RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 PRPF40BQ6NWY9 871 aaKnown RBP23.66■■□□□ 1.38
LTBR-206ENST00000536876 CNBD1Q8NA66 436 aa23.66■■□□□ 1.38
LTBR-206ENST00000536876 PHACTR3Q96KR7 559 aa23.66■■□□□ 1.38
LTBR-206ENST00000536876 TEX13AQ9BXU3 409 aaPredicted RBP23.66■■□□□ 1.38
LTBR-206ENST00000536876 TAOK3Q9H2K8 898 aa23.66■■□□□ 1.38
LTBR-206ENST00000536876 STYK1Q6J9G0 422 aa23.64■■□□□ 1.37
LTBR-206ENST00000536876 CCER1Q8TC90 406 aaPredicted RBP23.64■■□□□ 1.37
LTBR-206ENST00000536876 RSPH6AQ9H0K4 717 aa23.64■■□□□ 1.37
LTBR-206ENST00000536876 DDNO94850 711 aaPredicted RBP23.63■■□□□ 1.37
LTBR-206ENST00000536876 DPY19L2Q6NUT2 758 aa23.63■■□□□ 1.37
LTBR-206ENST00000536876 SETDB2Q96T68 719 aa23.63■■□□□ 1.37
LTBR-206ENST00000536876 DZIP3Q86Y13 1208 aaKnown RBP23.62■■□□□ 1.37
LTBR-206ENST00000536876 C7orf43Q8WVR3 580 aa23.62■■□□□ 1.37
LTBR-206ENST00000536876 USP16Q9Y5T5 823 aa23.62■■□□□ 1.37
LTBR-206ENST00000536876 DLG5Q8TDM6 1919 aa23.62■■□□□ 1.37
LTBR-206ENST00000536876 KDM3BQ7LBC6 1761 aa23.62■■□□□ 1.37
LTBR-206ENST00000536876 SNED1Q8TER0 1413 aa23.61■■□□□ 1.37
LTBR-206ENST00000536876 PRKAR2BP31323 418 aa23.61■■□□□ 1.37
LTBR-206ENST00000536876 CHADLQ6NUI6 762 aa23.61■■□□□ 1.37
LTBR-206ENST00000536876 CNKSR1Q969H4 720 aa23.61■■□□□ 1.37
LTBR-206ENST00000536876 BTBD11A6QL63 1104 aa23.6■■□□□ 1.37
LTBR-206ENST00000536876 ST5P78524 1137 aa23.6■■□□□ 1.37
LTBR-206ENST00000536876 CNGB1Q14028 1251 aaPredicted RBP23.6■■□□□ 1.37
LTBR-206ENST00000536876 MASTLQ96GX5 879 aa23.6■■□□□ 1.37
LTBR-206ENST00000536876 PASKQ96RG2 1323 aa23.59■■□□□ 1.37
LTBR-206ENST00000536876 CREBZFQ9NS37 354 aa23.59■■□□□ 1.37
LTBR-206ENST00000536876 NUP98P52948 1817 aa23.59■■□□□ 1.37
LTBR-206ENST00000536876 L3MBTL3Q96JM7 780 aaPredicted RBP23.58■■□□□ 1.37
LTBR-206ENST00000536876 MKRN1Q9UHC7 482 aaKnown RBP23.58■■□□□ 1.37
LTBR-206ENST00000536876 ZNF541Q9H0D2 1346 aa23.58■■□□□ 1.36
LTBR-206ENST00000536876 COL4A5P29400 1685 aa23.57■■□□□ 1.36
LTBR-206ENST00000536876 LTBP1Q14766 1721 aa23.57■■□□□ 1.36
LTBR-206ENST00000536876 NBPF26B4DH59 902 aa23.57■■□□□ 1.36
LTBR-206ENST00000536876 NBPF10Q6P3W6 841 aaKnown RBP23.57■■□□□ 1.36
LTBR-206ENST00000536876 OLFM4Q6UX06 510 aa23.57■■□□□ 1.36
LTBR-206ENST00000536876 NBPF15Q8N660 670 aa23.57■■□□□ 1.36
LTBR-206ENST00000536876 CNTNAP1P78357 1384 aa23.56■■□□□ 1.36
LTBR-206ENST00000536876 KLRG2A4D1S0 409 aaPredicted RBP23.56■■□□□ 1.36
LTBR-206ENST00000536876 SOGA3Q5TF21 947 aa23.55■■□□□ 1.36
LTBR-206ENST00000536876 NBPF5PQ86XG9 351 aaPredicted RBP23.55■■□□□ 1.36
LTBR-206ENST00000536876 CLEC4GQ6UXB4 293 aa23.54■■□□□ 1.36
LTBR-206ENST00000536876 MCM10Q7L590 875 aa23.54■■□□□ 1.36
LTBR-206ENST00000536876 TAF1DQ9H5J8 278 aaPredicted RBP23.54■■□□□ 1.36
LTBR-206ENST00000536876 NPHP1O15259 732 aa23.53■■□□□ 1.36
LTBR-206ENST00000536876 CCDC93Q567U6 631 aa23.53■■□□□ 1.36
LTBR-206ENST00000536876 ABCC12Q96J65 1359 aa23.52■■□□□ 1.36
LTBR-206ENST00000536876 NPR1P16066 1061 aa23.52■■□□□ 1.36
LTBR-206ENST00000536876 LDHDQ86WU2 507 aa23.52■■□□□ 1.36
LTBR-206ENST00000536876 ZNF277Q9NRM2 450 aaPredicted RBP23.52■■□□□ 1.36
LTBR-206ENST00000536876 SNRPA1P09661 255 aaKnown RBP23.51■■□□□ 1.35
LTBR-206ENST00000536876 FKBP4Q02790 459 aaKnown RBP eCLIP23.51■■□□□ 1.35
LTBR-206ENST00000536876 DCTN1Q14203 1278 aa23.51■■□□□ 1.35
LTBR-206ENST00000536876 THSD7BQ9C0I4 1608 aa23.51■■□□□ 1.35
LTBR-206ENST00000536876 FOXN1O15353 648 aa23.5■■□□□ 1.35
LTBR-206ENST00000536876 ITGBL1O95965 494 aaPredicted RBP23.5■■□□□ 1.35
LTBR-206ENST00000536876 NPM2Q86SE8 214 aaKnown RBP23.5■■□□□ 1.35
LTBR-206ENST00000536876 IQCA1LA6NCM1 817 aa23.49■■□□□ 1.35
LTBR-206ENST00000536876 RGL2O15211 777 aa23.49■■□□□ 1.35
LTBR-206ENST00000536876 HLFQ16534 295 aa23.49■■□□□ 1.35
LTBR-206ENST00000536876 NIP7Q9Y221 180 aaKnown RBP eCLIP23.49■■□□□ 1.35
LTBR-206ENST00000536876 ZNF652Q9Y2D9 606 aa23.49■■□□□ 1.35
LTBR-206ENST00000536876 SLC51AQ86UW1 340 aa23.48■■□□□ 1.35
LTBR-206ENST00000536876 FAM177BA6PVY3 158 aa23.46■■□□□ 1.35
LTBR-206ENST00000536876 RNF123Q5XPI4 1314 aa23.45■■□□□ 1.34
LTBR-206ENST00000536876 FZD9O00144 591 aa23.45■■□□□ 1.34
LTBR-206ENST00000536876 PPP2R1AP30153 589 aa23.45■■□□□ 1.34
LTBR-206ENST00000536876 VEGFBP49765 207 aa23.45■■□□□ 1.34
LTBR-206ENST00000536876 CFAP53Q96M91 514 aa23.45■■□□□ 1.34
LTBR-206ENST00000536876 RIC1Q4ADV7 1423 aa23.44■■□□□ 1.34
LTBR-206ENST00000536876 U2AF1L5P0DN76 240 aaPredicted RBP23.44■■□□□ 1.34
LTBR-206ENST00000536876 U2AF1Q01081 240 aaKnown RBP eCLIP23.44■■□□□ 1.34
LTBR-206ENST00000536876 CRY2Q49AN0 593 aa23.44■■□□□ 1.34
LTBR-206ENST00000536876 TPTE2Q6XPS3 522 aa23.44■■□□□ 1.34
LTBR-206ENST00000536876 TRPM7Q96QT4 1865 aa23.43■■□□□ 1.34
LTBR-206ENST00000536876 LAMB2P55268 1798 aa23.43■■□□□ 1.34
LTBR-206ENST00000536876 EPHX2P34913 555 aa23.43■■□□□ 1.34
LTBR-206ENST00000536876 IARSP41252 1262 aaKnown RBP23.43■■□□□ 1.34
LTBR-206ENST00000536876 EAPPQ56P03 285 aaPredicted RBP23.43■■□□□ 1.34
LTBR-206ENST00000536876 HACL1Q9UJ83 578 aa23.43■■□□□ 1.34
LTBR-206ENST00000536876 TMEM88BA6NKF7 163 aa23.42■■□□□ 1.34
LTBR-206ENST00000536876 RTKN2Q8IZC4 609 aa23.42■■□□□ 1.34
LTBR-206ENST00000536876 SYNE4Q8N205 404 aa23.42■■□□□ 1.34
LTBR-206ENST00000536876 RTF1Q92541 710 aaKnown RBP23.42■■□□□ 1.34
LTBR-206ENST00000536876 MIS18AQ9NYP9 233 aa23.42■■□□□ 1.34
LTBR-206ENST00000536876 ANKRD36CQ5JPF3 1778 aa23.4■■□□□ 1.34
LTBR-206ENST00000536876 UBN2Q6ZU65 1347 aa23.4■■□□□ 1.34
LTBR-206ENST00000536876 HTATSF1O43719 755 aaKnown RBP23.4■■□□□ 1.34
LTBR-206ENST00000536876 MAP1SQ66K74 1059 aaPredicted RBP23.4■■□□□ 1.34
LTBR-206ENST00000536876 NUTM1Q86Y26 1132 aa23.4■■□□□ 1.34
LTBR-206ENST00000536876 PSMD1Q99460 953 aa23.4■■□□□ 1.34
LTBR-206ENST00000536876 NUDCQ9Y266 331 aa23.4■■□□□ 1.34
LTBR-206ENST00000536876 IBTKQ9P2D0 1353 aaPredicted RBP23.4■■□□□ 1.34
LTBR-206ENST00000536876 PRDM10Q9NQV6 1147 aa23.39■■□□□ 1.33
LTBR-206ENST00000536876 RASSF10A6NK89 507 aa23.38■■□□□ 1.33
LTBR-206ENST00000536876 TAF7Q15545 349 aaPredicted RBP23.38■■□□□ 1.33
LTBR-206ENST00000536876 TTLL7Q6ZT98 887 aa23.38■■□□□ 1.33
LTBR-206ENST00000536876 WBP1LQ9NX94 342 aa23.38■■□□□ 1.33
LTBR-206ENST00000536876 ALDH1B1P30837 517 aa23.37■■□□□ 1.33
LTBR-206ENST00000536876 GPC2Q8N158 579 aa23.37■■□□□ 1.33
LTBR-206ENST00000536876 MAP3K15Q6ZN16 1313 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms