RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 ATP6V1AP38606 617 aa16.19■□□□□ 0.18
CDK5RAP3-202ENST00000536708 INTS3Q68E01 1043 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-202ENST00000536708 COPS6Q7L5N1 327 aa16.19■□□□□ 0.18
CDK5RAP3-202ENST00000536708 IL27Q8NEV9 243 aa16.19■□□□□ 0.18
CDK5RAP3-202ENST00000536708 C1orf115Q9H7X2 142 aa16.19■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ZBTB1Q9Y2K1 713 aa16.18■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ILDR1Q86SU0 546 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-202ENST00000536708 CHMP4AQ9BY43 222 aa16.18■□□□□ 0.18
CDK5RAP3-202ENST00000536708 MAP3K2Q9Y2U5 619 aa16.18■□□□□ 0.18
CDK5RAP3-202ENST00000536708 TRIM37O94972 964 aa16.17■□□□□ 0.18
CDK5RAP3-202ENST00000536708 TTLL7Q6ZT98 887 aa16.17■□□□□ 0.18
CDK5RAP3-202ENST00000536708 DNAAF4Q8WXU2 420 aa16.17■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ERBB4Q15303 1308 aa16.17■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ANKRD36CQ5JPF3 1778 aa16.17■□□□□ 0.18
CDK5RAP3-202ENST00000536708 MEIS3Q99687 375 aa16.17■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ZBTB40Q9NUA8 1239 aa16.17■□□□□ 0.18
CDK5RAP3-202ENST00000536708 NUP98P52948 1817 aa16.16■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ZBTB7BO15156 539 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-202ENST00000536708 FAM196AQ6ZSG2 479 aa16.16■□□□□ 0.18
CDK5RAP3-202ENST00000536708 SMARCC1Q92922 1105 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-202ENST00000536708 SEC24BO95487 1268 aa16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 STARD3NLO95772 234 aa16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 LINC00116Q8NCU8 138 aa16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 C4BP0C0L5 1744 aa16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 BCORQ6W2J9 1755 aa16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 CRKLP46109 303 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 SLC4A3P48751 1232 aa16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 CWF19L2Q2TBE0 894 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 KSR2Q6VAB6 950 aa16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 TEX13AQ9BXU3 409 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 BCL11BQ9C0K0 894 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ATP10DQ9P241 1426 aa16.14■□□□□ 0.17
CDK5RAP3-202ENST00000536708 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
CDK5RAP3-202ENST00000536708 CCT4P50991 539 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-202ENST00000536708 BEND3Q5T5X7 828 aa16.14■□□□□ 0.17
CDK5RAP3-202ENST00000536708 SMC5Q8IY18 1101 aa16.14■□□□□ 0.17
CDK5RAP3-202ENST00000536708 ZBTB3Q9H5J0 574 aa16.14■□□□□ 0.17
CDK5RAP3-202ENST00000536708 NFKBIBQ15653 356 aa16.13■□□□□ 0.17
CDK5RAP3-202ENST00000536708 RIC3Q7Z5B4 369 aa16.13■□□□□ 0.17
CDK5RAP3-202ENST00000536708 INTS5Q6P9B9 1019 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-202ENST00000536708 SMIM5Q71RC9 77 aa16.13■□□□□ 0.17
CDK5RAP3-202ENST00000536708 DDX58O95786 925 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-202ENST00000536708 ANKRD13DQ6ZTN6 518 aa16.12■□□□□ 0.17
CDK5RAP3-202ENST00000536708 SRCIN1Q9C0H9 1055 aa16.12■□□□□ 0.17
CDK5RAP3-202ENST00000536708 CCDC87Q9NVE4 849 aa16.12■□□□□ 0.17
CDK5RAP3-202ENST00000536708 CCNL1Q9UK58 526 aaPredicted RBP16.12■□□□□ 0.17
CDK5RAP3-202ENST00000536708 UBR3Q6ZT12 1888 aa16.12■□□□□ 0.17
CDK5RAP3-202ENST00000536708 TBC1D32Q96NH3 1257 aa16.11■□□□□ 0.17
CDK5RAP3-202ENST00000536708 SCN7AQ01118 1682 aa16.11■□□□□ 0.17
CDK5RAP3-202ENST00000536708 IGKV5-2P06315 115 aa16.11■□□□□ 0.17
CDK5RAP3-202ENST00000536708 MYD88Q99836 296 aa16.11■□□□□ 0.17
CDK5RAP3-202ENST00000536708 TUBGCP6Q96RT7 1819 aa16.11■□□□□ 0.17
CDK5RAP3-202ENST00000536708 BECN1Q14457 450 aa16.1■□□□□ 0.17
CDK5RAP3-202ENST00000536708 ARXQ96QS3 562 aa16.1■□□□□ 0.17
CDK5RAP3-202ENST00000536708 CHMP4BQ9H444 224 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-202ENST00000536708 UPF2Q9HAU5 1272 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-202ENST00000536708 LRRC4BQ9NT99 713 aa16.1■□□□□ 0.17
CDK5RAP3-202ENST00000536708 ATP5J2-PTCD1G3V325 749 aa16.09■□□□□ 0.17
CDK5RAP3-202ENST00000536708 AMIGO3Q86WK7 504 aa16.09■□□□□ 0.17
CDK5RAP3-202ENST00000536708 PLBD2Q8NHP8 589 aa16.09■□□□□ 0.17
CDK5RAP3-202ENST00000536708 USP44Q9H0E7 712 aa16.09■□□□□ 0.17
CDK5RAP3-202ENST00000536708 ANO8Q9HCE9 1232 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP3-202ENST00000536708 NBPF7P0C2Y1 421 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP3-202ENST00000536708 METTL22Q9BUU2 404 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP3-202ENST00000536708 COL15A1P39059 1388 aa16.08■□□□□ 0.17
CDK5RAP3-202ENST00000536708 RGPD3A6NKT7 1758 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-202ENST00000536708 RGPD4Q7Z3J3 1758 aa16.08■□□□□ 0.16
CDK5RAP3-202ENST00000536708 IL6STP40189 918 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 EIF5P55010 431 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 SIRT2Q8IXJ6 389 aa16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 LINS1Q8NG48 757 aa16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 TBC1D2BQ9UPU7 963 aa16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 NEURL1BA8MQ27 555 aa16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 HLFQ16534 295 aa16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 RTN4Q9NQC3 1192 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-202ENST00000536708 CNTNAP4Q9C0A0 1308 aa16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 KIF6Q6ZMV9 814 aa16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 DZIP3Q86Y13 1208 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 JARID2Q92833 1246 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 LRRFIP2Q9Y608 721 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 MAP3K15Q6ZN16 1313 aa16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 PRKCSHP14314 528 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 NEXNQ0ZGT2 675 aa16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 GSE1Q14687 1217 aa16.06■□□□□ 0.16
CDK5RAP3-202ENST00000536708 CASZ1Q86V15 1759 aa16.05■□□□□ 0.16
CDK5RAP3-202ENST00000536708 GNPATO15228 680 aa16.05■□□□□ 0.16
CDK5RAP3-202ENST00000536708 ALDH1L1O75891 902 aa16.05■□□□□ 0.16
CDK5RAP3-202ENST00000536708 UBTFL1P0CB47 393 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-202ENST00000536708 NUCB1Q02818 461 aa16.05■□□□□ 0.16
CDK5RAP3-202ENST00000536708 CEP85Q6P2H3 762 aa16.05■□□□□ 0.16
CDK5RAP3-202ENST00000536708 PROM2Q8N271 834 aa16.04■□□□□ 0.16
CDK5RAP3-202ENST00000536708 APBA3O96018 575 aa16.04■□□□□ 0.16
CDK5RAP3-202ENST00000536708 GCKRQ14397 625 aa16.04■□□□□ 0.16
CDK5RAP3-202ENST00000536708 GRM8O00222 908 aa16.03■□□□□ 0.16
CDK5RAP3-202ENST00000536708 GNAI2P04899 355 aa16.03■□□□□ 0.16
CDK5RAP3-202ENST00000536708 GNAI3P08754 354 aa16.03■□□□□ 0.16
CDK5RAP3-202ENST00000536708 GPTP24298 496 aa16.03■□□□□ 0.16
CDK5RAP3-202ENST00000536708 C9orf78Q9NZ63 289 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-202ENST00000536708 MYH3P11055 1940 aa16.03■□□□□ 0.16
CDK5RAP3-202ENST00000536708 TXNRD1Q16881 649 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms