RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 MAP2K1Q02750 393 aaPredicted RBP13.47□□□□□ -0.25
CLSTN3-203ENST00000534830 ZNF790Q6PG37 636 aa13.47□□□□□ -0.25
CLSTN3-203ENST00000534830 ZNF496Q96IT1 587 aaPredicted RBP13.47□□□□□ -0.25
CLSTN3-203ENST00000534830 BCL2L12Q9HB09 334 aa13.47□□□□□ -0.25
CLSTN3-203ENST00000534830 ZBTB1Q9Y2K1 713 aa13.47□□□□□ -0.25
CLSTN3-203ENST00000534830 HEG1Q9ULI3 1381 aa13.46□□□□□ -0.25
CLSTN3-203ENST00000534830 PDE6BP35913 854 aa13.46□□□□□ -0.25
CLSTN3-203ENST00000534830 RGS19P49795 217 aa13.46□□□□□ -0.25
CLSTN3-203ENST00000534830 CFAP44Q96MT7 982 aa13.46□□□□□ -0.25
CLSTN3-203ENST00000534830 DLG5Q8TDM6 1919 aa13.46□□□□□ -0.25
CLSTN3-203ENST00000534830 WDR33Q9C0J8 1336 aaKnown RBP13.45□□□□□ -0.26
CLSTN3-203ENST00000534830 LTBP3Q9NS15 1303 aa13.45□□□□□ -0.26
CLSTN3-203ENST00000534830 U2AF1L5P0DN76 240 aaPredicted RBP13.45□□□□□ -0.26
CLSTN3-203ENST00000534830 EIF5P55010 431 aaKnown RBP13.45□□□□□ -0.26
CLSTN3-203ENST00000534830 U2AF1Q01081 240 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLSTN3-203ENST00000534830 TEFQ10587 303 aa13.45□□□□□ -0.26
CLSTN3-203ENST00000534830 TTC5Q8N0Z6 440 aa13.45□□□□□ -0.26
CLSTN3-203ENST00000534830 CCDC24Q8N4L8 307 aa13.45□□□□□ -0.26
CLSTN3-203ENST00000534830 ABT1Q9ULW3 272 aaKnown RBP13.45□□□□□ -0.26
CLSTN3-203ENST00000534830 PDZRN3Q9UPQ7 1066 aa13.45□□□□□ -0.26
CLSTN3-203ENST00000534830 SCN4AP35499 1836 aa13.45□□□□□ -0.26
CLSTN3-203ENST00000534830 ANKRD31Q8N7Z5 1873 aa13.44□□□□□ -0.26
CLSTN3-203ENST00000534830 RASSF10A6NK89 507 aa13.44□□□□□ -0.26
CLSTN3-203ENST00000534830 KCNQ3O43525 872 aa13.44□□□□□ -0.26
CLSTN3-203ENST00000534830 L3MBTL3Q96JM7 780 aaPredicted RBP13.44□□□□□ -0.26
CLSTN3-203ENST00000534830 BEGAINQ9BUH8 593 aa13.44□□□□□ -0.26
CLSTN3-203ENST00000534830 BRIP1Q9BX63 1249 aa13.44□□□□□ -0.26
CLSTN3-203ENST00000534830 TEX13AQ9BXU3 409 aaPredicted RBP13.44□□□□□ -0.26
CLSTN3-203ENST00000534830 CACNA1SQ13698 1873 aa13.44□□□□□ -0.26
CLSTN3-203ENST00000534830 NPHP1O15259 732 aa13.43□□□□□ -0.26
CLSTN3-203ENST00000534830 HTATSF1O43719 755 aaKnown RBP13.43□□□□□ -0.26
CLSTN3-203ENST00000534830 STARD3NLO95772 234 aa13.43□□□□□ -0.26
CLSTN3-203ENST00000534830 CANXP27824 592 aaKnown RBP13.43□□□□□ -0.26
CLSTN3-203ENST00000534830 COL11A2P13942 1736 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-203ENST00000534830 SLX4Q8IY92 1834 aa13.42□□□□□ -0.26
CLSTN3-203ENST00000534830 BTBD11A6QL63 1104 aa13.42□□□□□ -0.26
CLSTN3-203ENST00000534830 GRM1Q13255 1194 aa13.42□□□□□ -0.26
CLSTN3-203ENST00000534830 SOGA3Q5TF21 947 aa13.42□□□□□ -0.26
CLSTN3-203ENST00000534830 TBC1D9BQ66K14 1250 aa13.42□□□□□ -0.26
CLSTN3-203ENST00000534830 MAP1SQ66K74 1059 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-203ENST00000534830 PAXIP1Q6ZW49 1069 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-203ENST00000534830 CNTROBQ8N137 903 aa13.42□□□□□ -0.26
CLSTN3-203ENST00000534830 CNKSR1Q969H4 720 aa13.42□□□□□ -0.26
CLSTN3-203ENST00000534830 FMNL2Q96PY5 1086 aa13.42□□□□□ -0.26
CLSTN3-203ENST00000534830 PLEKHF1Q96S99 279 aa13.42□□□□□ -0.26
CLSTN3-203ENST00000534830 HACL1Q9UJ83 578 aa13.42□□□□□ -0.26
CLSTN3-203ENST00000534830 SCN7AQ01118 1682 aa13.41□□□□□ -0.26
CLSTN3-203ENST00000534830 EPHX2P34913 555 aa13.41□□□□□ -0.26
CLSTN3-203ENST00000534830 PRR5LQ6MZQ0 368 aa13.41□□□□□ -0.26
CLSTN3-203ENST00000534830 PRPF40BQ6NWY9 871 aaKnown RBP13.41□□□□□ -0.26
CLSTN3-203ENST00000534830 A0A087WZG4 1122 aa13.4□□□□□ -0.26
CLSTN3-203ENST00000534830 IL6STP40189 918 aaPredicted RBP13.4□□□□□ -0.26
CLSTN3-203ENST00000534830 MCM10Q7L590 875 aa13.4□□□□□ -0.26
CLSTN3-203ENST00000534830 TSKSQ9UJT2 592 aa13.4□□□□□ -0.26
CLSTN3-203ENST00000534830 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
CLSTN3-203ENST00000534830 A1BGP04217 495 aa13.39□□□□□ -0.27
CLSTN3-203ENST00000534830 DCTN1Q14203 1278 aa13.39□□□□□ -0.27
CLSTN3-203ENST00000534830 STYK1Q6J9G0 422 aa13.39□□□□□ -0.27
CLSTN3-203ENST00000534830 PNMA8AQ86V59 439 aaPredicted RBP13.39□□□□□ -0.27
CLSTN3-203ENST00000534830 CAPNS2Q96L46 248 aa13.39□□□□□ -0.27
CLSTN3-203ENST00000534830 ZNF330Q9Y3S2 320 aaPredicted RBP13.39□□□□□ -0.27
CLSTN3-203ENST00000534830 USP16Q9Y5T5 823 aa13.39□□□□□ -0.27
CLSTN3-203ENST00000534830 BCORQ6W2J9 1755 aa13.39□□□□□ -0.27
CLSTN3-203ENST00000534830 RNF123Q5XPI4 1314 aa13.39□□□□□ -0.27
CLSTN3-203ENST00000534830 PRAMEF22A3QJZ6 481 aa13.38□□□□□ -0.27
CLSTN3-203ENST00000534830 SRGNP10124 158 aa13.38□□□□□ -0.27
CLSTN3-203ENST00000534830 ECE1P42892 770 aa13.38□□□□□ -0.27
CLSTN3-203ENST00000534830 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
CLSTN3-203ENST00000534830 RTF1Q92541 710 aaKnown RBP13.38□□□□□ -0.27
CLSTN3-203ENST00000534830 MASTLQ96GX5 879 aa13.38□□□□□ -0.27
CLSTN3-203ENST00000534830 GPR101Q96P66 508 aaPredicted RBP13.38□□□□□ -0.27
CLSTN3-203ENST00000534830 ZNF277Q9NRM2 450 aaPredicted RBP13.38□□□□□ -0.27
CLSTN3-203ENST00000534830 PDE4DIPQ5VU43 2346 aa13.38□□□□□ -0.27
CLSTN3-203ENST00000534830 KDM3BQ7LBC6 1761 aa13.37□□□□□ -0.27
CLSTN3-203ENST00000534830 ST5P78524 1137 aa13.37□□□□□ -0.27
CLSTN3-203ENST00000534830 TAF7Q15545 349 aaPredicted RBP13.37□□□□□ -0.27
CLSTN3-203ENST00000534830 CCDC93Q567U6 631 aa13.37□□□□□ -0.27
CLSTN3-203ENST00000534830 CYP4F22Q6NT55 531 aa13.37□□□□□ -0.27
CLSTN3-203ENST00000534830 DDX21Q9NR30 783 aaKnown RBP eCLIP13.37□□□□□ -0.27
CLSTN3-203ENST00000534830 TBC1D2BQ9UPU7 963 aa13.37□□□□□ -0.27
CLSTN3-203ENST00000534830 ADAMTSL1Q8N6G6 1762 aa13.37□□□□□ -0.27
CLSTN3-203ENST00000534830 CAMTA2O94983 1202 aa13.36□□□□□ -0.27
CLSTN3-203ENST00000534830 SNRPA1P09661 255 aaKnown RBP13.36□□□□□ -0.27
CLSTN3-203ENST00000534830 RALBP1Q15311 655 aa13.36□□□□□ -0.27
CLSTN3-203ENST00000534830 SETDB2Q96T68 719 aa13.36□□□□□ -0.27
CLSTN3-203ENST00000534830 MCOLN1Q9GZU1 580 aa13.36□□□□□ -0.27
CLSTN3-203ENST00000534830 CASP8AP2Q9UKL3 1982 aa13.36□□□□□ -0.27
CLSTN3-203ENST00000534830 ARFGEF2Q9Y6D5 1785 aa13.35□□□□□ -0.27
CLSTN3-203ENST00000534830 FKBP4Q02790 459 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLSTN3-203ENST00000534830 LAMB4A4D0S4 1761 aa13.35□□□□□ -0.27
CLSTN3-203ENST00000534830 FMR1Q06787 632 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLSTN3-203ENST00000534830 NFE2L2Q16236 605 aa13.34□□□□□ -0.27
CLSTN3-203ENST00000534830 NPM2Q86SE8 214 aaKnown RBP13.34□□□□□ -0.27
CLSTN3-203ENST00000534830 THSD7BQ9C0I4 1608 aa13.33□□□□□ -0.28
CLSTN3-203ENST00000534830 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
CLSTN3-203ENST00000534830 AOC2O75106 756 aa13.33□□□□□ -0.28
CLSTN3-203ENST00000534830 NBPF10Q6P3W6 841 aaKnown RBP13.33□□□□□ -0.28
CLSTN3-203ENST00000534830 CLEC4GQ6UXB4 293 aa13.33□□□□□ -0.28
CLSTN3-203ENST00000534830 NBPF15Q8N660 670 aa13.33□□□□□ -0.28
CLSTN3-203ENST00000534830 C7orf43Q8WVR3 580 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms