RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 TWISTNBQ3B726 338 aaPredicted RBP23.14■■□□□ 1.29
DDX55-204ENST00000536079 COPS6Q7L5N1 327 aa23.14■■□□□ 1.29
DDX55-204ENST00000536079 XAGE3Q8WTP9 111 aa23.14■■□□□ 1.29
DDX55-204ENST00000536079 PARP3Q9Y6F1 533 aa23.14■■□□□ 1.29
DDX55-204ENST00000536079 BCORQ6W2J9 1755 aa23.14■■□□□ 1.29
DDX55-204ENST00000536079 MAP3K15Q6ZN16 1313 aa23.13■■□□□ 1.29
DDX55-204ENST00000536079 AIMP1Q12904 312 aaKnown RBP23.13■■□□□ 1.29
DDX55-204ENST00000536079 ZBTB3Q9H5J0 574 aa23.13■■□□□ 1.29
DDX55-204ENST00000536079 VAMP4O75379 141 aa23.12■■□□□ 1.29
DDX55-204ENST00000536079 SLFN5Q08AF3 891 aa23.12■■□□□ 1.29
DDX55-204ENST00000536079 DBF4Q9UBU7 674 aaPredicted RBP23.12■■□□□ 1.29
DDX55-204ENST00000536079 MYH16Q9H6N6 1097 aa23.11■■□□□ 1.29
DDX55-204ENST00000536079 PHAXQ9H814 394 aaKnown RBP23.11■■□□□ 1.29
DDX55-204ENST00000536079 SERPINB2P05120 415 aa23.1■■□□□ 1.29
DDX55-204ENST00000536079 ERVV-1B6SEH8 477 aa23.09■■□□□ 1.29
DDX55-204ENST00000536079 CLEC4GQ6UXB4 293 aa23.09■■□□□ 1.29
DDX55-204ENST00000536079 KIF6Q6ZMV9 814 aa23.09■■□□□ 1.29
DDX55-204ENST00000536079 CCDC24Q8N4L8 307 aa23.09■■□□□ 1.29
DDX55-204ENST00000536079 CD2APQ9Y5K6 639 aa23.09■■□□□ 1.29
DDX55-204ENST00000536079 C10orf71Q711Q0 1435 aa23.08■■□□□ 1.29
DDX55-204ENST00000536079 E9PSI1 815 aa23.08■■□□□ 1.29
DDX55-204ENST00000536079 HNRNPUQ00839 825 aaKnown RBP eCLIP23.08■■□□□ 1.29
DDX55-204ENST00000536079 CCDC30Q5VVM6 783 aa23.08■■□□□ 1.29
DDX55-204ENST00000536079 TRMT2AQ8IZ69 625 aaKnown RBP23.08■■□□□ 1.29
DDX55-204ENST00000536079 CARMIL3Q8ND23 1372 aa23.07■■□□□ 1.28
DDX55-204ENST00000536079 SETDB2Q96T68 719 aa23.07■■□□□ 1.28
DDX55-204ENST00000536079 HYPKQ9NX55 129 aa23.07■■□□□ 1.28
DDX55-204ENST00000536079 G2E3Q7L622 706 aa23.06■■□□□ 1.28
DDX55-204ENST00000536079 NIP7Q9Y221 180 aaKnown RBP eCLIP23.06■■□□□ 1.28
DDX55-204ENST00000536079 UBN2Q6ZU65 1347 aa23.06■■□□□ 1.28
DDX55-204ENST00000536079 RGL2O15211 777 aa23.05■■□□□ 1.28
DDX55-204ENST00000536079 GIGYF2Q6Y7W6 1299 aaKnown RBP23.05■■□□□ 1.28
DDX55-204ENST00000536079 ZNF652Q9Y2D9 606 aa23.05■■□□□ 1.28
DDX55-204ENST00000536079 AFDNP55196 1824 aaKnown RBP23.05■■□□□ 1.28
DDX55-204ENST00000536079 NRXN2Q9P2S2 1712 aa23.05■■□□□ 1.28
DDX55-204ENST00000536079 FAM177BA6PVY3 158 aa23.04■■□□□ 1.28
DDX55-204ENST00000536079 GPTP24298 496 aa23.04■■□□□ 1.28
DDX55-204ENST00000536079 PRR5LQ6MZQ0 368 aa23.04■■□□□ 1.28
DDX55-204ENST00000536079 ZNF34Q8IZ26 560 aa23.04■■□□□ 1.28
DDX55-204ENST00000536079 ATP10DQ9P241 1426 aa23.03■■□□□ 1.28
DDX55-204ENST00000536079 ZNF428Q96B54 188 aa23.03■■□□□ 1.28
DDX55-204ENST00000536079 WWC3Q9ULE0 1092 aa23.03■■□□□ 1.28
DDX55-204ENST00000536079 PXDNLA1KZ92 1463 aa23.03■■□□□ 1.28
DDX55-204ENST00000536079 KIAA1551Q9HCM1 1747 aa23.02■■□□□ 1.28
DDX55-204ENST00000536079 A0A0G2JLW4 131 aa23.02■■□□□ 1.28
DDX55-204ENST00000536079 SLC4A2P04920 1241 aa23.02■■□□□ 1.28
DDX55-204ENST00000536079 ANKRD13DQ6ZTN6 518 aa23.02■■□□□ 1.28
DDX55-204ENST00000536079 PLBD2Q8NHP8 589 aa23.02■■□□□ 1.28
DDX55-204ENST00000536079 NUP98P52948 1817 aa23.02■■□□□ 1.28
DDX55-204ENST00000536079 KIF13BQ9NQT8 1826 aa23.01■■□□□ 1.27
DDX55-204ENST00000536079 DPEP1P16444 411 aa23.01■■□□□ 1.27
DDX55-204ENST00000536079 KCNA3P22001 575 aa23.01■■□□□ 1.27
DDX55-204ENST00000536079 SUSD4Q5VX71 490 aa23.01■■□□□ 1.27
DDX55-204ENST00000536079 CHRNA5P30532 468 aa23■■□□□ 1.27
DDX55-204ENST00000536079 TCIRG1Q13488 830 aa23■■□□□ 1.27
DDX55-204ENST00000536079 NBPF5PQ86XG9 351 aaPredicted RBP23■■□□□ 1.27
DDX55-204ENST00000536079 STK31Q9BXU1 1019 aa22.99■■□□□ 1.27
DDX55-204ENST00000536079 TGFB2P61812 414 aa22.98■■□□□ 1.27
DDX55-204ENST00000536079 NUTM1Q86Y26 1132 aa22.98■■□□□ 1.27
DDX55-204ENST00000536079 CNBD1Q8NA66 436 aa22.98■■□□□ 1.27
DDX55-204ENST00000536079 N4BP2Q86UW6 1770 aaPredicted RBP22.97■■□□□ 1.27
DDX55-204ENST00000536079 ATP5J2-PTCD1G3V325 749 aa22.97■■□□□ 1.27
DDX55-204ENST00000536079 YBX3P16989 372 aaKnown RBP eCLIP22.97■■□□□ 1.27
DDX55-204ENST00000536079 ADCY9O60503 1353 aa22.97■■□□□ 1.27
DDX55-204ENST00000536079 GOLGB1Q14789 3259 aaKnown RBP22.96■■□□□ 1.27
DDX55-204ENST00000536079 NTSR2O95665 410 aa22.96■■□□□ 1.27
DDX55-204ENST00000536079 RIC3Q7Z5B4 369 aa22.96■■□□□ 1.27
DDX55-204ENST00000536079 NLRP10Q86W26 655 aa22.96■■□□□ 1.27
DDX55-204ENST00000536079 SYNE4Q8N205 404 aa22.96■■□□□ 1.27
DDX55-204ENST00000536079 ISCA1Q9BUE6 129 aa22.96■■□□□ 1.27
DDX55-204ENST00000536079 CHMP4AQ9BY43 222 aa22.96■■□□□ 1.27
DDX55-204ENST00000536079 ABCC12Q96J65 1359 aa22.96■■□□□ 1.27
DDX55-204ENST00000536079 FLIIQ13045 1269 aa22.95■■□□□ 1.26
DDX55-204ENST00000536079 ERFEQ4G0M1 354 aa22.95■■□□□ 1.26
DDX55-204ENST00000536079 ANKRD31Q8N7Z5 1873 aa22.95■■□□□ 1.26
DDX55-204ENST00000536079 PI4KAP2A4QPH2 592 aa22.94■■□□□ 1.26
DDX55-204ENST00000536079 TPTE2Q6XPS3 522 aa22.94■■□□□ 1.26
DDX55-204ENST00000536079 PELP1Q8IZL8 1130 aaKnown RBP22.94■■□□□ 1.26
DDX55-204ENST00000536079 PI4KAP1Q8N8J0 262 aa22.94■■□□□ 1.26
DDX55-204ENST00000536079 BRIP1Q9BX63 1249 aa22.94■■□□□ 1.26
DDX55-204ENST00000536079 MAP3K2Q9Y2U5 619 aa22.94■■□□□ 1.26
DDX55-204ENST00000536079 ZBED9Q6R2W3 1325 aa22.93■■□□□ 1.26
DDX55-204ENST00000536079 HSP90AB3PQ58FF7 597 aa22.93■■□□□ 1.26
DDX55-204ENST00000536079 KSR2Q6VAB6 950 aa22.93■■□□□ 1.26
DDX55-204ENST00000536079 SSH1Q8WYL5 1049 aa22.93■■□□□ 1.26
DDX55-204ENST00000536079 MYD88Q99836 296 aa22.93■■□□□ 1.26
DDX55-204ENST00000536079 ARFGEF2Q9Y6D5 1785 aa22.93■■□□□ 1.26
DDX55-204ENST00000536079 NPHP1O15259 732 aa22.92■■□□□ 1.26
DDX55-204ENST00000536079 ST5P78524 1137 aa22.92■■□□□ 1.26
DDX55-204ENST00000536079 PARP10Q53GL7 1025 aa22.92■■□□□ 1.26
DDX55-204ENST00000536079 C3orf67Q6ZVT6 689 aa22.92■■□□□ 1.26
DDX55-204ENST00000536079 C2CD5Q86YS7 1000 aa22.92■■□□□ 1.26
DDX55-204ENST00000536079 MRPL50Q8N5N7 158 aaKnown RBP22.92■■□□□ 1.26
DDX55-204ENST00000536079 BCL2L13Q9BXK5 485 aa22.92■■□□□ 1.26
DDX55-204ENST00000536079 GPR162Q16538 588 aa22.91■■□□□ 1.26
DDX55-204ENST00000536079 METTL22Q9BUU2 404 aaPredicted RBP22.91■■□□□ 1.26
DDX55-204ENST00000536079 UTP14AQ9BVJ6 771 aaKnown RBP22.91■■□□□ 1.26
DDX55-204ENST00000536079 IBTKQ9P2D0 1353 aaPredicted RBP22.9■■□□□ 1.26
DDX55-204ENST00000536079 DDX58O95786 925 aaKnown RBP22.9■■□□□ 1.26
DDX55-204ENST00000536079 IGKV5-2P06315 115 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms