RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 CNBD1Q8NA66 436 aa27.66■■■□□ 2.02
TSPAN4-219ENST00000530404 ZC3H4Q9UPT8 1303 aaKnown RBP27.65■■■□□ 2.02
TSPAN4-219ENST00000530404 SNRPA1P09661 255 aaKnown RBP27.64■■■□□ 2.02
TSPAN4-219ENST00000530404 IFFO2Q5TF58 517 aa27.64■■■□□ 2.02
TSPAN4-219ENST00000530404 GLTPD2A6NH11 291 aa27.63■■■□□ 2.01
TSPAN4-219ENST00000530404 FSTL1Q12841 308 aa27.63■■■□□ 2.01
TSPAN4-219ENST00000530404 MIS18AQ9NYP9 233 aa27.63■■■□□ 2.01
TSPAN4-219ENST00000530404 PCNTO95613 3336 aa27.63■■■□□ 2.01
TSPAN4-219ENST00000530404 ST5P78524 1137 aa27.62■■■□□ 2.01
TSPAN4-219ENST00000530404 PDZRN3Q9UPQ7 1066 aa27.61■■■□□ 2.01
TSPAN4-219ENST00000530404 NBPF26B4DH59 902 aa27.6■■■□□ 2.01
TSPAN4-219ENST00000530404 NBPF10Q6P3W6 841 aaKnown RBP27.6■■■□□ 2.01
TSPAN4-219ENST00000530404 NBPF15Q8N660 670 aa27.6■■■□□ 2.01
TSPAN4-219ENST00000530404 HTATSF1O43719 755 aaKnown RBP27.58■■■□□ 2.01
TSPAN4-219ENST00000530404 NBPF5PQ86XG9 351 aaPredicted RBP27.58■■■□□ 2.01
TSPAN4-219ENST00000530404 SRGNP10124 158 aa27.57■■■□□ 2
TSPAN4-219ENST00000530404 TAF7Q15545 349 aaPredicted RBP27.57■■■□□ 2
TSPAN4-219ENST00000530404 PRPF40BQ6NWY9 871 aaKnown RBP27.57■■■□□ 2
TSPAN4-219ENST00000530404 SMC1BQ8NDV3 1235 aa27.57■■■□□ 2
TSPAN4-219ENST00000530404 FAM177BA6PVY3 158 aa27.56■■■□□ 2
TSPAN4-219ENST00000530404 VEGFAP15692 232 aaPredicted RBP27.56■■■□□ 2
TSPAN4-219ENST00000530404 STYK1Q6J9G0 422 aa27.56■■■□□ 2
TSPAN4-219ENST00000530404 CNKSR1Q969H4 720 aa27.56■■■□□ 2
TSPAN4-219ENST00000530404 ERFEQ4G0M1 354 aa27.55■■■□□ 2
TSPAN4-219ENST00000530404 CLEC4GQ6UXB4 293 aa27.55■■■□□ 2
TSPAN4-219ENST00000530404 MASTLQ96GX5 879 aa27.55■■■□□ 2
TSPAN4-219ENST00000530404 ZNF652Q9Y2D9 606 aa27.55■■■□□ 2
TSPAN4-219ENST00000530404 POTECB2RU33 542 aa27.54■■■□□ 2
TSPAN4-219ENST00000530404 HLFQ16534 295 aa27.54■■■□□ 2
TSPAN4-219ENST00000530404 TAOK3Q9H2K8 898 aa27.54■■■□□ 2
TSPAN4-219ENST00000530404 NIP7Q9Y221 180 aaKnown RBP eCLIP27.54■■■□□ 2
TSPAN4-219ENST00000530404 KLRG1Q96E93 195 aa27.53■■■□□ 2
TSPAN4-219ENST00000530404 THUMPD2Q9BTF0 503 aaKnown RBP27.53■■■□□ 2
TSPAN4-219ENST00000530404 NEFMP07197 916 aa27.52■■■□□ 2
TSPAN4-219ENST00000530404 NGEFQ8N5V2 710 aa27.52■■■□□ 2
TSPAN4-219ENST00000530404 PLEKHF1Q96S99 279 aa27.52■■■□□ 2
TSPAN4-219ENST00000530404 LTBP3Q9NS15 1303 aa27.5■■□□□ 1.99
TSPAN4-219ENST00000530404 DPY19L2Q6NUT2 758 aa27.5■■□□□ 1.99
TSPAN4-219ENST00000530404 NFE2L2Q16236 605 aa27.48■■□□□ 1.99
TSPAN4-219ENST00000530404 SCN4AP35499 1836 aa27.48■■□□□ 1.99
TSPAN4-219ENST00000530404 OLFM4Q6UX06 510 aa27.47■■□□□ 1.99
TSPAN4-219ENST00000530404 TPTE2Q6XPS3 522 aa27.47■■□□□ 1.99
TSPAN4-219ENST00000530404 DDNO94850 711 aaPredicted RBP27.46■■□□□ 1.99
TSPAN4-219ENST00000530404 NPR1P16066 1061 aa27.46■■□□□ 1.99
TSPAN4-219ENST00000530404 EIF4A1P60842 406 aaKnown RBP27.46■■□□□ 1.99
TSPAN4-219ENST00000530404 C7orf43Q8WVR3 580 aa27.46■■□□□ 1.99
TSPAN4-219ENST00000530404 RRP7AQ9Y3A4 280 aaKnown RBP27.46■■□□□ 1.99
TSPAN4-219ENST00000530404 SOGA3Q5TF21 947 aa27.45■■□□□ 1.98
TSPAN4-219ENST00000530404 PNISRQ8TF01 805 aaKnown RBP27.45■■□□□ 1.98
TSPAN4-219ENST00000530404 MYL6BP14649 208 aa27.44■■□□□ 1.98
TSPAN4-219ENST00000530404 CCDC93Q567U6 631 aa27.44■■□□□ 1.98
TSPAN4-219ENST00000530404 TTLL7Q6ZT98 887 aa27.44■■□□□ 1.98
TSPAN4-219ENST00000530404 MAPK8IP3Q9UPT6 1336 aa27.43■■□□□ 1.98
TSPAN4-219ENST00000530404 KLRG2A4D1S0 409 aaPredicted RBP27.43■■□□□ 1.98
TSPAN4-219ENST00000530404 JMYQ8N9B5 988 aa27.43■■□□□ 1.98
TSPAN4-219ENST00000530404 ABCC12Q96J65 1359 aa27.43■■□□□ 1.98
TSPAN4-219ENST00000530404 RGL2O15211 777 aa27.42■■□□□ 1.98
TSPAN4-219ENST00000530404 GTF2E1P29083 439 aaPredicted RBP27.42■■□□□ 1.98
TSPAN4-219ENST00000530404 NUTM1Q86Y26 1132 aa27.42■■□□□ 1.98
TSPAN4-219ENST00000530404 POTEIP0CG38 1075 aa27.41■■□□□ 1.98
TSPAN4-219ENST00000530404 POTEJP0CG39 1038 aa27.41■■□□□ 1.98
TSPAN4-219ENST00000530404 ZNF277Q9NRM2 450 aaPredicted RBP27.41■■□□□ 1.98
TSPAN4-219ENST00000530404 MAP3K15Q6ZN16 1313 aa27.41■■□□□ 1.98
TSPAN4-219ENST00000530404 ANKRD36CQ5JPF3 1778 aa27.4■■□□□ 1.98
TSPAN4-219ENST00000530404 GPTP24298 496 aa27.39■■□□□ 1.98
TSPAN4-219ENST00000530404 FKBP4Q02790 459 aaKnown RBP eCLIP27.39■■□□□ 1.981e-6■■■■□ 24.7
TSPAN4-219ENST00000530404 KIF6Q6ZMV9 814 aa27.39■■□□□ 1.98
TSPAN4-219ENST00000530404 ZBTB3Q9H5J0 574 aa27.39■■□□□ 1.98
TSPAN4-219ENST00000530404 LAMB2P55268 1798 aa27.39■■□□□ 1.98
TSPAN4-219ENST00000530404 UBN2Q6ZU65 1347 aa27.38■■□□□ 1.97
TSPAN4-219ENST00000530404 ERVV-1B6SEH8 477 aa27.37■■□□□ 1.97
TSPAN4-219ENST00000530404 PNNQ9H307 717 aaKnown RBP27.37■■□□□ 1.97
TSPAN4-219ENST00000530404 ZNF541Q9H0D2 1346 aa27.37■■□□□ 1.97
TSPAN4-219ENST00000530404 NYXQ9GZU5 481 aa27.36■■□□□ 1.97
TSPAN4-219ENST00000530404 TSPYL4Q9UJ04 414 aa27.36■■□□□ 1.97
TSPAN4-219ENST00000530404 CHADLQ6NUI6 762 aa27.35■■□□□ 1.97
TSPAN4-219ENST00000530404 ALDH1B1P30837 517 aa27.34■■□□□ 1.97
TSPAN4-219ENST00000530404 RIPK4P57078 832 aa27.33■■□□□ 1.97
TSPAN4-219ENST00000530404 SUSD4Q5VX71 490 aa27.33■■□□□ 1.97
TSPAN4-219ENST00000530404 SLC51AQ86UW1 340 aa27.33■■□□□ 1.97
TSPAN4-219ENST00000530404 RTKN2Q8IZC4 609 aa27.33■■□□□ 1.97
TSPAN4-219ENST00000530404 SYNE4Q8N205 404 aa27.33■■□□□ 1.97
TSPAN4-219ENST00000530404 TAF1P21675 1872 aa27.33■■□□□ 1.97
TSPAN4-219ENST00000530404 SNED1Q8TER0 1413 aa27.33■■□□□ 1.96
TSPAN4-219ENST00000530404 EIF2S2P20042 333 aaKnown RBP27.32■■□□□ 1.96
TSPAN4-219ENST00000530404 CRY2Q49AN0 593 aa27.32■■□□□ 1.96
TSPAN4-219ENST00000530404 ADAMTSL1Q8N6G6 1762 aa27.32■■□□□ 1.96
TSPAN4-219ENST00000530404 COL4A5P29400 1685 aa27.31■■□□□ 1.96
TSPAN4-219ENST00000530404 ANXA1P04083 346 aa27.31■■□□□ 1.96
TSPAN4-219ENST00000530404 IARSP41252 1262 aaKnown RBP27.31■■□□□ 1.96
TSPAN4-219ENST00000530404 COL13A1Q5TAT6 717 aaPredicted RBP27.31■■□□□ 1.96
TSPAN4-219ENST00000530404 RPGRQ92834 1020 aaKnown RBP27.3■■□□□ 1.96
TSPAN4-219ENST00000530404 L3MBTL3Q96JM7 780 aaPredicted RBP27.3■■□□□ 1.96
TSPAN4-219ENST00000530404 TAF1DQ9H5J8 278 aaPredicted RBP27.3■■□□□ 1.96
TSPAN4-219ENST00000530404 IQCA1LA6NCM1 817 aa27.29■■□□□ 1.96
TSPAN4-219ENST00000530404 PROSER3Q2NL68 480 aa27.29■■□□□ 1.96
TSPAN4-219ENST00000530404 GIGYF2Q6Y7W6 1299 aaKnown RBP27.29■■□□□ 1.96
TSPAN4-219ENST00000530404 ZNF34Q8IZ26 560 aa27.29■■□□□ 1.96
TSPAN4-219ENST00000530404 IBTKQ9P2D0 1353 aaPredicted RBP27.29■■□□□ 1.96
TSPAN4-219ENST00000530404 RIC1Q4ADV7 1423 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms