RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 PRAMEF22A3QJZ6 481 aa20.17■□□□□ 0.82
UBE3B-211ENST00000539843 C21orf2O43822 256 aa20.17■□□□□ 0.82
UBE3B-211ENST00000539843 CCDC24Q8N4L8 307 aa20.17■□□□□ 0.82
UBE3B-211ENST00000539843 ZNF219Q9P2Y4 722 aaPredicted RBP20.17■□□□□ 0.82
UBE3B-211ENST00000539843 KIF6Q6ZMV9 814 aa20.16■□□□□ 0.82
UBE3B-211ENST00000539843 SMC1BQ8NDV3 1235 aa20.16■□□□□ 0.82
UBE3B-211ENST00000539843 TAOK3Q9H2K8 898 aa20.16■□□□□ 0.82
UBE3B-211ENST00000539843 TNRC6CQ9HCJ0 1690 aaKnown RBP20.16■□□□□ 0.82
UBE3B-211ENST00000539843 BCORQ6W2J9 1755 aa20.16■□□□□ 0.82
UBE3B-211ENST00000539843 GLTPD2A6NH11 291 aa20.15■□□□□ 0.82
UBE3B-211ENST00000539843 MIS18AQ9NYP9 233 aa20.15■□□□□ 0.82
UBE3B-211ENST00000539843 NFKBIEO00221 500 aa20.14■□□□□ 0.81
UBE3B-211ENST00000539843 SRGNP10124 158 aa20.14■□□□□ 0.81
UBE3B-211ENST00000539843 VEGFAP15692 232 aaPredicted RBP20.14■□□□□ 0.81
UBE3B-211ENST00000539843 LMOD3Q0VAK6 560 aa20.14■□□□□ 0.81
UBE3B-211ENST00000539843 ERFEQ4G0M1 354 aa20.14■□□□□ 0.81
UBE3B-211ENST00000539843 PLEKHF1Q96S99 279 aa20.14■□□□□ 0.81
UBE3B-211ENST00000539843 LTBP3Q9NS15 1303 aa20.13■□□□□ 0.81
UBE3B-211ENST00000539843 NBPF26B4DH59 902 aa20.13■□□□□ 0.81
UBE3B-211ENST00000539843 NPR1P16066 1061 aa20.13■□□□□ 0.81
UBE3B-211ENST00000539843 PRPF40BQ6NWY9 871 aaKnown RBP20.13■□□□□ 0.81
UBE3B-211ENST00000539843 NBPF10Q6P3W6 841 aaKnown RBP20.13■□□□□ 0.81
UBE3B-211ENST00000539843 NBPF15Q8N660 670 aa20.13■□□□□ 0.81
UBE3B-211ENST00000539843 NYXQ9GZU5 481 aa20.13■□□□□ 0.81
UBE3B-211ENST00000539843 SBF1O95248 1867 aa20.11■□□□□ 0.81
UBE3B-211ENST00000539843 FAM177BA6PVY3 158 aa20.11■□□□□ 0.81
UBE3B-211ENST00000539843 CCDC93Q567U6 631 aa20.11■□□□□ 0.81
UBE3B-211ENST00000539843 NGEFQ8N5V2 710 aa20.11■□□□□ 0.81
UBE3B-211ENST00000539843 TSPYL4Q9UJ04 414 aa20.11■□□□□ 0.81
UBE3B-211ENST00000539843 RRP7AQ9Y3A4 280 aaKnown RBP20.11■□□□□ 0.81
UBE3B-211ENST00000539843 ANKRD31Q8N7Z5 1873 aa20.11■□□□□ 0.81
UBE3B-211ENST00000539843 LAMB4A4D0S4 1761 aa20.11■□□□□ 0.81
UBE3B-211ENST00000539843 ERBB4Q15303 1308 aa20.1■□□□□ 0.81
UBE3B-211ENST00000539843 ERVV-1B6SEH8 477 aa20.1■□□□□ 0.81
UBE3B-211ENST00000539843 EIF4A1P60842 406 aaKnown RBP20.1■□□□□ 0.81
UBE3B-211ENST00000539843 ALDH1B1P30837 517 aa20.09■□□□□ 0.81
UBE3B-211ENST00000539843 RIPK4P57078 832 aa20.09■□□□□ 0.81
UBE3B-211ENST00000539843 COL11A2P13942 1736 aaPredicted RBP20.09■□□□□ 0.81
UBE3B-211ENST00000539843 MAP3K15Q6ZN16 1313 aa20.08■□□□□ 0.81
UBE3B-211ENST00000539843 MYBBP1AQ9BQG0 1328 aaKnown RBP20.08■□□□□ 0.81
UBE3B-211ENST00000539843 TIAM2Q8IVF5 1701 aa20.08■□□□□ 0.81
UBE3B-211ENST00000539843 MYL6BP14649 208 aa20.08■□□□□ 0.81
UBE3B-211ENST00000539843 THUMPD2Q9BTF0 503 aaKnown RBP20.08■□□□□ 0.81
UBE3B-211ENST00000539843 BABAM1Q9NWV8 329 aa20.08■□□□□ 0.81
UBE3B-211ENST00000539843 WDR43Q15061 677 aaKnown RBP eCLIP20.07■□□□□ 0.8
UBE3B-211ENST00000539843 KDM3BQ7LBC6 1761 aa20.06■□□□□ 0.8
UBE3B-211ENST00000539843 PRELPP51888 382 aa20.06■□□□□ 0.8
UBE3B-211ENST00000539843 HLFQ16534 295 aa20.06■□□□□ 0.8
UBE3B-211ENST00000539843 RTKN2Q8IZC4 609 aa20.06■□□□□ 0.8
UBE3B-211ENST00000539843 KLRG2A4D1S0 409 aaPredicted RBP20.05■□□□□ 0.8
UBE3B-211ENST00000539843 DDX10Q13206 875 aaKnown RBP20.05■□□□□ 0.8
UBE3B-211ENST00000539843 DLG5Q8TDM6 1919 aa20.05■□□□□ 0.8
UBE3B-211ENST00000539843 RPGRQ92834 1020 aaKnown RBP20.04■□□□□ 0.8
UBE3B-211ENST00000539843 TMX4Q9H1E5 349 aaPredicted RBP20.04■□□□□ 0.8
UBE3B-211ENST00000539843 ZBTB3Q9H5J0 574 aa20.04■□□□□ 0.8
UBE3B-211ENST00000539843 IQCA1LA6NCM1 817 aa20.03■□□□□ 0.8
UBE3B-211ENST00000539843 FKBP4Q02790 459 aaKnown RBP eCLIP20.03■□□□□ 0.8
UBE3B-211ENST00000539843 PPP1R42Q7Z4L9 355 aa20.03■□□□□ 0.8
UBE3B-211ENST00000539843 IBTKQ9P2D0 1353 aaPredicted RBP20.03■□□□□ 0.8
UBE3B-211ENST00000539843 WDR90Q96KV7 1748 aa20.02■□□□□ 0.8
UBE3B-211ENST00000539843 EIF2S2P20042 333 aaKnown RBP20.02■□□□□ 0.8
UBE3B-211ENST00000539843 GPTP24298 496 aa20.02■□□□□ 0.8
UBE3B-211ENST00000539843 TMPOP42166 694 aaKnown RBP20.02■□□□□ 0.8
UBE3B-211ENST00000539843 PARP10Q53GL7 1025 aa20.02■□□□□ 0.8
UBE3B-211ENST00000539843 CC2D2BQ6DHV5 1058 aa20.02■□□□□ 0.8
UBE3B-211ENST00000539843 KLRG1Q96E93 195 aa20.02■□□□□ 0.8
UBE3B-211ENST00000539843 ARFGEF2Q9Y6D5 1785 aa20.02■□□□□ 0.8
UBE3B-211ENST00000539843 FER1L6Q2WGJ9 1857 aa20.02■□□□□ 0.8
UBE3B-211ENST00000539843 TTLL7Q6ZT98 887 aa20.01■□□□□ 0.79
UBE3B-211ENST00000539843 NUTM1Q86Y26 1132 aa20.01■□□□□ 0.79
UBE3B-211ENST00000539843 SLX4Q8IY92 1834 aa20■□□□□ 0.79
UBE3B-211ENST00000539843 GRIPAP1Q4V328 841 aa20■□□□□ 0.79
UBE3B-211ENST00000539843 GIGYF2Q6Y7W6 1299 aaKnown RBP20■□□□□ 0.79
UBE3B-211ENST00000539843 DNAJC5GQ8N7S2 189 aa20■□□□□ 0.79
UBE3B-211ENST00000539843 C7orf43Q8WVR3 580 aa20■□□□□ 0.79
UBE3B-211ENST00000539843 CEP350Q5VT06 3117 aa20■□□□□ 0.79
UBE3B-211ENST00000539843 CACNA1SQ13698 1873 aa19.99■□□□□ 0.79
UBE3B-211ENST00000539843 CCDC88AQ3V6T2 1871 aa19.99■□□□□ 0.79
UBE3B-211ENST00000539843 NEUROD2Q15784 382 aa19.99■□□□□ 0.79
UBE3B-211ENST00000539843 HSP90AB3PQ58FF7 597 aa19.99■□□□□ 0.79
UBE3B-211ENST00000539843 JDP2Q8WYK2 163 aa19.99■□□□□ 0.79
UBE3B-211ENST00000539843 RUNDC1Q96C34 613 aa19.99■□□□□ 0.79
UBE3B-211ENST00000539843 RBM17Q96I25 401 aaKnown RBP19.99■□□□□ 0.79
UBE3B-211ENST00000539843 DDNO94850 711 aaPredicted RBP19.98■□□□□ 0.79
UBE3B-211ENST00000539843 CRY2Q49AN0 593 aa19.98■□□□□ 0.79
UBE3B-211ENST00000539843 IFFO2Q5TF58 517 aa19.98■□□□□ 0.79
UBE3B-211ENST00000539843 ZNF277Q9NRM2 450 aaPredicted RBP19.98■□□□□ 0.79
UBE3B-211ENST00000539843 RIC1Q4ADV7 1423 aa19.98■□□□□ 0.79
UBE3B-211ENST00000539843 ABCC12Q96J65 1359 aa19.97■□□□□ 0.79
UBE3B-211ENST00000539843 IARSP41252 1262 aaKnown RBP19.97■□□□□ 0.79
UBE3B-211ENST00000539843 CCDC146Q8IYE0 955 aa19.97■□□□□ 0.79
UBE3B-211ENST00000539843 NLRP3Q96P20 1036 aa19.97■□□□□ 0.79
UBE3B-211ENST00000539843 LAS1LQ9Y4W2 734 aaKnown RBP19.97■□□□□ 0.79
UBE3B-211ENST00000539843 DICER1Q9UPY3 1922 aaKnown RBP19.97■□□□□ 0.79
UBE3B-211ENST00000539843 RNF123Q5XPI4 1314 aa19.97■□□□□ 0.79
UBE3B-211ENST00000539843 HTRA3P83110 453 aa19.96■□□□□ 0.79
UBE3B-211ENST00000539843 SUSD4Q5VX71 490 aa19.96■□□□□ 0.79
UBE3B-211ENST00000539843 CHADLQ6NUI6 762 aa19.96■□□□□ 0.79
UBE3B-211ENST00000539843 ZNF34Q8IZ26 560 aa19.96■□□□□ 0.79
UBE3B-211ENST00000539843 PSMD1Q99460 953 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms