RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 VAMP4O75379 141 aa32.01■■■□□ 2.71
USP48-214ENST00000532737 TRMT2AQ8IZ69 625 aaKnown RBP32.01■■■□□ 2.71
USP48-214ENST00000532737 CCDC30Q5VVM6 783 aa32■■■□□ 2.71
USP48-214ENST00000532737 TCERG1O14776 1098 aaKnown RBP31.99■■■□□ 2.71
USP48-214ENST00000532737 TM4SF1P30408 202 aa31.99■■■□□ 2.71
USP48-214ENST00000532737 COPS6Q7L5N1 327 aa31.98■■■□□ 2.71
USP48-214ENST00000532737 XAGE3Q8WTP9 111 aa31.98■■■□□ 2.71
USP48-214ENST00000532737 CHMP4AQ9BY43 222 aa31.98■■■□□ 2.71
USP48-214ENST00000532737 DDR1Q08345 913 aa31.97■■■□□ 2.71
USP48-214ENST00000532737 AIMP1Q12904 312 aaKnown RBP31.97■■■□□ 2.71
USP48-214ENST00000532737 NFIXQ14938 502 aa31.97■■■□□ 2.71
USP48-214ENST00000532737 HYPKQ9NX55 129 aa31.97■■■□□ 2.71
USP48-214ENST00000532737 MAP3K15Q6ZN16 1313 aa31.97■■■□□ 2.71
USP48-214ENST00000532737 GOLGB1Q14789 3259 aaKnown RBP31.96■■■□□ 2.71
USP48-214ENST00000532737 HLFQ16534 295 aa31.96■■■□□ 2.71
USP48-214ENST00000532737 TBC1D9BQ66K14 1250 aa31.96■■■□□ 2.71
USP48-214ENST00000532737 KIF6Q6ZMV9 814 aa31.96■■■□□ 2.71
USP48-214ENST00000532737 KLHL34Q8N239 644 aa31.96■■■□□ 2.71
USP48-214ENST00000532737 ZBTB3Q9H5J0 574 aa31.95■■■□□ 2.71
USP48-214ENST00000532737 SCN7AQ01118 1682 aa31.95■■■□□ 2.7
USP48-214ENST00000532737 ERVV-1B6SEH8 477 aa31.94■■■□□ 2.7
USP48-214ENST00000532737 CLEC4GQ6UXB4 293 aa31.94■■■□□ 2.7
USP48-214ENST00000532737 BICDL1Q6ZP65 573 aa31.94■■■□□ 2.7
USP48-214ENST00000532737 RGL2O15211 777 aa31.93■■■□□ 2.7
USP48-214ENST00000532737 GPR162Q16538 588 aa31.93■■■□□ 2.7
USP48-214ENST00000532737 NLGN2Q8NFZ4 835 aa31.93■■■□□ 2.7
USP48-214ENST00000532737 PHAXQ9H814 394 aaKnown RBP31.93■■■□□ 2.7
USP48-214ENST00000532737 ZBED9Q6R2W3 1325 aa31.93■■■□□ 2.7
USP48-214ENST00000532737 POLRMTO00411 1230 aaKnown RBP31.92■■■□□ 2.7
USP48-214ENST00000532737 ZNF652Q9Y2D9 606 aa31.92■■■□□ 2.7
USP48-214ENST00000532737 PARP3Q9Y6F1 533 aa31.92■■■□□ 2.7
USP48-214ENST00000532737 STK31Q9BXU1 1019 aa31.91■■■□□ 2.7
USP48-214ENST00000532737 BCORQ6W2J9 1755 aa31.91■■■□□ 2.7
USP48-214ENST00000532737 SLC4A2P04920 1241 aa31.89■■■□□ 2.7
USP48-214ENST00000532737 SERPINB2P05120 415 aa31.87■■■□□ 2.69
USP48-214ENST00000532737 GIGYF2Q6Y7W6 1299 aaKnown RBP31.87■■■□□ 2.69
USP48-214ENST00000532737 SETDB2Q96T68 719 aa31.87■■■□□ 2.69
USP48-214ENST00000532737 ANKRD13DQ6ZTN6 518 aa31.86■■■□□ 2.69
USP48-214ENST00000532737 G2E3Q7L622 706 aa31.86■■■□□ 2.69
USP48-214ENST00000532737 NIP7Q9Y221 180 aaKnown RBP eCLIP31.86■■■□□ 2.69
USP48-214ENST00000532737 PLBD2Q8NHP8 589 aa31.85■■■□□ 2.69
USP48-214ENST00000532737 PELP1Q8IZL8 1130 aaKnown RBP31.83■■■□□ 2.69
USP48-214ENST00000532737 CARMIL3Q8ND23 1372 aa31.82■■■□□ 2.69
USP48-214ENST00000532737 GPTP24298 496 aa31.82■■■□□ 2.68
USP48-214ENST00000532737 ZNF34Q8IZ26 560 aa31.82■■■□□ 2.68
USP48-214ENST00000532737 CD2APQ9Y5K6 639 aa31.82■■■□□ 2.68
USP48-214ENST00000532737 ATP10DQ9P241 1426 aa31.82■■■□□ 2.68
USP48-214ENST00000532737 YBX3P16989 372 aaKnown RBP eCLIP31.8■■■□□ 2.681e-13■□□□□ 10.6
USP48-214ENST00000532737 FLIIQ13045 1269 aa31.79■■■□□ 2.68
USP48-214ENST00000532737 TCIRG1Q13488 830 aa31.79■■■□□ 2.68
USP48-214ENST00000532737 RIC3Q7Z5B4 369 aa31.79■■■□□ 2.68
USP48-214ENST00000532737 NUP98P52948 1817 aa31.79■■■□□ 2.68
USP48-214ENST00000532737 UBN2Q6ZU65 1347 aa31.78■■■□□ 2.68
USP48-214ENST00000532737 C10orf71Q711Q0 1435 aa31.78■■■□□ 2.68
USP48-214ENST00000532737 HSP90AB3PQ58FF7 597 aa31.78■■■□□ 2.68
USP48-214ENST00000532737 FAM177BA6PVY3 158 aa31.77■■■□□ 2.68
USP48-214ENST00000532737 DDX58O95786 925 aaKnown RBP31.77■■■□□ 2.68
USP48-214ENST00000532737 CT47B1P0C2W7 299 aaPredicted RBP31.77■■■□□ 2.68
USP48-214ENST00000532737 PRR5LQ6MZQ0 368 aa31.77■■■□□ 2.68
USP48-214ENST00000532737 SSH1Q8WYL5 1049 aa31.77■■■□□ 2.68
USP48-214ENST00000532737 ZNF428Q96B54 188 aa31.77■■■□□ 2.68
USP48-214ENST00000532737 NBPF5PQ86XG9 351 aaPredicted RBP31.76■■■□□ 2.67
USP48-214ENST00000532737 CCDC24Q8N4L8 307 aa31.76■■■□□ 2.67
USP48-214ENST00000532737 PI4KAP2A4QPH2 592 aa31.75■■■□□ 2.67
USP48-214ENST00000532737 SUSD4Q5VX71 490 aa31.75■■■□□ 2.67
USP48-214ENST00000532737 KSR2Q6VAB6 950 aa31.75■■■□□ 2.67
USP48-214ENST00000532737 MRPL50Q8N5N7 158 aaKnown RBP31.75■■■□□ 2.67
USP48-214ENST00000532737 PI4KAP1Q8N8J0 262 aa31.75■■■□□ 2.67
USP48-214ENST00000532737 NRXN2Q9P2S2 1712 aa31.75■■■□□ 2.67
USP48-214ENST00000532737 CNBD1Q8NA66 436 aa31.74■■■□□ 2.67
USP48-214ENST00000532737 MAP3K2Q9Y2U5 619 aa31.74■■■□□ 2.67
USP48-214ENST00000532737 AFDNP55196 1824 aaKnown RBP31.74■■■□□ 2.67
USP48-214ENST00000532737 ADCY9O60503 1353 aa31.73■■■□□ 2.67
USP48-214ENST00000532737 PARP10Q53GL7 1025 aa31.73■■■□□ 2.67
USP48-214ENST00000532737 ISCA1Q9BUE6 129 aa31.73■■■□□ 2.67
USP48-214ENST00000532737 BCL2L13Q9BXK5 485 aa31.73■■■□□ 2.67
USP48-214ENST00000532737 ATP5J2-PTCD1G3V325 749 aa31.72■■■□□ 2.67
USP48-214ENST00000532737 FKBP5Q13451 457 aaPredicted RBP31.72■■■□□ 2.67
USP48-214ENST00000532737 ALDH1L2Q3SY69 923 aa31.72■■■□□ 2.67
USP48-214ENST00000532737 TPTE2Q6XPS3 522 aa31.72■■■□□ 2.67
USP48-214ENST00000532737 NLRP10Q86W26 655 aa31.72■■■□□ 2.67
USP48-214ENST00000532737 GRIN3BO60391 1043 aa31.71■■■□□ 2.67
USP48-214ENST00000532737 METTL22Q9BUU2 404 aaPredicted RBP31.71■■■□□ 2.67
USP48-214ENST00000532737 NPHP1O15259 732 aa31.7■■■□□ 2.67
USP48-214ENST00000532737 MYD88Q99836 296 aa31.7■■■□□ 2.67
USP48-214ENST00000532737 NTSR2O95665 410 aa31.69■■■□□ 2.66
USP48-214ENST00000532737 C1QTNF8P60827 252 aa31.69■■■□□ 2.66
USP48-214ENST00000532737 TGFB2P61812 414 aa31.69■■■□□ 2.66
USP48-214ENST00000532737 YTHDC1Q96MU7 727 aaKnown RBP31.69■■■□□ 2.66
USP48-214ENST00000532737 NYXQ9GZU5 481 aa31.69■■■□□ 2.66
USP48-214ENST00000532737 SMC4Q9NTJ3 1288 aa31.69■■■□□ 2.66
USP48-214ENST00000532737 RARSP54136 660 aaKnown RBP31.68■■■□□ 2.66
USP48-214ENST00000532737 ST5P78524 1137 aa31.68■■■□□ 2.66
USP48-214ENST00000532737 TRIM28Q13263 835 aaKnown RBP31.68■■■□□ 2.66
USP48-214ENST00000532737 NUTM1Q86Y26 1132 aa31.68■■■□□ 2.66
USP48-214ENST00000532737 BRIP1Q9BX63 1249 aa31.68■■■□□ 2.66
USP48-214ENST00000532737 CACNA1FO60840 1977 aa31.68■■■□□ 2.66
USP48-214ENST00000532737 ARFGEF2Q9Y6D5 1785 aa31.68■■■□□ 2.66
USP48-214ENST00000532737 KIF13BQ9NQT8 1826 aa31.68■■■□□ 2.66
USP48-214ENST00000532737 A0A0G2JLW4 131 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms