RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 UTYO14607 1347 aa21.41■■□□□ 1.02
SNX17-210ENST00000537606 EPHA10Q5JZY3 1008 aa21.41■■□□□ 1.02
SNX17-210ENST00000537606 GSE1Q14687 1217 aa21.4■■□□□ 1.02
SNX17-210ENST00000537606 KLHDC4Q8TBB5 520 aa21.4■■□□□ 1.02
SNX17-210ENST00000537606 TTLL7Q6ZT98 887 aa21.4■■□□□ 1.02
SNX17-210ENST00000537606 ERC2O15083 957 aa21.39■■□□□ 1.02
SNX17-210ENST00000537606 HSP90AB4PQ58FF6 505 aa21.39■■□□□ 1.02
SNX17-210ENST00000537606 SIL1Q9H173 461 aa21.39■■□□□ 1.02
SNX17-210ENST00000537606 TMOD3Q9NYL9 352 aa21.39■■□□□ 1.02
SNX17-210ENST00000537606 HDAC5Q9UQL6 1122 aa21.39■■□□□ 1.02
SNX17-210ENST00000537606 GLI3P10071 1580 aa21.39■■□□□ 1.02
SNX17-210ENST00000537606 SHANK3Q9BYB0 1731 aa21.39■■□□□ 1.01
SNX17-210ENST00000537606 ADAMTS2O95450 1211 aa21.39■■□□□ 1.01
SNX17-210ENST00000537606 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.39■■□□□ 1.01
SNX17-210ENST00000537606 SNX21Q969T3 373 aa21.38■■□□□ 1.01
SNX17-210ENST00000537606 PI4K2BQ8TCG2 481 aa21.38■■□□□ 1.01
SNX17-210ENST00000537606 FOXD4L1Q9NU39 408 aa21.38■■□□□ 1.01
SNX17-210ENST00000537606 ASAP1Q9ULH1 1129 aa21.38■■□□□ 1.01
SNX17-210ENST00000537606 KAT6BQ8WYB5 2073 aa21.38■■□□□ 1.01
SNX17-210ENST00000537606 UBE3BQ7Z3V4 1068 aa21.37■■□□□ 1.01
SNX17-210ENST00000537606 PLBD2Q8NHP8 589 aa21.37■■□□□ 1.01
SNX17-210ENST00000537606 CHMLP26374 656 aa21.37■■□□□ 1.01
SNX17-210ENST00000537606 PIGBQ92521 554 aa21.37■■□□□ 1.01
SNX17-210ENST00000537606 ZNF330Q9Y3S2 320 aaPredicted RBP21.37■■□□□ 1.01
SNX17-210ENST00000537606 REC8O95072 547 aa21.36■■□□□ 1.01
SNX17-210ENST00000537606 CLASRPQ8N2M8 674 aaKnown RBP21.36■■□□□ 1.01
SNX17-210ENST00000537606 A0A087WZG4 1122 aa21.36■■□□□ 1.01
SNX17-210ENST00000537606 ESYT1Q9BSJ8 1104 aa21.36■■□□□ 1.01
SNX17-210ENST00000537606 ZBTB3Q9H5J0 574 aa21.36■■□□□ 1.01
SNX17-210ENST00000537606 KCPQ6ZWJ8 1503 aa21.35■■□□□ 1.01
SNX17-210ENST00000537606 CHMP5Q9NZZ3 219 aa21.35■■□□□ 1.01
SNX17-210ENST00000537606 EIF5BO60841 1220 aaKnown RBP21.35■■□□□ 1.01
SNX17-210ENST00000537606 SASH1O94885 1247 aa21.35■■□□□ 1.01
SNX17-210ENST00000537606 G3BP1Q13283 466 aaKnown RBP eCLIP21.34■■□□□ 1.01
SNX17-210ENST00000537606 PIP4K2BP78356 416 aa21.34■■□□□ 1.01
SNX17-210ENST00000537606 IL25Q9H293 177 aa21.34■■□□□ 1.01
SNX17-210ENST00000537606 AOX1Q06278 1338 aa21.34■■□□□ 1.01
SNX17-210ENST00000537606 AACSQ86V21 672 aa21.33■■□□□ 1.01
SNX17-210ENST00000537606 TUBGCP6Q96RT7 1819 aa21.33■■□□□ 1
SNX17-210ENST00000537606 SYTL4Q96C24 671 aaPredicted RBP21.33■■□□□ 1
SNX17-210ENST00000537606 TOGARAM1Q9Y4F4 1720 aa21.32■■□□□ 1
SNX17-210ENST00000537606 NUTM2BA6NNL0 878 aaPredicted RBP21.32■■□□□ 1
SNX17-210ENST00000537606 NUTM2EB1AL46 878 aaPredicted RBP21.32■■□□□ 1
SNX17-210ENST00000537606 IFIT2P09913 472 aaKnown RBP21.32■■□□□ 1
SNX17-210ENST00000537606 NUTM2AQ8IVF1 878 aaPredicted RBP21.32■■□□□ 1
SNX17-210ENST00000537606 CCDC8Q9H0W5 538 aaPredicted RBP21.32■■□□□ 1
SNX17-210ENST00000537606 ANO2Q9NQ90 1003 aa21.32■■□□□ 1
SNX17-210ENST00000537606 ERC1Q8IUD2 1116 aa21.31■■□□□ 1
SNX17-210ENST00000537606 DNAJC10Q8IXB1 793 aa21.31■■□□□ 1
SNX17-210ENST00000537606 ATG3Q9NT62 314 aa21.31■■□□□ 1
SNX17-210ENST00000537606 LAMB4A4D0S4 1761 aa21.31■■□□□ 1
SNX17-210ENST00000537606 ERBB4Q15303 1308 aa21.31■■□□□ 1
SNX17-210ENST00000537606 EAF2Q96CJ1 260 aaPredicted RBP21.31■■□□□ 1
SNX17-210ENST00000537606 UBR2Q8IWV8 1755 aa21.31■■□□□ 1
SNX17-210ENST00000537606 K7ELQ4 463 aaPredicted RBP21.3■■□□□ 1
SNX17-210ENST00000537606 EXOC5O00471 708 aa21.3■■□□□ 1
SNX17-210ENST00000537606 ARXQ96QS3 562 aa21.3■■□□□ 1
SNX17-210ENST00000537606 ARFGEF2Q9Y6D5 1785 aa21.3■■□□□ 1
SNX17-210ENST00000537606 HSP90AA1P07900 732 aaKnown RBP21.3■■□□□ 1
SNX17-210ENST00000537606 DDIT3P35638 169 aa21.3■■□□□ 1
SNX17-210ENST00000537606 RABEP1Q15276 862 aa21.3■■□□□ 1
SNX17-210ENST00000537606 TNS2Q63HR2 1409 aa21.3■■□□□ 1
SNX17-210ENST00000537606 TLR7Q9NYK1 1049 aaKnown RBP21.29■■□□□ 1
SNX17-210ENST00000537606 LTBP4Q8N2S1 1624 aa21.29■■□□□ 1
SNX17-210ENST00000537606 AFDNP55196 1824 aaKnown RBP21.29■■□□□ 1
SNX17-210ENST00000537606 COL14A1Q05707 1796 aaKnown RBP21.29■■□□□ 1
SNX17-210ENST00000537606 ECHDC1Q9NTX5 307 aa21.28■■□□□ 1
SNX17-210ENST00000537606 COL16A1Q07092 1604 aaPredicted RBP21.28■■□□□ 1
SNX17-210ENST00000537606 AHDC1Q5TGY3 1603 aaPredicted RBP21.28■■□□□ 1
SNX17-210ENST00000537606 MCM4P33991 863 aa21.28■■□□□ 1
SNX17-210ENST00000537606 CASP7P55210 303 aa21.28■■□□□ 1
SNX17-210ENST00000537606 CNTROBQ8N137 903 aa21.28■■□□□ 1
SNX17-210ENST00000537606 CHMP3Q9Y3E7 222 aa21.28■■□□□ 1
SNX17-210ENST00000537606 DISP2A7MBM2 1401 aa21.28■■□□□ 1
SNX17-210ENST00000537606 TTC41PQ6P2S7 1318 aa21.27■■□□□ 1
SNX17-210ENST00000537606 PAPPAQ13219 1627 aa21.27■■□□□ 1
SNX17-210ENST00000537606 A0A0G2JS52 829 aa21.27■■□□□ 1
SNX17-210ENST00000537606 GLRX3O76003 335 aaKnown RBP21.27■■□□□ 1
SNX17-210ENST00000537606 LMBR1LQ6UX01 489 aa21.27■■□□□ 1
SNX17-210ENST00000537606 PALD1Q9ULE6 856 aa21.27■■□□□ 1
SNX17-210ENST00000537606 USP42Q9H9J4 1324 aaKnown RBP21.26■□□□□ 0.99
SNX17-210ENST00000537606 RFX5P48382 616 aaPredicted RBP21.26■□□□□ 0.99
SNX17-210ENST00000537606 PTPN12Q05209 780 aaKnown RBP21.26■□□□□ 0.99
SNX17-210ENST00000537606 CWC25Q9NXE8 425 aaPredicted RBP21.26■□□□□ 0.99
SNX17-210ENST00000537606 RABL6Q3YEC7 729 aaPredicted RBP21.25■□□□□ 0.99
SNX17-210ENST00000537606 CWC27Q6UX04 472 aaKnown RBP21.25■□□□□ 0.99
SNX17-210ENST00000537606 H7C1W4 665 aa21.25■□□□□ 0.99
SNX17-210ENST00000537606 PRIM1P49642 420 aaKnown RBP21.25■□□□□ 0.99
SNX17-210ENST00000537606 SLC4A9Q96Q91 983 aa21.25■□□□□ 0.99
SNX17-210ENST00000537606 GPATCH3Q96I76 525 aa21.24■□□□□ 0.99
SNX17-210ENST00000537606 FOXO4P98177 505 aa21.24■□□□□ 0.99
SNX17-210ENST00000537606 COPRSQ9NQ92 184 aa21.24■□□□□ 0.99
SNX17-210ENST00000537606 TFCP2Q12800 502 aa21.23■□□□□ 0.99
SNX17-210ENST00000537606 BOLA2Q9H3K6 86 aa21.23■□□□□ 0.99
SNX17-210ENST00000537606 CCDC9Q9Y3X0 531 aaKnown RBP21.23■□□□□ 0.99
SNX17-210ENST00000537606 COL22A1Q8NFW1 1626 aaPredicted RBP21.22■□□□□ 0.99
SNX17-210ENST00000537606 AK9Q5TCS8 1911 aa21.22■□□□□ 0.99
SNX17-210ENST00000537606 STARD3NLO95772 234 aa21.22■□□□□ 0.99
SNX17-210ENST00000537606 TNPO1Q92973 898 aaKnown RBP21.22■□□□□ 0.99
SNX17-210ENST00000537606 ITGB4P16144 1822 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms