RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 MAP3K11Q16584 847 aa21.55■■□□□ 1.04
RPL38-205ENST00000530646 CERS3Q8IU89 383 aa21.55■■□□□ 1.04
RPL38-205ENST00000530646 LRRCC1Q9C099 1032 aa21.55■■□□□ 1.04
RPL38-205ENST00000530646 CALCOCO1Q9P1Z2 691 aa21.55■■□□□ 1.04
RPL38-205ENST00000530646 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.55■■□□□ 1.04
RPL38-205ENST00000530646 LIMCH1Q9UPQ0 1083 aa21.55■■□□□ 1.04
RPL38-205ENST00000530646 V9GYY5 206 aaPredicted RBP21.55■■□□□ 1.04
RPL38-205ENST00000530646 CAMK4Q16566 473 aa21.54■■□□□ 1.04
RPL38-205ENST00000530646 FBXO38Q6PIJ6 1188 aa21.54■■□□□ 1.04
RPL38-205ENST00000530646 NME9Q86XW9 330 aa21.54■■□□□ 1.04
RPL38-205ENST00000530646 ARHGAP23Q9P227 1491 aa21.54■■□□□ 1.04
RPL38-205ENST00000530646 SNX14Q9Y5W7 946 aa21.54■■□□□ 1.04
RPL38-205ENST00000530646 EMILIN1Q9Y6C2 1016 aa21.54■■□□□ 1.04
RPL38-205ENST00000530646 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.54■■□□□ 1.04
RPL38-205ENST00000530646 TRIM34Q9BYJ4 488 aa21.54■■□□□ 1.04
RPL38-205ENST00000530646 SLIT1O75093 1534 aa21.54■■□□□ 1.04
RPL38-205ENST00000530646 TRIM5Q9C035 493 aa21.53■■□□□ 1.04
RPL38-205ENST00000530646 CPS1P31327 1500 aa21.53■■□□□ 1.04
RPL38-205ENST00000530646 EPB41L2O43491 1005 aaKnown RBP21.53■■□□□ 1.04
RPL38-205ENST00000530646 LARGE1O95461 756 aa21.53■■□□□ 1.04
RPL38-205ENST00000530646 ANO6Q4KMQ2 910 aa21.53■■□□□ 1.04
RPL38-205ENST00000530646 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.53■■□□□ 1.04
RPL38-205ENST00000530646 STAP2Q9UGK3 403 aa21.53■■□□□ 1.04
RPL38-205ENST00000530646 LIG1P18858 919 aa21.52■■□□□ 1.04
RPL38-205ENST00000530646 CCDC144BQ3MJ40 725 aa21.52■■□□□ 1.04
RPL38-205ENST00000530646 CCDC144CPQ8IYA2 1237 aa21.52■■□□□ 1.04
RPL38-205ENST00000530646 NUP62CLQ9H1M0 184 aa21.52■■□□□ 1.04
RPL38-205ENST00000530646 GJB2P29033 226 aa21.52■■□□□ 1.04
RPL38-205ENST00000530646 CHMP3Q9Y3E7 222 aa21.52■■□□□ 1.04
RPL38-205ENST00000530646 CCDC61Q9Y6R9 512 aa21.52■■□□□ 1.04
RPL38-205ENST00000530646 RAD50Q92878 1312 aa21.51■■□□□ 1.03
RPL38-205ENST00000530646 USP27XA6NNY8 438 aa21.51■■□□□ 1.03
RPL38-205ENST00000530646 CKAP2LQ8IYA6 745 aa21.51■■□□□ 1.03
RPL38-205ENST00000530646 RASEFQ8IZ41 740 aa21.51■■□□□ 1.03
RPL38-205ENST00000530646 TRERF1Q96PN7 1200 aa21.51■■□□□ 1.03
RPL38-205ENST00000530646 ZNF446Q9NWS9 450 aa21.51■■□□□ 1.03
RPL38-205ENST00000530646 ERBB3P21860 1342 aa21.5■■□□□ 1.03
RPL38-205ENST00000530646 CDK12Q9NYV4 1490 aaPredicted RBP21.5■■□□□ 1.03
RPL38-205ENST00000530646 FAM193AP78312 1265 aa21.5■■□□□ 1.03
RPL38-205ENST00000530646 ELF2Q15723 593 aa21.5■■□□□ 1.03
RPL38-205ENST00000530646 TTC6Q86TZ1 520 aa21.5■■□□□ 1.03
RPL38-205ENST00000530646 IRX3P78415 501 aaPredicted RBP21.5■■□□□ 1.03
RPL38-205ENST00000530646 KIF1BPQ96EK5 621 aa21.5■■□□□ 1.03
RPL38-205ENST00000530646 CLIP2Q9UDT6 1046 aa21.5■■□□□ 1.03
RPL38-205ENST00000530646 CEP170BQ9Y4F5 1589 aaPredicted RBP21.49■■□□□ 1.03
RPL38-205ENST00000530646 KCNA6P17658 529 aa21.49■■□□□ 1.03
RPL38-205ENST00000530646 HAP1P54257 671 aaPredicted RBP21.49■■□□□ 1.03
RPL38-205ENST00000530646 SLC4A10Q6U841 1118 aa21.49■■□□□ 1.03
RPL38-205ENST00000530646 TDRD7Q8NHU6 1098 aaKnown RBP21.49■■□□□ 1.03
RPL38-205ENST00000530646 RTF1Q92541 710 aaKnown RBP21.49■■□□□ 1.03
RPL38-205ENST00000530646 F6X3S4 739 aa21.49■■□□□ 1.03
RPL38-205ENST00000530646 SLC4A2P04920 1241 aa21.49■■□□□ 1.03
RPL38-205ENST00000530646 SLFNL1Q499Z3 407 aa21.49■■□□□ 1.03
RPL38-205ENST00000530646 NYAP1Q6ZVC0 841 aa21.49■■□□□ 1.03
RPL38-205ENST00000530646 CCDC83Q8IWF9 413 aa21.49■■□□□ 1.03
RPL38-205ENST00000530646 SIRT1Q96EB6 747 aa21.49■■□□□ 1.03
RPL38-205ENST00000530646 TBX22Q9Y458 520 aa21.49■■□□□ 1.03
RPL38-205ENST00000530646 CPA1P15085 419 aa21.48■■□□□ 1.03
RPL38-205ENST00000530646 ERO1AQ96HE7 468 aa21.48■■□□□ 1.03
RPL38-205ENST00000530646 ATP7BP35670 1465 aa21.48■■□□□ 1.03
RPL38-205ENST00000530646 CHL1O00533 1208 aa21.48■■□□□ 1.03
RPL38-205ENST00000530646 GNAI2P04899 355 aa21.48■■□□□ 1.03
RPL38-205ENST00000530646 FEZ2Q9UHY8 353 aaPredicted RBP21.48■■□□□ 1.03
RPL38-205ENST00000530646 CCDC171Q6TFL3 1326 aa21.47■■□□□ 1.03
RPL38-205ENST00000530646 PNMA6EA0A0J9YXQ4 647 aa21.47■■□□□ 1.03
RPL38-205ENST00000530646 CYP2C19P33261 490 aa21.47■■□□□ 1.03
RPL38-205ENST00000530646 TNMDQ9H2S6 317 aa21.47■■□□□ 1.03
RPL38-205ENST00000530646 VPS37CA5D8V6 355 aaPredicted RBP21.47■■□□□ 1.03
RPL38-205ENST00000530646 G2E3Q7L622 706 aa21.47■■□□□ 1.03
RPL38-205ENST00000530646 CREBRFQ8IUR6 639 aa21.47■■□□□ 1.03
RPL38-205ENST00000530646 ZFP91Q96JP5 570 aaPredicted RBP21.47■■□□□ 1.03
RPL38-205ENST00000530646 HYPKQ9NX55 129 aa21.47■■□□□ 1.03
RPL38-205ENST00000530646 AEBP1Q8IUX7 1158 aa21.46■■□□□ 1.03
RPL38-205ENST00000530646 LRRC8AQ8IWT6 810 aa21.46■■□□□ 1.03
RPL38-205ENST00000530646 LSG1Q9H089 658 aaKnown RBP21.46■■□□□ 1.03
RPL38-205ENST00000530646 ARID5BQ14865 1188 aa21.46■■□□□ 1.03
RPL38-205ENST00000530646 PTPN14Q15678 1187 aa21.46■■□□□ 1.03
RPL38-205ENST00000530646 DACT1Q9NYF0 836 aa21.46■■□□□ 1.03
RPL38-205ENST00000530646 SGSM2O43147 1006 aa21.45■■□□□ 1.02
RPL38-205ENST00000530646 CCT4P50991 539 aaKnown RBP21.45■■□□□ 1.02
RPL38-205ENST00000530646 NOL10Q9BSC4 688 aaKnown RBP21.45■■□□□ 1.02
RPL38-205ENST00000530646 HNRNPH2P55795 449 aaKnown RBP21.45■■□□□ 1.02
RPL38-205ENST00000530646 RGS22Q8NE09 1264 aa21.45■■□□□ 1.02
RPL38-205ENST00000530646 MAP4K4O95819 1239 aaPredicted RBP21.44■■□□□ 1.02
RPL38-205ENST00000530646 CDC25BP30305 580 aa21.44■■□□□ 1.02
RPL38-205ENST00000530646 ST3GAL1Q11201 340 aa21.44■■□□□ 1.02
RPL38-205ENST00000530646 RBM43Q6ZSC3 357 aaKnown RBP21.44■■□□□ 1.02
RPL38-205ENST00000530646 ZBTB9Q96C00 473 aa21.44■■□□□ 1.02
RPL38-205ENST00000530646 ELP1O95163 1332 aa21.43■■□□□ 1.02
RPL38-205ENST00000530646 ACEP12821 1306 aa21.43■■□□□ 1.02
RPL38-205ENST00000530646 CASTP20810 708 aaKnown RBP21.43■■□□□ 1.02
RPL38-205ENST00000530646 KRT85P78386 507 aa21.43■■□□□ 1.02
RPL38-205ENST00000530646 RRS1Q15050 365 aaKnown RBP21.43■■□□□ 1.02
RPL38-205ENST00000530646 FAM173BQ6P4H8 233 aa21.43■■□□□ 1.02
RPL38-205ENST00000530646 ADAMTSL3P82987 1691 aa21.43■■□□□ 1.02
RPL38-205ENST00000530646 AOX1Q06278 1338 aa21.43■■□□□ 1.02
RPL38-205ENST00000530646 ZNF165P49910 485 aa21.43■■□□□ 1.02
RPL38-205ENST00000530646 DNAJC25Q9H1X3 360 aa21.43■■□□□ 1.02
RPL38-205ENST00000530646 SOX12O15370 315 aa21.42■■□□□ 1.02
RPL38-205ENST00000530646 SLU7O95391 586 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms