RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 MARCH10Q8NA82 808 aaPredicted RBP11.49□□□□□ -0.57
POLB-216ENST00000530566 MINK1Q8N4C8 1332 aaPredicted RBP11.49□□□□□ -0.57
POLB-216ENST00000530566 TULP4Q9NRJ4 1543 aa11.49□□□□□ -0.57
POLB-216ENST00000530566 THAP11Q96EK4 314 aa11.48□□□□□ -0.57
POLB-216ENST00000530566 BCL9O00512 1426 aa11.48□□□□□ -0.57
POLB-216ENST00000530566 LRRC37A3O60309 1634 aa11.48□□□□□ -0.57
POLB-216ENST00000530566 PAPPAQ13219 1627 aa11.47□□□□□ -0.57
POLB-216ENST00000530566 Q3C1V9 767 aa11.47□□□□□ -0.57
POLB-216ENST00000530566 TMEM132EQ6IEE7 984 aa11.47□□□□□ -0.57
POLB-216ENST00000530566 NMRK2Q9NPI5 230 aa11.47□□□□□ -0.57
POLB-216ENST00000530566 COL24A1Q17RW2 1714 aa11.46□□□□□ -0.57
POLB-216ENST00000530566 ANKARQ7Z5J8 1434 aa11.46□□□□□ -0.57
POLB-216ENST00000530566 DGAT1O75907 488 aa11.46□□□□□ -0.57
POLB-216ENST00000530566 NGDNQ8NEJ9 315 aaKnown RBP11.46□□□□□ -0.57
POLB-216ENST00000530566 PHRF1Q9P1Y6 1649 aaKnown RBP11.46□□□□□ -0.58
POLB-216ENST00000530566 CRB1P82279 1406 aa11.45□□□□□ -0.58
POLB-216ENST00000530566 PNPLA7Q6ZV29 1317 aa11.45□□□□□ -0.58
POLB-216ENST00000530566 CD46P15529 392 aa11.45□□□□□ -0.58
POLB-216ENST00000530566 RPIAP49247 311 aa11.45□□□□□ -0.58
POLB-216ENST00000530566 BRICD5Q6PL45 260 aa11.45□□□□□ -0.58
POLB-216ENST00000530566 CD2APQ9Y5K6 639 aa11.45□□□□□ -0.58
POLB-216ENST00000530566 KNDC1Q76NI1 1749 aa11.45□□□□□ -0.58
POLB-216ENST00000530566 ANKRD30BQ9BXX2 1392 aa11.44□□□□□ -0.58
POLB-216ENST00000530566 USP19O94966 1318 aa11.44□□□□□ -0.58
POLB-216ENST00000530566 CD2BP2O95400 341 aaKnown RBP11.44□□□□□ -0.58
POLB-216ENST00000530566 FAM50AQ14320 339 aaKnown RBP11.44□□□□□ -0.58
POLB-216ENST00000530566 PLA2G2CQ5R387 149 aa11.44□□□□□ -0.58
POLB-216ENST00000530566 NUTM2GQ5VZR2 741 aa11.44□□□□□ -0.58
POLB-216ENST00000530566 SIRT1Q96EB6 747 aa11.44□□□□□ -0.58
POLB-216ENST00000530566 TFCP2L1Q9NZI6 479 aa11.44□□□□□ -0.58
POLB-216ENST00000530566 FCF1Q9Y324 198 aaKnown RBP11.44□□□□□ -0.58
POLB-216ENST00000530566 GDF9O60383 454 aa11.43□□□□□ -0.58
POLB-216ENST00000530566 SAFB2Q14151 953 aaKnown RBP eCLIP11.43□□□□□ -0.58
POLB-216ENST00000530566 MSS51Q4VC12 460 aa11.43□□□□□ -0.58
POLB-216ENST00000530566 AKAP12Q02952 1782 aa11.42□□□□□ -0.58
POLB-216ENST00000530566 KDM4AO75164 1064 aa11.42□□□□□ -0.58
POLB-216ENST00000530566 USP46P62068 366 aa11.42□□□□□ -0.58
POLB-216ENST00000530566 MDM2Q00987 491 aaPredicted RBP11.42□□□□□ -0.58
POLB-216ENST00000530566 FAM160A2Q8N612 972 aaPredicted RBP11.42□□□□□ -0.58
POLB-216ENST00000530566 CDCA7Q9BWT1 371 aaPredicted RBP11.42□□□□□ -0.58
POLB-216ENST00000530566 LRRC4BQ9NT99 713 aa11.42□□□□□ -0.58
POLB-216ENST00000530566 COL5A2P05997 1499 aaPredicted RBP11.42□□□□□ -0.58
POLB-216ENST00000530566 LMO7Q8WWI1 1683 aa11.42□□□□□ -0.58
POLB-216ENST00000530566 YTHDC2Q9H6S0 1430 aaKnown RBP11.42□□□□□ -0.58
POLB-216ENST00000530566 PPLO60437 1756 aa11.41□□□□□ -0.58
POLB-216ENST00000530566 TNFRSF10AO00220 468 aa11.41□□□□□ -0.58
POLB-216ENST00000530566 ZNF787Q6DD87 383 aa11.41□□□□□ -0.58
POLB-216ENST00000530566 TOM1L2Q6ZVM7 507 aa11.41□□□□□ -0.58
POLB-216ENST00000530566 KRI1Q8N9T8 703 aaKnown RBP11.41□□□□□ -0.58
POLB-216ENST00000530566 HIRIP3Q9BW71 556 aaPredicted RBP11.41□□□□□ -0.58
POLB-216ENST00000530566 PRDM10Q9NQV6 1147 aa11.41□□□□□ -0.58
POLB-216ENST00000530566 BRD4O60885 1362 aaPredicted RBP11.41□□□□□ -0.58
POLB-216ENST00000530566 CPDO75976 1380 aa11.41□□□□□ -0.58
POLB-216ENST00000530566 QSER1Q2KHR3 1735 aa11.4□□□□□ -0.58
POLB-216ENST00000530566 ADGRF5Q8IZF2 1346 aa11.4□□□□□ -0.58
POLB-216ENST00000530566 FAM187AA6NFU0 413 aa11.4□□□□□ -0.58
POLB-216ENST00000530566 ZBTB24O43167 697 aaPredicted RBP11.4□□□□□ -0.58
POLB-216ENST00000530566 CLCN1P35523 988 aa11.4□□□□□ -0.58
POLB-216ENST00000530566 CCDC102AQ96A19 550 aa11.4□□□□□ -0.58
POLB-216ENST00000530566 ABHD8Q96I13 439 aa11.4□□□□□ -0.58
POLB-216ENST00000530566 VPS8Q8N3P4 1428 aa11.39□□□□□ -0.59
POLB-216ENST00000530566 ACSBG1Q96GR2 724 aa11.39□□□□□ -0.59
POLB-216ENST00000530566 GPCPD1Q9NPB8 672 aa11.39□□□□□ -0.59
POLB-216ENST00000530566 KIAA1210Q9ULL0 1709 aa11.39□□□□□ -0.59
POLB-216ENST00000530566 IGSF1Q8N6C5 1336 aa11.38□□□□□ -0.59
POLB-216ENST00000530566 EXOC5O00471 708 aa11.38□□□□□ -0.59
POLB-216ENST00000530566 RNF19BQ6ZMZ0 732 aa11.38□□□□□ -0.59
POLB-216ENST00000530566 PRAM1Q96QH2 718 aa11.38□□□□□ -0.59
POLB-216ENST00000530566 ZBTB7CA1YPR0 619 aa11.37□□□□□ -0.59
POLB-216ENST00000530566 RGS19P49795 217 aa11.37□□□□□ -0.59
POLB-216ENST00000530566 FOXC1Q12948 553 aa11.37□□□□□ -0.59
POLB-216ENST00000530566 SLC27A3Q5K4L6 730 aa11.37□□□□□ -0.59
POLB-216ENST00000530566 MSL1Q68DK7 614 aa11.37□□□□□ -0.59
POLB-216ENST00000530566 SMC1BQ8NDV3 1235 aa11.37□□□□□ -0.59
POLB-216ENST00000530566 POGKQ9P215 609 aa11.37□□□□□ -0.59
POLB-216ENST00000530566 EIF3AQ14152 1382 aaKnown RBP11.37□□□□□ -0.59
POLB-216ENST00000530566 NHSQ6T4R5 1651 aa11.36□□□□□ -0.59
POLB-216ENST00000530566 FOXN1O15353 648 aa11.36□□□□□ -0.59
POLB-216ENST00000530566 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.36□□□□□ -0.59
POLB-216ENST00000530566 USB1Q9BQ65 265 aaKnown RBP11.36□□□□□ -0.59
POLB-216ENST00000530566 PRDM9Q9NQV7 894 aa11.36□□□□□ -0.59
POLB-216ENST00000530566 PRR36Q9H6K5 1346 aa11.35□□□□□ -0.59
POLB-216ENST00000530566 CCDC85CA6NKD9 419 aa11.35□□□□□ -0.59
POLB-216ENST00000530566 PKD2L1Q9P0L9 805 aa11.35□□□□□ -0.59
POLB-216ENST00000530566 USP6P35125 1406 aa11.35□□□□□ -0.59
POLB-216ENST00000530566 ABTB2Q8N961 1025 aa11.34□□□□□ -0.59
POLB-216ENST00000530566 KDM2BQ8NHM5 1336 aa11.34□□□□□ -0.59
POLB-216ENST00000530566 ROCK1Q13464 1354 aa11.33□□□□□ -0.6
POLB-216ENST00000530566 CTCFP49711 727 aaPredicted RBP11.33□□□□□ -0.6
POLB-216ENST00000530566 MMP16P51512 607 aa11.33□□□□□ -0.6
POLB-216ENST00000530566 AIDAQ96BJ3 306 aa11.33□□□□□ -0.6
POLB-216ENST00000530566 WNK3Q9BYP7 1800 aa11.32□□□□□ -0.6
POLB-216ENST00000530566 CICQ96RK0 1608 aaPredicted RBP11.32□□□□□ -0.6
POLB-216ENST00000530566 HOXA2O43364 376 aa11.32□□□□□ -0.6
POLB-216ENST00000530566 GCP02774 474 aa11.32□□□□□ -0.6
POLB-216ENST00000530566 COL23A1Q86Y22 540 aaPredicted RBP11.32□□□□□ -0.6
POLB-216ENST00000530566 CYP4X1Q8N118 509 aa11.32□□□□□ -0.6
POLB-216ENST00000530566 RRAGCQ9HB90 399 aa11.32□□□□□ -0.6
POLB-216ENST00000530566 FAM217BQ9NTX9 383 aaPredicted RBP11.32□□□□□ -0.6
POLB-216ENST00000530566 TUBGCP6Q96RT7 1819 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms