RNA–Protein interactions for RNA: ENST00000535174.5

DDB1-205, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-205ENST00000535174 NEFLP07196 543 aa22.1■■□□□ 1.13
DDB1-205ENST00000535174 COL11A2P13942 1736 aaPredicted RBP22.1■■□□□ 1.13
DDB1-205ENST00000535174 WDR63Q8IWG1 891 aa22.1■■□□□ 1.13
DDB1-205ENST00000535174 A1BGP04217 495 aa22.09■■□□□ 1.13
DDB1-205ENST00000535174 TMPOP42166 694 aaKnown RBP22.09■■□□□ 1.13
DDB1-205ENST00000535174 MCM10Q7L590 875 aa22.09■■□□□ 1.13
DDB1-205ENST00000535174 CDCA7LQ96GN5 454 aa22.09■■□□□ 1.13
DDB1-205ENST00000535174 E9PSI1 815 aa22.08■■□□□ 1.13
DDB1-205ENST00000535174 APLP1P51693 650 aa22.08■■□□□ 1.13
DDB1-205ENST00000535174 SLFN5Q08AF3 891 aa22.08■■□□□ 1.13
DDB1-205ENST00000535174 PDE6BP35913 854 aa22.07■■□□□ 1.12
DDB1-205ENST00000535174 DZIP3Q86Y13 1208 aaKnown RBP22.07■■□□□ 1.12
DDB1-205ENST00000535174 TRMT2AQ8IZ69 625 aaKnown RBP22.07■■□□□ 1.12
DDB1-205ENST00000535174 ZNF622Q969S3 477 aaKnown RBP eCLIP22.07■■□□□ 1.124e-6■■□□□ 13.5
DDB1-205ENST00000535174 LMNB1P20700 586 aa22.06■■□□□ 1.12
DDB1-205ENST00000535174 PIP4K2AP48426 406 aaPredicted RBP22.06■■□□□ 1.12
DDB1-205ENST00000535174 PRR5LQ6MZQ0 368 aa22.06■■□□□ 1.12
DDB1-205ENST00000535174 CCDC24Q8N4L8 307 aa22.06■■□□□ 1.12
DDB1-205ENST00000535174 CNBD1Q8NA66 436 aa22.06■■□□□ 1.12
DDB1-205ENST00000535174 SETDB2Q96T68 719 aa22.06■■□□□ 1.12
DDB1-205ENST00000535174 SUPT16HQ9Y5B9 1047 aaKnown RBP22.06■■□□□ 1.12
DDB1-205ENST00000535174 CACNA1SQ13698 1873 aa22.06■■□□□ 1.12
DDB1-205ENST00000535174 WDR90Q96KV7 1748 aa22.06■■□□□ 1.12
DDB1-205ENST00000535174 ZC3H4Q9UPT8 1303 aaKnown RBP22.06■■□□□ 1.12
DDB1-205ENST00000535174 CAMTA2O94983 1202 aa22.05■■□□□ 1.12
DDB1-205ENST00000535174 DCTN1Q14203 1278 aa22.05■■□□□ 1.12
DDB1-205ENST00000535174 RBM46Q8TBY0 533 aaKnown RBP22.05■■□□□ 1.12
DDB1-205ENST00000535174 BRIP1Q9BX63 1249 aa22.05■■□□□ 1.12
DDB1-205ENST00000535174 PDZRN3Q9UPQ7 1066 aa22.05■■□□□ 1.12
DDB1-205ENST00000535174 RRP7AQ9Y3A4 280 aaKnown RBP22.05■■□□□ 1.12
DDB1-205ENST00000535174 CCDC88AQ3V6T2 1871 aa22.05■■□□□ 1.12
DDB1-205ENST00000535174 LAMB4A4D0S4 1761 aa22.04■■□□□ 1.12
DDB1-205ENST00000535174 ST5P78524 1137 aa22.04■■□□□ 1.12
DDB1-205ENST00000535174 NFE2L2Q16236 605 aa22.04■■□□□ 1.12
DDB1-205ENST00000535174 DUSP27Q5VZP5 1158 aa22.04■■□□□ 1.12
DDB1-205ENST00000535174 USP16Q9Y5T5 823 aa22.04■■□□□ 1.12
DDB1-205ENST00000535174 PRAMEF22A3QJZ6 481 aa22.03■■□□□ 1.12
DDB1-205ENST00000535174 SNRPA1P09661 255 aaKnown RBP22.03■■□□□ 1.12
DDB1-205ENST00000535174 NEUROD2Q15784 382 aa22.03■■□□□ 1.12
DDB1-205ENST00000535174 RRAGCQ9HB90 399 aa22.03■■□□□ 1.12
DDB1-205ENST00000535174 ZNF219Q9P2Y4 722 aaPredicted RBP22.03■■□□□ 1.12
DDB1-205ENST00000535174 IL16Q14005 1332 aa22.03■■□□□ 1.12
DDB1-205ENST00000535174 RNF123Q5XPI4 1314 aa22.03■■□□□ 1.12
DDB1-205ENST00000535174 HTATSF1O43719 755 aaKnown RBP22.02■■□□□ 1.12
DDB1-205ENST00000535174 ZNF652Q9Y2D9 606 aa22.02■■□□□ 1.12
DDB1-205ENST00000535174 RIPK4P57078 832 aa22.01■■□□□ 1.11
DDB1-205ENST00000535174 LMOD3Q0VAK6 560 aa22.01■■□□□ 1.11
DDB1-205ENST00000535174 ARFGEF2Q9Y6D5 1785 aa22■■□□□ 1.11
DDB1-205ENST00000535174 NFKBIEO00221 500 aa22■■□□□ 1.11
DDB1-205ENST00000535174 RCAN3Q9UKA8 241 aa22■■□□□ 1.11
DDB1-205ENST00000535174 TRIM35Q9UPQ4 493 aa22■■□□□ 1.11
DDB1-205ENST00000535174 C21orf2O43822 256 aa21.99■■□□□ 1.11
DDB1-205ENST00000535174 FSTL1Q12841 308 aa21.99■■□□□ 1.11
DDB1-205ENST00000535174 NBPF5PQ86XG9 351 aaPredicted RBP21.99■■□□□ 1.11
DDB1-205ENST00000535174 KDM3BQ7LBC6 1761 aa21.99■■□□□ 1.11
DDB1-205ENST00000535174 FER1L6Q2WGJ9 1857 aa21.98■■□□□ 1.11
DDB1-205ENST00000535174 PRELPP51888 382 aa21.98■■□□□ 1.11
DDB1-205ENST00000535174 CALD1Q05682 793 aaKnown RBP21.98■■□□□ 1.11
DDB1-205ENST00000535174 MYH16Q9H6N6 1097 aa21.98■■□□□ 1.11
DDB1-205ENST00000535174 GLTPD2A6NH11 291 aa21.97■■□□□ 1.11
DDB1-205ENST00000535174 TAF7Q15545 349 aaPredicted RBP21.97■■□□□ 1.11
DDB1-205ENST00000535174 ERICH6BQ5W0A0 696 aa21.97■■□□□ 1.11
DDB1-205ENST00000535174 CNKSR1Q969H4 720 aa21.97■■□□□ 1.11
DDB1-205ENST00000535174 CLEC4GQ6UXB4 293 aa21.96■■□□□ 1.11
DDB1-205ENST00000535174 SMC1BQ8NDV3 1235 aa21.96■■□□□ 1.11
DDB1-205ENST00000535174 SPINK5Q9NQ38 1064 aaPredicted RBP21.96■■□□□ 1.11
DDB1-205ENST00000535174 DICER1Q9UPY3 1922 aaKnown RBP21.96■■□□□ 1.11
DDB1-205ENST00000535174 SLX4Q8IY92 1834 aa21.95■■□□□ 1.1
DDB1-205ENST00000535174 STYK1Q6J9G0 422 aa21.95■■□□□ 1.1
DDB1-205ENST00000535174 TAOK3Q9H2K8 898 aa21.95■■□□□ 1.1
DDB1-205ENST00000535174 MIS18AQ9NYP9 233 aa21.95■■□□□ 1.1
DDB1-205ENST00000535174 PRPF40BQ6NWY9 871 aaKnown RBP21.94■■□□□ 1.1
DDB1-205ENST00000535174 MASTLQ96GX5 879 aa21.94■■□□□ 1.1
DDB1-205ENST00000535174 NIP7Q9Y221 180 aaKnown RBP eCLIP21.94■■□□□ 1.1
DDB1-205ENST00000535174 FAM177BA6PVY3 158 aa21.93■■□□□ 1.1
DDB1-205ENST00000535174 NBPF26B4DH59 902 aa21.93■■□□□ 1.1
DDB1-205ENST00000535174 SRGNP10124 158 aa21.93■■□□□ 1.1
DDB1-205ENST00000535174 VEGFAP15692 232 aaPredicted RBP21.93■■□□□ 1.1
DDB1-205ENST00000535174 ERFEQ4G0M1 354 aa21.93■■□□□ 1.1
DDB1-205ENST00000535174 SOGA3Q5TF21 947 aa21.93■■□□□ 1.1
DDB1-205ENST00000535174 DPY19L2Q6NUT2 758 aa21.93■■□□□ 1.1
DDB1-205ENST00000535174 NBPF10Q6P3W6 841 aaKnown RBP21.93■■□□□ 1.1
DDB1-205ENST00000535174 NBPF15Q8N660 670 aa21.93■■□□□ 1.1
DDB1-205ENST00000535174 HTRA3P83110 453 aa21.92■■□□□ 1.1
DDB1-205ENST00000535174 LTBP3Q9NS15 1303 aa21.91■■□□□ 1.1
DDB1-205ENST00000535174 TPTE2Q6XPS3 522 aa21.91■■□□□ 1.1
DDB1-205ENST00000535174 RGL2O15211 777 aa21.9■■□□□ 1.1
DDB1-205ENST00000535174 CT47B1P0C2W7 299 aaPredicted RBP21.9■■□□□ 1.1
DDB1-205ENST00000535174 GTF2E1P29083 439 aaPredicted RBP21.9■■□□□ 1.1
DDB1-205ENST00000535174 IFFO2Q5TF58 517 aa21.9■■□□□ 1.1
DDB1-205ENST00000535174 DNAJC5GQ8N7S2 189 aa21.89■■□□□ 1.09
DDB1-205ENST00000535174 THUMPD2Q9BTF0 503 aaKnown RBP21.89■■□□□ 1.09
DDB1-205ENST00000535174 NPR1P16066 1061 aa21.88■■□□□ 1.09
DDB1-205ENST00000535174 RRP1P56182 461 aaKnown RBP21.88■■□□□ 1.09
DDB1-205ENST00000535174 KIF6Q6ZMV9 814 aa21.88■■□□□ 1.09
DDB1-205ENST00000535174 HLFQ16534 295 aa21.87■■□□□ 1.09
DDB1-205ENST00000535174 CCDC93Q567U6 631 aa21.87■■□□□ 1.09
DDB1-205ENST00000535174 KLRG1Q96E93 195 aa21.87■■□□□ 1.09
DDB1-205ENST00000535174 NUP98P52948 1817 aa21.87■■□□□ 1.09
DDB1-205ENST00000535174 FANCIQ9NVI1 1328 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms