1 327 aa28.48■■■□□ 2.15
TRIM65-202ENST00000540128 TRMT2AQ8IZ69 625 aaKnown RBP28.48■■■□□ 2.15
TRIM65-202ENST00000540128 XAGE3Q8WTP9 111 aa28.47■■■□□ 2.15
TRIM65-202ENST00000540128 HLFQ16534 295 aa28.46■■■□□ 2.15
TRIM65-202ENST00000540128 BCORQ6W2J9 1755 aa28.45■■■□□ 2.15
TRIM65-202ENST00000540128 CDCA7LQ96GN5 454 aa28.45■■■□□ 2.14
TRIM65-202ENST00000540128 SETDB2Q96T68 719 aa28.44■■■□□ 2.14
TRIM65-202ENST00000540128 SERPINB2P05120 415 aa28.43■■■□□ 2.14
TRIM65-202ENST00000540128 HNRNPUQ00839 825 aaKnown RBP eCLIP28.43■■■□□ 2.14
TRIM65-202ENST00000540128 GIGYF2Q6Y7W6 1299 aaKnown RBP28.43■■■□□ 2.14
TRIM65-202ENST00000540128 BICDL1Q6ZP65 573 aa28.43■■■□□ 2.14
TRIM65-202ENST00000540128 ZBTB3Q9H5J0 574 aa28.42■■■□□ 2.14
TRIM65-202ENST00000540128 AIMP1Q12904 312 aaKnown RBP28.41■■■□□ 2.14
TRIM65-202ENST00000540128 CARMIL3Q8ND23 1372 aa28.4■■■□□ 2.14
TRIM65-202ENST00000540128 ANKRD13DQ6ZTN6 518 aa28.4■■■□□ 2.14
TRIM65-202ENST00000540128 PLBD2Q8NHP8 589 aa28.4■■■□□ 2.14
TRIM65-202ENST00000540128 STK31Q9BXU1 1019 aa28.4■■■□□ 2.14
TRIM65-202ENST00000540128 C10orf71Q711Q0 1435 aa28.4■■■□□ 2.14
TRIM65-202ENST00000540128 ZNF34Q8IZ26 560 aa28.39■■■□□ 2.14
TRIM65-202ENST00000540128 KLHL34Q8N239 644 aa28.39■■■□□ 2.14
TRIM65-202ENST00000540128 ATP10DQ9P241 1426 aa28.39■■■□□ 2.14
TRIM65-202ENST00000540128 NIP7Q9Y221 180 aaKnown RBP eCLIP28.39■■■□□ 2.14
TRIM65-202ENST00000540128 PHAXQ9H814 394 aaKnown RBP28.38■■■□□ 2.13
TRIM65-202ENST00000540128 TGFB2P61812 414 aa28.37■■■□□ 2.13
TRIM65-202ENST00000540128 NLGN2Q8NFZ4 835 aa28.37■■■□□ 2.13
TRIM65-202ENST00000540128 NRXN2Q9P2S2 1712 aa28.37■■■□□ 2.13
TRIM65-202ENST00000540128 NUP98P52948 1817 aa28.36■■■□□ 2.13
TRIM65-202ENST00000540128 SLC4A2P04920 1241 aa28.36■■■□□ 2.13
TRIM65-202ENST00000540128 HSP90AB3PQ58FF7 597 aa28.36■■■□□ 2.13
TRIM65-202ENST00000540128 KIF13BQ9NQT8 1826 aa28.35■■■□□ 2.13
TRIM65-202ENST00000540128 TCERG1O14776 1098 aaKnown RBP28.35■■■□□ 2.13
TRIM65-202ENST00000540128 TCIRG1Q13488 830 aa28.35■■■□□ 2.13
TRIM65-202ENST00000540128 PRR5LQ6MZQ0 368 aa28.34■■■□□ 2.13
TRIM65-202ENST00000540128 AFDNP55196 1824 aaKnown RBP28.34■■■□□ 2.13
TRIM65-202ENST00000540128 TPTE2Q6XPS3 522 aa28.33■■■□□ 2.13
TRIM65-202ENST00000540128 ZNF428Q96B54 188 aa28.33■■■□□ 2.13
TRIM65-202ENST00000540128 ZBED9Q6R2W3 1325 aa28.33■■■□□ 2.13
TRIM65-202ENST00000540128 CACNA1FO60840 1977 aa28.32■■■□□ 2.12
TRIM65-202ENST00000540128 NBPF5PQ86XG9 351 aaPredicted RBP28.32■■■□□ 2.12
TRIM65-202ENST00000540128 CT47B1P0C2W7 299 aaPredicted RBP28.31■■■□□ 2.12
TRIM65-202ENST00000540128 PARP10Q53GL7 1025 aa28.31■■■□□ 2.12
TRIM65-202ENST00000540128 G2E3Q7L622 706 aa28.31■■■□□ 2.12
TRIM65-202ENST00000540128 CNBD1Q8NA66 436 aa28.31■■■□□ 2.12
TRIM65-202ENST00000540128 BRIP1Q9BX63 1249 aa28.31■■■□□ 2.12
TRIM65-202ENST00000540128 UBN2Q6ZU65 1347 aa28.31■■■□□ 2.12
TRIM65-202ENST00000540128 IBTKQ9P2D0 1353 aaPredicted RBP28.3■■■□□ 2.12
TRIM65-202ENST00000540128 DDX58O95786 925 aaKnown RBP28.3■■■□□ 2.12
TRIM65-202ENST00000540128 GPTP24298 496 aa28.3■■■□□ 2.12
TRIM65-202ENST00000540128 TRIM28Q13263 835 aaKnown RBP28.29■■■□□ 2.12
TRIM65-202ENST00000540128 SUSD4Q5VX71 490 aa28.29■■■□□ 2.12
TRIM65-202ENST00000540128 KSR2Q6VAB6 950 aa28.29■■■□□ 2.12
TRIM65-202ENST00000540128 RIC3Q7Z5B4 369 aa28.29■■■□□ 2.12
TRIM65-202ENST00000540128 ISCA1Q9BUE6 129 aa28.29■■■□□ 2.12
TRIM65-202ENST00000540128 NYXQ9GZU5 481 aa28.29■■■□□ 2.12
TRIM65-202ENST00000540128 PXDNLA1KZ92 1463 aa28.28■■■□□ 2.12
TRIM65-202ENST00000540128 FLIIQ13045 1269 aa28.28■■■□□ 2.12
TRIM65-202ENST00000540128 NLRP10Q86W26 655 aa28.27■■■□□ 2.12
TRIM65-202ENST00000540128 A0A0G2JLW4 131 aa28.26■■■□□ 2.11
TRIM65-202ENST00000540128 DPEP1P16444 411 aa28.26■■■□□ 2.11
TRIM65-202ENST00000540128 KCNA3P22001 575 aa28.26■■■□□ 2.11
TRIM65-202ENST00000540128 ST5P78524 1137 aa28.26■■■□□ 2.11
TRIM65-202ENST00000540128 PPP1R42Q7Z4L9 355 aa28.26■■■□□ 2.11
TRIM65-202ENST00000540128 PDZRN3Q9UPQ7 1066 aa28.26■■■□□ 2.11
TRIM65-202ENST00000540128 PI4KAP2A4QPH2 592 aa28.25■■■□□ 2.11
TRIM65-202ENST00000540128 NTSR2O95665 410 aa28.25■■■□□ 2.11
TRIM65-202ENST00000540128 PI4KAP1Q8N8J0 262 aa28.25■■■□□ 2.11
TRIM65-202ENST00000540128 METTL22Q9BUU2 404 aaPredicted RBP28.25■■■□□ 2.11
TRIM65-202ENST00000540128 ADCY9O60503 1353 aa28.24■■■□□ 2.11
TRIM65-202ENST00000540128 PDE6BP35913 854 aa28.24■■■□□ 2.11
TRIM65-202ENST00000540128 CCDC24Q8N4L8 307 aa28.24■■■□□ 2.11
TRIM65-202ENST00000540128 UTP14AQ9BVJ6 771 aaKnown RBP28.24■■■□□ 2.11
TRIM65-202ENST00000540128 MAP3K2Q9Y2U5 619 aa28.24■■■□□ 2.11
TRIM65-202ENST00000540128 KIAA1551Q9HCM1 1747 aa28.23■■■□□ 2.11
TRIM65-202ENST00000540128 RNF123Q5XPI4 1314 aa28.23■■■□□ 2.11
TRIM65-202ENST00000540128 KLRG2A4D1S0 409 aaPredicted RBP28.23■■■□□ 2.11
TRIM65-202ENST00000540128 FAM177BA6PVY3 158 aa28.23■■■□□ 2.11
TRIM65-202ENST00000540128 NPHP1O15259 732 aa28.23■■■□□ 2.11
TRIM65-202ENST00000540128 ALDH1L2Q3SY69 923 aa28.23■■■□□ 2.11
TRIM65-202ENST00000540128 SSH1Q8WYL5 1049 aa28.23■■■□□ 2.11
TRIM65-202ENST00000540128 MRPL50Q8N5N7 158 aaKnown RBP28.22■■■□□ 2.11
TRIM65-202ENST00000540128 ATP5J2-PTCD1G3V325 749 aa28.21■■■□□ 2.11
TRIM65-202ENST00000540128 GTF2E1P29083 439 aaPredicted RBP28.21■■■□□ 2.11
TRIM65-202ENST00000540128 CHRNA5P30532 468 aa28.21■■■□□ 2.11
TRIM65-202ENST00000540128 SLC10A5Q5PT55 438 aa28.21■■■□□ 2.11
TRIM65-202ENST00000540128 ANKRD36CQ5JPF3 1778 aa28.2■■■□□ 2.11
TRIM65-202ENST00000540128 FKBP5Q13451 457 aaPredicted RBP28.2■■■□□ 2.1
TRIM65-202ENST00000540128 ERFEQ4G0M1 354 aa28.2■■■□□ 2.1
TRIM65-202ENST00000540128 NUTM1Q86Y26 1132 aa28.2■■■□□ 2.1
TRIM65-202ENST00000540128 ARFGEF2Q9Y6D5 1785 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms