RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 FGD1P98174 961 aa14.04□□□□□ -0.16
USP35-207ENST00000530546 COPS6Q7L5N1 327 aa14.04□□□□□ -0.16
USP35-207ENST00000530546 KIF1BPQ96EK5 621 aa14.04□□□□□ -0.16
USP35-207ENST00000530546 DCAF5Q96JK2 942 aa14.04□□□□□ -0.16
USP35-207ENST00000530546 KDM4FA0A1W2PPD8 638 aa14.04□□□□□ -0.16
USP35-207ENST00000530546 MSNP26038 577 aaKnown RBP14.04□□□□□ -0.16
USP35-207ENST00000530546 ANP32BQ92688 251 aaKnown RBP14.04□□□□□ -0.16
USP35-207ENST00000530546 JARID2Q92833 1246 aaPredicted RBP14.04□□□□□ -0.16
USP35-207ENST00000530546 GBP4Q96PP9 640 aa14.04□□□□□ -0.16
USP35-207ENST00000530546 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.04□□□□□ -0.16
USP35-207ENST00000530546 STAP2Q9UGK3 403 aa14.04□□□□□ -0.16
USP35-207ENST00000530546 CIZ1Q9ULV3 898 aaPredicted RBP14.04□□□□□ -0.16
USP35-207ENST00000530546 DDIT3P35638 169 aa14.04□□□□□ -0.16
USP35-207ENST00000530546 LINS1Q8NG48 757 aa14.04□□□□□ -0.16
USP35-207ENST00000530546 ESYT1Q9BSJ8 1104 aa14.04□□□□□ -0.16
USP35-207ENST00000530546 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
USP35-207ENST00000530546 CHMLP26374 656 aa14.03□□□□□ -0.16
USP35-207ENST00000530546 HS1BP3Q53T59 392 aa14.03□□□□□ -0.16
USP35-207ENST00000530546 SUCLG2Q96I99 432 aa14.03□□□□□ -0.16
USP35-207ENST00000530546 MYD88Q99836 296 aa14.03□□□□□ -0.16
USP35-207ENST00000530546 GRM8O00222 908 aa14.03□□□□□ -0.16
USP35-207ENST00000530546 GAS2L3Q86XJ1 694 aa14.03□□□□□ -0.16
USP35-207ENST00000530546 DDX54Q8TDD1 881 aaKnown RBP14.02□□□□□ -0.16
USP35-207ENST00000530546 IGKV5-2P06315 115 aa14.02□□□□□ -0.17
USP35-207ENST00000530546 SNRPA1P09661 255 aaKnown RBP14.02□□□□□ -0.17
USP35-207ENST00000530546 A0A0U1RQG5 324 aaPredicted RBP14.01□□□□□ -0.17
USP35-207ENST00000530546 NEXNQ0ZGT2 675 aa14.01□□□□□ -0.17
USP35-207ENST00000530546 FMNL2Q96PY5 1086 aa14.01□□□□□ -0.17
USP35-207ENST00000530546 BICC1Q9H694 974 aaKnown RBP14.01□□□□□ -0.17
USP35-207ENST00000530546 COL18A1P39060 1754 aa14.01□□□□□ -0.17
USP35-207ENST00000530546 LARP1Q6PKG0 1096 aaKnown RBP14.01□□□□□ -0.17
USP35-207ENST00000530546 CPDO75976 1380 aa14.01□□□□□ -0.17
USP35-207ENST00000530546 HSP90AB4PQ58FF6 505 aa14.01□□□□□ -0.17
USP35-207ENST00000530546 SIL1Q9H173 461 aa14.01□□□□□ -0.17
USP35-207ENST00000530546 EVA1CP58658 441 aa14□□□□□ -0.17
USP35-207ENST00000530546 ZCRB1Q8TBF4 217 aaKnown RBP14□□□□□ -0.17
USP35-207ENST00000530546 TNPO1Q92973 898 aaKnown RBP14□□□□□ -0.17
USP35-207ENST00000530546 NASPP49321 788 aaPredicted RBP14□□□□□ -0.17
USP35-207ENST00000530546 CLASRPQ8N2M8 674 aaKnown RBP14□□□□□ -0.17
USP35-207ENST00000530546 PI4K2BQ8TCG2 481 aa14□□□□□ -0.17
USP35-207ENST00000530546 KAZALD1Q96I82 304 aa14□□□□□ -0.17
USP35-207ENST00000530546 WDR17Q8IZU2 1322 aa14□□□□□ -0.17
USP35-207ENST00000530546 ATP5J2-PTCD1G3V325 749 aa13.99□□□□□ -0.17
USP35-207ENST00000530546 PTCD1O75127 700 aaKnown RBP13.99□□□□□ -0.17
USP35-207ENST00000530546 ANKRD13DQ6ZTN6 518 aa13.99□□□□□ -0.17
USP35-207ENST00000530546 KLHDC4Q8TBB5 520 aa13.99□□□□□ -0.17
USP35-207ENST00000530546 IL25Q9H293 177 aa13.99□□□□□ -0.17
USP35-207ENST00000530546 N4BP2Q86UW6 1770 aaPredicted RBP13.99□□□□□ -0.17
USP35-207ENST00000530546 ST18O60284 1047 aa13.99□□□□□ -0.17
USP35-207ENST00000530546 NOL8Q76FK4 1167 aaKnown RBP13.99□□□□□ -0.17
USP35-207ENST00000530546 KLHL34Q8N239 644 aa13.99□□□□□ -0.17
USP35-207ENST00000530546 PALD1Q9ULE6 856 aa13.99□□□□□ -0.17
USP35-207ENST00000530546 SIPA1L3O60292 1781 aaPredicted RBP13.99□□□□□ -0.17
USP35-207ENST00000530546 SOS2Q07890 1332 aaPredicted RBP13.98□□□□□ -0.17
USP35-207ENST00000530546 NEURL1BA8MQ27 555 aa13.98□□□□□ -0.17
USP35-207ENST00000530546 MTX1Q13505 466 aa13.98□□□□□ -0.17
USP35-207ENST00000530546 UTP14CQ5TAP6 766 aaKnown RBP13.98□□□□□ -0.17
USP35-207ENST00000530546 FAM13BQ9NYF5 915 aa13.98□□□□□ -0.17
USP35-207ENST00000530546 HDAC5Q9UQL6 1122 aa13.98□□□□□ -0.17
USP35-207ENST00000530546 LMTK3Q96Q04 1460 aa13.98□□□□□ -0.17
USP35-207ENST00000530546 ZNF500O60304 480 aaPredicted RBP13.98□□□□□ -0.17
USP35-207ENST00000530546 IFIT2P09913 472 aaKnown RBP13.98□□□□□ -0.17
USP35-207ENST00000530546 NEK4P51957 841 aa13.98□□□□□ -0.17
USP35-207ENST00000530546 AOX1Q06278 1338 aa13.98□□□□□ -0.17
USP35-207ENST00000530546 DYNC1I1O14576 645 aa13.98□□□□□ -0.17
USP35-207ENST00000530546 MCCP23508 829 aa13.98□□□□□ -0.17
USP35-207ENST00000530546 SSFA2P28290 1259 aa13.98□□□□□ -0.17
USP35-207ENST00000530546 G3BP1Q13283 466 aaKnown RBP eCLIP13.98□□□□□ -0.17
USP35-207ENST00000530546 AACSQ86V21 672 aa13.98□□□□□ -0.17
USP35-207ENST00000530546 METTL22Q9BUU2 404 aaPredicted RBP13.98□□□□□ -0.17
USP35-207ENST00000530546 GCKRQ14397 625 aa13.97□□□□□ -0.17
USP35-207ENST00000530546 RAB3GAP1Q15042 981 aa13.97□□□□□ -0.17
USP35-207ENST00000530546 EPHA10Q5JZY3 1008 aa13.97□□□□□ -0.17
USP35-207ENST00000530546 XIRP1Q702N8 1843 aaKnown RBP13.97□□□□□ -0.17
USP35-207ENST00000530546 CCDC8Q9H0W5 538 aaPredicted RBP13.97□□□□□ -0.17
USP35-207ENST00000530546 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.97□□□□□ -0.17
USP35-207ENST00000530546 SCN11AQ9UI33 1791 aa13.97□□□□□ -0.17
USP35-207ENST00000530546 ADAMTS7Q9UKP4 1686 aa13.97□□□□□ -0.17
USP35-207ENST00000530546 CNTROBQ8N137 903 aa13.96□□□□□ -0.17
USP35-207ENST00000530546 PCDH11XQ9BZA7 1347 aa13.96□□□□□ -0.17
USP35-207ENST00000530546 PCDH11YQ9BZA8 1340 aa13.96□□□□□ -0.17
USP35-207ENST00000530546 C5P01031 1676 aa13.96□□□□□ -0.17
USP35-207ENST00000530546 IL2RBP14784 551 aa13.96□□□□□ -0.17
USP35-207ENST00000530546 CSPP1Q1MSJ5 1256 aa13.96□□□□□ -0.17
USP35-207ENST00000530546 CWC27Q6UX04 472 aaKnown RBP13.96□□□□□ -0.17
USP35-207ENST00000530546 UBE3BQ7Z3V4 1068 aa13.95□□□□□ -0.18
USP35-207ENST00000530546 SASH1O94885 1247 aa13.95□□□□□ -0.18
USP35-207ENST00000530546 LRP10Q7Z4F1 713 aa13.95□□□□□ -0.18
USP35-207ENST00000530546 ERC1Q8IUD2 1116 aa13.95□□□□□ -0.18
USP35-207ENST00000530546 ZGPATQ8N5A5 531 aaKnown RBP13.95□□□□□ -0.18
USP35-207ENST00000530546 NOL7Q9UMY1 257 aaKnown RBP13.95□□□□□ -0.18
USP35-207ENST00000530546 R3HCC1Q9Y3T6 440 aaKnown RBP13.95□□□□□ -0.18
USP35-207ENST00000530546 GLRX3O76003 335 aaKnown RBP13.95□□□□□ -0.18
USP35-207ENST00000530546 NCLP19338 710 aaKnown RBP13.95□□□□□ -0.18
USP35-207ENST00000530546 UPF3BQ9BZI7 483 aaKnown RBP13.95□□□□□ -0.18
USP35-207ENST00000530546 ECHDC1Q9NTX5 307 aa13.95□□□□□ -0.18
USP35-207ENST00000530546 UTYO14607 1347 aa13.94□□□□□ -0.18
USP35-207ENST00000530546 UQCRHLA0A096LP55 91 aa13.94□□□□□ -0.18
USP35-207ENST00000530546 A1BGP04217 495 aa13.94□□□□□ -0.18
USP35-207ENST00000530546 UQCRHP07919 91 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms