RNA–Protein interactions for RNA: ENST00000539455.5

CELF1-220, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 5

Gene CELF1, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-220ENST00000539455 TRPA1O75762 1119 aa7.35□□□□□ -1.23
CELF1-220ENST00000539455 TM4SF1P30408 202 aa7.35□□□□□ -1.23
CELF1-220ENST00000539455 PKN2Q16513 984 aaKnown RBP7.35□□□□□ -1.23
CELF1-220ENST00000539455 C2CD5Q86YS7 1000 aa7.35□□□□□ -1.23
CELF1-220ENST00000539455 IP6K1Q92551 441 aa7.35□□□□□ -1.23
CELF1-220ENST00000539455 FAM212AQ96EL1 285 aa7.35□□□□□ -1.23
CELF1-220ENST00000539455 RNF186Q9NXI6 227 aa7.35□□□□□ -1.23
CELF1-220ENST00000539455 SCN4AP35499 1836 aa7.35□□□□□ -1.23
CELF1-220ENST00000539455 SMG6Q86US8 1419 aaKnown RBP7.35□□□□□ -1.23
CELF1-220ENST00000539455 CGNL1Q0VF96 1302 aa7.34□□□□□ -1.23
CELF1-220ENST00000539455 USP42Q9H9J4 1324 aaKnown RBP7.34□□□□□ -1.23
CELF1-220ENST00000539455 SPTBN5Q9NRC6 3674 aaKnown RBP7.34□□□□□ -1.23
CELF1-220ENST00000539455 CEP290O15078 2479 aa7.34□□□□□ -1.23
CELF1-220ENST00000539455 CYP27B1O15528 508 aa7.34□□□□□ -1.23
CELF1-220ENST00000539455 ECM2O94769 699 aaPredicted RBP7.34□□□□□ -1.23
CELF1-220ENST00000539455 RC3H1Q5TC82 1133 aaKnown RBP7.34□□□□□ -1.23
CELF1-220ENST00000539455 SYNE4Q8N205 404 aa7.34□□□□□ -1.23
CELF1-220ENST00000539455 TMC1Q8TDI8 760 aa7.34□□□□□ -1.23
CELF1-220ENST00000539455 PUS7Q96PZ0 661 aaKnown RBP7.34□□□□□ -1.23
CELF1-220ENST00000539455 PANK3Q9H999 370 aa7.34□□□□□ -1.23
CELF1-220ENST00000539455 CD163L1Q9NR16 1453 aa7.34□□□□□ -1.23
CELF1-220ENST00000539455 KDRP35968 1356 aa7.33□□□□□ -1.24
CELF1-220ENST00000539455 RANBP2P49792 3224 aaKnown RBP7.33□□□□□ -1.24
CELF1-220ENST00000539455 BRCA2P51587 3418 aa7.33□□□□□ -1.24
CELF1-220ENST00000539455 CNTNAP4Q9C0A0 1308 aa7.33□□□□□ -1.24
CELF1-220ENST00000539455 H0YIN7 160 aa7.33□□□□□ -1.24
CELF1-220ENST00000539455 CELF2O95319 508 aaKnown RBP7.33□□□□□ -1.24
CELF1-220ENST00000539455 BICDL1Q6ZP65 573 aa7.33□□□□□ -1.24
CELF1-220ENST00000539455 CCDC24Q8N4L8 307 aa7.33□□□□□ -1.24
CELF1-220ENST00000539455 SLC4A9Q96Q91 983 aa7.33□□□□□ -1.24
CELF1-220ENST00000539455 SLC12A5Q9H2X9 1139 aa7.33□□□□□ -1.24
CELF1-220ENST00000539455 RBM27Q9P2N5 1060 aaKnown RBP7.33□□□□□ -1.24
CELF1-220ENST00000539455 VCANP13611 3396 aa7.33□□□□□ -1.24
CELF1-220ENST00000539455 CACNA1AO00555 2505 aa7.32□□□□□ -1.24
CELF1-220ENST00000539455 H0YGN5 161 aa7.32□□□□□ -1.24
CELF1-220ENST00000539455 PLA2G5P39877 138 aa7.32□□□□□ -1.24
CELF1-220ENST00000539455 DCAF8Q5TAQ9 597 aa7.32□□□□□ -1.24
CELF1-220ENST00000539455 NME9Q86XW9 330 aa7.32□□□□□ -1.24
CELF1-220ENST00000539455 RASEFQ8IZ41 740 aa7.32□□□□□ -1.24
CELF1-220ENST00000539455 USHBP1Q8N6Y0 703 aa7.32□□□□□ -1.24
CELF1-220ENST00000539455 RAPGEF4Q8WZA2 1011 aa7.32□□□□□ -1.24
CELF1-220ENST00000539455 SCN11AQ9UI33 1791 aa7.32□□□□□ -1.24
CELF1-220ENST00000539455 A0A1W2PP64 1363 aa7.32□□□□□ -1.24
CELF1-220ENST00000539455 CARMIL3Q8ND23 1372 aa7.32□□□□□ -1.24
CELF1-220ENST00000539455 MAP3K19Q56UN5 1328 aa7.31□□□□□ -1.24
CELF1-220ENST00000539455 DICER1Q9UPY3 1922 aaKnown RBP7.31□□□□□ -1.24
CELF1-220ENST00000539455 FAM155AB1AL88 458 aaPredicted RBP7.31□□□□□ -1.24
CELF1-220ENST00000539455 SOX1O00570 391 aaPredicted RBP7.31□□□□□ -1.24
CELF1-220ENST00000539455 PER1O15534 1290 aaPredicted RBP7.31□□□□□ -1.24
CELF1-220ENST00000539455 TATP17735 454 aaPredicted RBP7.31□□□□□ -1.24
CELF1-220ENST00000539455 KIF23Q02241 960 aaPredicted RBP7.31□□□□□ -1.24
CELF1-220ENST00000539455 CNGB1Q14028 1251 aaPredicted RBP7.31□□□□□ -1.24
CELF1-220ENST00000539455 FBXO46Q6PJ61 603 aaPredicted RBP7.31□□□□□ -1.24
CELF1-220ENST00000539455 ZNF622Q969S3 477 aaKnown RBP eCLIP7.31□□□□□ -1.24
CELF1-220ENST00000539455 LRCH3Q96II8 777 aa7.31□□□□□ -1.24
CELF1-220ENST00000539455 CARD14Q9BXL6 1004 aa7.31□□□□□ -1.24
CELF1-220ENST00000539455 ATG3Q9NT62 314 aa7.31□□□□□ -1.24
CELF1-220ENST00000539455 MON2Q7Z3U7 1717 aa7.3□□□□□ -1.24
CELF1-220ENST00000539455 ANP32CO43423 234 aa7.3□□□□□ -1.24
CELF1-220ENST00000539455 NBPF6Q5VWK0 638 aa7.3□□□□□ -1.24
CELF1-220ENST00000539455 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.3□□□□□ -1.24
CELF1-220ENST00000539455 NBPF4Q96M43 638 aa7.3□□□□□ -1.24
CELF1-220ENST00000539455 TMOD3Q9NYL9 352 aa7.3□□□□□ -1.24
CELF1-220ENST00000539455 HDAC9Q9UKV0 1011 aa7.3□□□□□ -1.24
CELF1-220ENST00000539455 KTN1Q86UP2 1357 aaKnown RBP7.3□□□□□ -1.24
CELF1-220ENST00000539455 LTN1O94822 1766 aa7.29□□□□□ -1.24
CELF1-220ENST00000539455 DLEC1Q9Y238 1755 aa7.29□□□□□ -1.24
CELF1-220ENST00000539455 EN2P19622 333 aaPredicted RBP7.29□□□□□ -1.24
CELF1-220ENST00000539455 EPS15P42566 896 aa7.29□□□□□ -1.24
CELF1-220ENST00000539455 NFIXQ14938 502 aa7.29□□□□□ -1.24
CELF1-220ENST00000539455 GPC2Q8N158 579 aa7.29□□□□□ -1.24
CELF1-220ENST00000539455 FAM122AQ96E09 287 aa7.29□□□□□ -1.24
CELF1-220ENST00000539455 ZNF408Q9H9D4 720 aa7.29□□□□□ -1.24
CELF1-220ENST00000539455 KNSTRNQ9Y448 316 aa7.29□□□□□ -1.24
CELF1-220ENST00000539455 ERBB4Q15303 1308 aa7.28□□□□□ -1.24
CELF1-220ENST00000539455 RGPD2P0DJD1 1756 aa7.28□□□□□ -1.24
CELF1-220ENST00000539455 FZD9O00144 591 aa7.28□□□□□ -1.24
CELF1-220ENST00000539455 SERPINB2P05120 415 aa7.28□□□□□ -1.24
CELF1-220ENST00000539455 HOXC9P31274 260 aa7.28□□□□□ -1.24
CELF1-220ENST00000539455 HUNKP57058 714 aa7.28□□□□□ -1.24
CELF1-220ENST00000539455 NKX1-1Q15270 411 aaPredicted RBP7.28□□□□□ -1.24
CELF1-220ENST00000539455 CC2D1BQ5T0F9 858 aaKnown RBP7.28□□□□□ -1.24
CELF1-220ENST00000539455 DLK2Q6UY11 383 aa7.28□□□□□ -1.24
CELF1-220ENST00000539455 HDGFL2Q7Z4V5 671 aaPredicted RBP7.28□□□□□ -1.24
CELF1-220ENST00000539455 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.28□□□□□ -1.24
CELF1-220ENST00000539455 ZNF296Q8WUU4 475 aaPredicted RBP7.28□□□□□ -1.24
CELF1-220ENST00000539455 GLIS2Q9BZE0 524 aaPredicted RBP7.28□□□□□ -1.24
CELF1-220ENST00000539455 PRKRIP1Q9H875 184 aaPredicted RBP7.28□□□□□ -1.24
CELF1-220ENST00000539455 ZNF277Q9NRM2 450 aaPredicted RBP7.28□□□□□ -1.24
CELF1-220ENST00000539455 TERF2IPQ9NYB0 399 aa7.28□□□□□ -1.24
CELF1-220ENST00000539455 ITGB4P16144 1822 aa7.28□□□□□ -1.24
CELF1-220ENST00000539455 KIF20BQ96Q89 1820 aa7.28□□□□□ -1.24
CELF1-220ENST00000539455 FER1L6Q2WGJ9 1857 aa7.28□□□□□ -1.24
CELF1-220ENST00000539455 TRPM7Q96QT4 1865 aa7.28□□□□□ -1.24
CELF1-220ENST00000539455 LMOD1P29536 600 aaPredicted RBP7.27□□□□□ -1.25
CELF1-220ENST00000539455 CRKLP46109 303 aaKnown RBP7.27□□□□□ -1.25
CELF1-220ENST00000539455 SCNN1DP51172 638 aa7.27□□□□□ -1.25
CELF1-220ENST00000539455 USPL1Q5W0Q7 1092 aa7.27□□□□□ -1.25
CELF1-220ENST00000539455 USP50Q70EL3 339 aaPredicted RBP7.27□□□□□ -1.25
CELF1-220ENST00000539455 SNX27Q96L92 541 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms